BAC Information

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BAC

Clone NameB6Ng01-048J07
Chromosome3 (Build37)
Map Location 68,135,896 - 68,136,447
singlet/doubletsinglet
Overlap genenone
Upstream geneRsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412, EG208426, EG545531
Downstream geneLOC631379, Schip1, Il12a, LOC639530, 1110032F04Rik, Ift80, Smc4, Trim59, LOC667272, Kpna4, Arl14, Ppm1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048J07.bB6Ng01-048J07.g
ACCDH873097DH873098
length543980
definitionDH873097|Mus musculus domesticus DNA, BAC clone: B6Ng01-048J07, 5' end.DH873098|Mus musculus domesticus DNA, BAC clone: B6Ng01-048J07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctggagctggccagccagtgtagccaaatctgtgagttctgatttcagga
agaacccctgattaaaaaaaaaaaaaaaaaaaaaaagagagattggggtt
gactgaggaagacacctaatgctattctgtcctctgcatgcatgcacacc
catccacatgcacatgtgtgcacacacaagaacacacacagggcccccaa
tggaggagctagagaaagtacccaaggatctgaaggggtctgcaacccta
taggtggaacaacaatatgaactaaccagtacccccagagctcatgtctc
tagctgcatatatagcaaaagatggcctagtcagccatcattgggaagaa
aggccccttggtcttgcaaactttatatgcctcagtacaggggaatgcca
ggaccaagaagtgggagtgcgtgggtagaagaacagggggggagggtata
ggggacttctaagatagcgttttattgtaattgaagaaaatttcttataa
aaaagagaattaaaaaaagagccaccttgttctccctctatat
gaattccatgcaagtcacacacaggacacagatgttctgctgtttcatca
cctgtgtgtagctctggggatactgaaccgctctgtaggacaaagtgtcc
tagacgtagaacatctggatcttgtttccagcccagtctctaaacaactt
tatgaccacaatttgcagatgaaagagggcggactgcctgttgaaggcat
ttggcaaatagtaggggttggtttaatgtctggaagaaaacaggcttctt
ccagtctagagaccctatggatttcatcctagaaaagatgggaaatggaa
tgcaaataatgtctctcagtctttttatcaccttccttatcaaaagatgc
cgcgtctgccccaccccgacccctttgccccttgttgtggcaggcagcag
gctggagagttggctctgaagtcatgacagcaggagggctggtccctccc
cttgccagctctagcacccaggagagtgggccctgcacctcacctgggca
gcacagaactagccctggtggctaaggcacaggtaagctggccttgagaa
catggagagcaggagagctaactggccccttgctggctgcaagattcagg
agatgctgaagagttctctatggtactgcaggctcaggagagagggcaga
atgaccaactcagctatggcccaggcccagatccagggctctgagttggc
ttaccccaacatctactcccatagatgatctgctggagtactgaaagggt
cagttgtgcagactgcaggatctccctgacactgaacaacaatgggatgt
ctgagagaggtctgatgagaatgcagtattgacggtatagcagaagccag
aggcctcaaaacaaacagtggctcattgcaatgacatttgcaagtagatg
tgtgacaaagagtatactgtgtgacacacacagcttcacacagatttttt
atctatttcagtttctttggggggggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_68135896_68136447
seq2: B6Ng01-048J07.b_47_595

seq1  GAATTCCTGGAGCTGGCCAGCCAGTGTAGCCAAATCTGTGAGTTCTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAGCTGGCCAGCCAGTGTAGCCAAATCTGTGAGTTCTGATT  50

seq1  TCAGGAAGAACCCCTGATTAAAAAAAAAAAAAAAAAAAAAAAGAGAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGAACCCCTGATTAAAAAAAAAAAAAAAAAAAAAAAGAGAGATT  100

seq1  GGGGTTGACTGAGGAAGACACCTAATGCTATTCTGTCCTCTGCATGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTGACTGAGGAAGACACCTAATGCTATTCTGTCCTCTGCATGCATG  150

seq1  CACACCCATCCACATGCACATGTGTGCACACACAAGAACACACACAGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCATCCACATGCACATGTGTGCACACACAAGAACACACACAGGGC  200

seq1  CCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGATCTGAAGGGGTCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGATCTGAAGGGGTCTGCA  250

seq1  ACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTCA  300

seq1  TGTCTCTAGCTGCATATATAGCAGAAGATGGCCTAGTCAGCCATCATTGG  350
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGTCTCTAGCTGCATATATAGCAAAAGATGGCCTAGTCAGCCATCATTGG  350

seq1  GAAGAAAGGCCCCTTGGTCTTGCAAACTTTATATGCCTCAGTACAGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGCCCCTTGGTCTTGCAAACTTTATATGCCTCAGTACAGGGGA  400

seq1  ATGCCAGGACCAAGAAGTGGGAGTGCGTGGGTAGAAGAACAGGGGGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGGACCAAGAAGTGGGAGTGCGTGGGTAGAAGAACAGGGGGGGAG  450

seq1  GGTATAGGGGACTTCTAAGATAGCGTTTGAAATGTAAATGAAGAAAATAT  500
      ||||||||||||||||||||||||||||  | ||||| |||||||||| |
seq2  GGTATAGGGGACTTCTAAGATAGCGTTT-TATTGTAATTGAAGAAAATTT  499

seq1  CTAATAAAAAAGAGAATTAAAAAAAGAGCACACATAGTCTCTCCCTCTAT  550
      || |||||||||||||||||||||||||| ||| | || |||||||||||
seq2  CTTATAAAAAAGAGAATTAAAAAAAGAGC-CACCTTGT-TCTCCCTCTAT  547

seq1  AT  552
      ||
seq2  AT  549