BAC Information

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BAC

Clone NameB6Ng01-048C02
Chromosome3 (Build37)
Map Location 117,918,292 - 117,919,317
singlet/doubletsinglet
Overlap genenone
Upstream geneD3Bwg0562e, 4833424O15Rik, EG668759, Snx7, LOC100043260
Downstream geneDpyd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048C02.bB6Ng01-048C02.g
ACCDH872785DH872786
length9901,202
definitionDH872785|Mus musculus domesticus DNA, BAC clone: B6Ng01-048C02, 5' end.DH872786|Mus musculus domesticus DNA, BAC clone: B6Ng01-048C02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggccagtctgagacttctgactgtctcacaaagaaataaata
agagagaaagatagatggatggatagatagatagatagataggtagatag
atagatagatagatagatagatagatagatagatagatagatagatagat
agacagacagaaagacagaaagacatctgtgtagacagaaatggctggct
ggctggatagataaagatagagtctttaatcctgtcgttcccccacccaa
cacctacccacacacatacaagcagtcataaacatacttgtgtatctgta
cacaagtgaattaattaaataactaagttcactatctatgatgtcttgga
tacccttttcttggttgtatgacctacgattatctttcaaagtagcttat
ctttgtacttacattagacagctttgcctttgtttcccctccccagcgtg
tcatgtaagtacccaggaaatacattttagtctagagataagcatttttt
ttatattataaactagaaaataatttgcaactcctggctgctatggtctt
cagcatgtttccagtgacttgaattttagtatgcaaagatttaaaagttt
tcctatgaatgttcaaaaagtatttattgtattttgaatgtttttcctta
aaatgttataccccacaaataataataataataataataataataattat
aataaaaattatggacttaggccccattaatatactcttataatgattac
atttttaaaaataatcatgactattctgtttaagattgattaattacttc
tttactttccctagaggttctctgggccattgggattcgaatcccatctc
attatttctaggtcacattttcgtatttccgcttctgactcttcctgaaa
tcattggctgaaattaattctactgtccactcatgccagagtcaggcata
cgagtggttcactctcctgccatgtggcttgacagcattt
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
ggagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcagtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacagggagc
caaaccatccagtggagaaagacagcattttcacatgtgctgcacactgt
gtatcatgtagagatgcgatcgatcatacttatctctgtactagtcaatc
tagtgatcaggactcaataaacaaagacctgaactagaggagaagtggaa
agcttgagattggcccagggaatcctgacgaacagcattgctggtctgta
gatcggatgcaatggacttgatccaagctctcagcagactgtcttaacaa
gacccacgcactggaggacttactacatcttatatgcagataagtgagat
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_117918292_117919317
seq2: B6Ng01-048C02.b_47_1036

seq1  GAATTCAAGGCCAGTCTGAGACTTCTGACTGTCTCACAAAGAAATAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGTCTGAGACTTCTGACTGTCTCACAAAGAAATAAATA  50

seq1  AGAGAGAAAGATAGATGGATGGATAGATAGATAGATAGATAGGTAGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAAGATAGATGGATGGATAGATAGATAGATAGATAGGTAGATAG  100

seq1  ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  150

seq1  AGACAGACAGAAAGACAGAAAGACATCTGTGTAGACAGAAATGGCTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGACAGAAAGACAGAAAGACATCTGTGTAGACAGAAATGGCTGGCT  200

seq1  GGCTGGATAGATAAAGATAGAGTCTTTAATCCTGTCGTTCCCCCACCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGATAGATAAAGATAGAGTCTTTAATCCTGTCGTTCCCCCACCCAA  250

seq1  CACCTACCCACACACATACAAGCAGTCATAAACATACTTGTGTATCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACCCACACACATACAAGCAGTCATAAACATACTTGTGTATCTGTA  300

seq1  CACAAGTGAATTAATTAAATAACTAAGTTCACTATCTATGATGTCTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTGAATTAATTAAATAACTAAGTTCACTATCTATGATGTCTTGGA  350

seq1  TACCCTTTTCTTGGTTGTATGACCTACGATTATCTTTCAAAGTAGCTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTTTTCTTGGTTGTATGACCTACGATTATCTTTCAAAGTAGCTTAT  400

seq1  CTTTGTACTTACATTAGACAGCTTTGCCTTTGTTTCCCCTCCCCAGCGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTACTTACATTAGACAGCTTTGCCTTTGTTTCCCCTCCCCAGCGTG  450

seq1  TCATGTAAGTACCCAGGAAATACATTTTAGTCTAGAGATAAGCATTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAAGTACCCAGGAAATACATTTTAGTCTAGAGATAAGCATTTTTT  500

seq1  TTATATTATAAACTAGAAAATAATTTGCAACTCCTGGCTGCTATGGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTATAAACTAGAAAATAATTTGCAACTCCTGGCTGCTATGGTCTT  550

seq1  CAGCATGTTTCCAGTGACTTGAATTTTAGTATGCAAAGATTTAAAAG-TT  599
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGCATGTTTCCAGTGACTTGAATTTTAGTATGCAAAGATTTAAAAGTTT  600

seq1  TCCTATGAATGTTCAAAAAGTATTTATTGTATTTTGAATGTTTTTCCTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGAATGTTCAAAAAGTATTTATTGTATTTTGAATGTTTTTCCTTA  650

seq1  AAATGTTATACCCCACAAAATAATAATAATAATAATAATAATAATAATAA  699
      |||||||||||||||| ||||||||||||||||||||||||||||||| |
seq2  AAATGTTATACCCCAC-AAATAATAATAATAATAATAATAATAATAATTA  699

seq1  TAATAAAAATAATGGACTTAGGCCCCATTAATATACTCTTTATAATGATT  749
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  TAATAAAAATTATGGACTTAGGCCCCATTAATATACTC-TTATAATGATT  748

seq1  ACATTTTTAAAAATAATCATGACTATTCTTGTTTAAGATTGATTAATTTA  799
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  ACATTTTTAAAAATAATCATGACTATTC-TGTTTAAGATTGATTAA-TTA  796

seq1  CTTCTTTACTTTTCCCTAGAGGTTCTCCTGGGCCATTTGGATTCAGAATC  849
      ||||||||| |||||||||||||||| |||||||||| |||||| |||||
seq2  CTTCTTTAC-TTTCCCTAGAGGTTCT-CTGGGCCATTGGGATTC-GAATC  843

seq1  CCAATTCTGCATTATTTCTAGGTCACATTTTCTGTATTTCCGTCTTCTGA  899
      |||  ||| ||||||||||||||||||||||| ||||||||| |||||||
seq2  CCA--TCT-CATTATTTCTAGGTCACATTTTC-GTATTTCCG-CTTCTGA  888

seq1  CCTCTTCACTGAAAATTCAATTGTCTGAATATTTATATTCTACATGTCCC  949
       |||||| ||||||  || |||| ||||| |||   ||||||| |||  |
seq2  -CTCTTC-CTGAAA--TC-ATTGGCTGAA-ATT--AATTCTAC-TGT--C  927

seq1  CACTCATGCACAGAGCTCCAGGCATACAGAGTTGGTTCCCACCTTCCTTC  999
      ||||||||| |||||   ||||||||| ||| ||||||        ||  
seq2  CACTCATGC-CAGAG--TCAGGCATAC-GAG-TGGTTC-------ACTCT  965

seq1  CCTGCACATGTGGCTTTGACAGCATTT  1026
      ||||| |||||||| ||||||||||||
seq2  CCTGC-CATGTGGC-TTGACAGCATTT  990