BAC Information

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BAC

Clone NameB6Ng01-048D24
Chromosome3 (Build37)
Map Location 132,149,563 - 132,296,781
singlet/doubletdoublet
Overlap genenone
Upstream genePapss1, Olfr375-ps1, Dkk2, LOC100039018
Downstream geneEG433653, LOC668857, Scye1, A630047E20Rik, LOC668858, Npnt, Gstcd, Ints12, 9130221D24Rik, Ppa2, E130014J05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048D24.bB6Ng01-048D24.g
ACCDH872865DH872866
length1,021418
definitionDH872865|Mus musculus domesticus DNA, BAC clone: B6Ng01-048D24, 5' end.DH872866|Mus musculus domesticus DNA, BAC clone: B6Ng01-048D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,295,770 - 132,296,781)(132,149,563 - 132,149,980)
sequence
gaattcaggactgagattacagagttcaggaatctgtggaaaggatttaa
aatctgcttactgtggaagatgtagaaacagaacaagagaagaaacagct
agttcagctttctttcttttctcttttattgaattttcaatttatctatt
tttatatctatgagtattttgcctggatgaatgtgtatgcaccacatgca
tgcctgatgcctatagaggccagaagatgggtgctggatcctttggaact
ggaattaaggatggtggtgagctaccaagtatgaatgccaggaatcatat
gctggccctctggaagaacagccagttctcttagccactgcattatctct
ccagcatcccctaatcttttgaaacgagagctcaggctgtccttgaactc
actatgtggcttggactgacttcaagcaattcatctgtaccctgtctcaa
acgcagagattgcagatatgaagcatcatggcccattcagctttacttaa
tttaatttaattttaaatacaagacttagaattaaaagagattttagcat
agttaaagttgtcacttgtgtttttaatcttagccattctgacaggtgta
agatggattctcaaagtcattttggttttcagttccctgattgccaagga
tgctgaacatttctttaagtgtttctcagtcatttgagattcctctgttg
agaattctctgtttagatctgtacctcattttaaaatagtttgttgagtt
ctttagatgtggagttagttggtaaagagcgttccccaatctgtgggctg
ctgtttgtcctactgacagtgtcttttgctttacagaagctttttagtat
taattgtgtgcctgcacttttgatgttctgttcagatgtgtcttttgtgc
catggttcagagtatccccactttctcttcagtgcatctggtgttatgtg
atgtcttttctcactgggcttgattttgtgcaggtgatagatgtggacta
ttccattcttctattaacatc
gaattccaaagcaataccttcaaaaggtgacaaataggcttatagatggt
gttatgaaatgattataaaagaactgtatgtaggacaaatgaaaagacta
ctatctaaaatccacattagctgtatataatgaacagtgcagggacccac
catagtaactctttgtattctgtctaagctccaaatccacagttaccaag
caatagccaggtaggtctgacctactataaaaggggatgcttgcccctct
ctctctctctctctctctctctctctctctctctctgtgtgtctctctgt
ctgtctctttccctttctctcttcattcccttccctctctctctccatct
gctcagggggggtctctatacctctatttctctactctctcgatctctga
cctcttctccctctacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132295770_132296781
seq2: B6Ng01-048D24.b_66_1063 (reverse)

seq1  GATGTTATATAGAAGAATGTGAATAGATCCACATCTATCACCCTGCACAA  50
      ||||||| ||||||||||| |||||| ||||||||||||| |||||||||
seq2  GATGTTA-ATAGAAGAATG-GAATAG-TCCACATCTATCA-CCTGCACAA  46

seq1  AATTCAAGCCCAAGTGGAGAAAAGACATCAACATAACACCAGATGCACTG  100
      || |||||||| ||| ||||||||||||| ||||||||||||||||||||
seq2  AA-TCAAGCCC-AGT-GAGAAAAGACATC-ACATAACACCAGATGCACTG  92

seq1  AAGAGAAAGTGGGGGATACTCTTGAACCCATTGGCACAAAAGACAACATC  150
      |||||||||| |||||||||| ||||||   ||||||||||||| |||| 
seq2  AAGAGAAAGT-GGGGATACTC-TGAACC--ATGGCACAAAAGAC-ACAT-  136

seq1  CTGAACAGAACATCAATAGTGCAGGCACACAATTAATACTAAAAAGCTTC  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTGAACAGAACATCAAAAGTGCAGGCACACAATTAATACTAAAAAGCTTC  186

seq1  TGTAAAGCAAAAGACACTGTCAGTAGGACAAACAGCAGCCCACAGATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGCAAAAGACACTGTCAGTAGGACAAACAGCAGCCCACAGATTGG  236

seq1  GGAACGCTCTTTACCAACTAACTCCACATCTAAAGAACTCAACAAACTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGCTCTTTACCAACTAACTCCACATCTAAAGAACTCAACAAACTAT  286

seq1  TTTAAAATGAGGTACAGATCTAAACAGAGAATTCTCAACAGAGGAATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATGAGGTACAGATCTAAACAGAGAATTCTCAACAGAGGAATCTC  336

seq1  AAATGACTGAGAAACACTTAAAGAAATGTTCAGCATCCTTGGCAATCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTGAGAAACACTTAAAGAAATGTTCAGCATCCTTGGCAATCAGG  386

seq1  GAACTGAAAACCAAAATGACTTTGAGAATCCATCTTACACCTGTCAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAAAACCAAAATGACTTTGAGAATCCATCTTACACCTGTCAGAAT  436

seq1  GGCTAAGATTAAAAACACAAGTGACAACTTTAACTATGCTAAAATCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAGATTAAAAACACAAGTGACAACTTTAACTATGCTAAAATCTCTT  486

seq1  TTAATTCTAAGTCTTGTATTTAAAATTAAATTAAATTAAGTAAAGCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTAAGTCTTGTATTTAAAATTAAATTAAATTAAGTAAAGCTGAA  536

seq1  TGGGCCATGATGCTTCATATCTGCAATCTCTGCGTTTGAGACAGGGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCATGATGCTTCATATCTGCAATCTCTGCGTTTGAGACAGGGTACA  586

seq1  GATGAATTGCTTGAAGTCAGTCCAAGCCACATAGTGAGTTCAAGGACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATTGCTTGAAGTCAGTCCAAGCCACATAGTGAGTTCAAGGACAGC  636

seq1  CTGAGCTCTCGTTTCAAAAGATTAGGGGATGCTGGAGAGATAATGCAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTCTCGTTTCAAAAGATTAGGGGATGCTGGAGAGATAATGCAGTG  686

seq1  GCTAAGAGAACTGGCTGTTCTTCCAGAGGGCCAGCATATGATTCCTGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAGAACTGGCTGTTCTTCCAGAGGGCCAGCATATGATTCCTGGCA  736

seq1  TTCATACTTGGTAGCTCACCACCATCCTTAATTCCAGTTCCAAAGGATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACTTGGTAGCTCACCACCATCCTTAATTCCAGTTCCAAAGGATCC  786

seq1  AGCACCCATCTTCTGGCCTCTATAGGCATCAGGCATGCATGTGGTGCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCATCTTCTGGCCTCTATAGGCATCAGGCATGCATGTGGTGCATA  836

seq1  CACATTCATCCAGGCAAAATACTCATAGATATAAAAATAGATAAATTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCATCCAGGCAAAATACTCATAGATATAAAAATAGATAAATTGAA  886

seq1  AATTCAATAAAAGAGAAAAGAAAGAAAGCTGAACTAGCTGTTTCTTCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATAAAAGAGAAAAGAAAGAAAGCTGAACTAGCTGTTTCTTCTCT  936

seq1  TGTTCTGTTTCTACATCTTCCACAGTAAGCAGATTTTAAATCCTTTCCAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTTTCTACATCTTCCACAGTAAGCAGATTTTAAATCCTTTCCAC  986

seq1  AGATTCCTGAAC  1012
      ||||||||||||
seq2  AGATTCCTGAAC  998

seq1: chr3_132149563_132149980
seq2: B6Ng01-048D24.g_65_482

seq1  GAATTCCAAAGCAATACCTTCAAAAGGTGACAAATAGGCTTATAGATGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGCAATACCTTCAAAAGGTGACAAATAGGCTTATAGATGGT  50

seq1  GTTATGAAATGATTATAAAAGAACTGTATGTAGGACAAATGAAAAGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGAAATGATTATAAAAGAACTGTATGTAGGACAAATGAAAAGACTA  100

seq1  CTATCTAAAATCCACATTAGCTGTATATAATGAACAGTGCAGGGACCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTAAAATCCACATTAGCTGTATATAATGAACAGTGCAGGGACCCAC  150

seq1  CATAGTAACTCTTTGTATTCTGTCTAAGCTCCAAATCCACAGTTACCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAACTCTTTGTATTCTGTCTAAGCTCCAAATCCACAGTTACCAAG  200

seq1  CAATAGCCAGGTAGGTCTGACCTACTATAAAAGGGGATGCTTGCCCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCCAGGTAGGTCTGACCTACTATAAAAGGGGATGCTTGCCCCTCT  250

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCACTCATG  300
      |||||||||||||||||||||||||||||||||||| |   || |||   
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTCTCTCTGT  300

seq1  CTTTCCCTTCCCCCTTCTCTCCTCATTCCCTTCCCCCTCTCTCTCCACAT  350
      || || ||| ||| ||||||| ||||||||||||| |||||||||||  |
seq2  CTGTCTCTTTCCCTTTCTCTCTTCATTCCCTTCCCTCTCTCTCTCCATCT  350

seq1  GCTCATGGCCGGTCTCTATTCCTCTACTTCTCTACTTTCTCTATCTCTGA  400
      ||||| ||  ||||||||| |||||| ||||||||| |||| ||||||||
seq2  GCTCAGGGGGGGTCTCTATACCTCTATTTCTCTACTCTCTCGATCTCTGA  400

seq1  CTTTCTCTCCCTCTACTA  418
      | |  |||||||||||||
seq2  CCTCTTCTCCCTCTACTA  418