BAC Information

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BAC

Clone NameB6Ng01-049C06
Chromosome3 (Build37)
Map Location 12,193,935 - 12,194,477
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667999
Downstream geneEG621965, LOC100039798, EG668033, LOC668037
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049C06.bB6Ng01-049C06.g
ACCDH873489DH873490
length1,206537
definitionDH873489|Mus musculus domesticus DNA, BAC clone: B6Ng01-049C06, 5' end.DH873490|Mus musculus domesticus DNA, BAC clone: B6Ng01-049C06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacaggataaaagcaatgtacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaaggag
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgaaat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaaa
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccttg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggaccaatttgcaaattcatctggaataaaaacaaaaa
accgaggatagcaaaaattcttctcaaggataaaagaacctctggtggaa
tcaccatgcctgacctaaagctttactacagagcaattgtgataaatact
gcatggtactggtatagagacagacaagtagaccaatggaatagaagtga
agacccagaaatgaacccactcaccatggtcacttgatctcgacaggagc
taaaccatccagtgagaaagacagcatttcacatgtgctgcacactggtg
tatcatgtagagatgcgatcgatcatactatctctgtactaggtcaatct
agtgatcagactcccataaccagagaaactgaacttaaaggagaaagtgg
gtaagcttgaaatgggcccgggaagtctgacgacagaattgctttgcgtg
aatcagaaatgacaatggactatgactcaagtctcagcagaatcgcttta
gcaagacccatgagctcttcacatggcatttccattaggatcaagtgagc
tcgatc
ccttagattttggcatcttagcccaaggaagtttgtttaacagagataca
gtctctggtctttgagccaaaataacctccttggtcttttaatgctactt
tctctatctaaaactagtttctttaagccaaagagctaaacattgttatt
attgactgtatcttttctattttattttattttattttatgttattttat
aatatgttattttaattaattaattagttagttaattaattaattaatta
attaatttttgggtttttgagatagaatttctctggatagccctggctgt
cctgaaactcactctgtataccagggtggcctcgaactcagaaatccacc
tgcctctgcctcccaagtgctggaattaaaggcatgtgctaccactgccc
agctgtattttttctatttttaaggataatttgagttacagaagtatctg
taaaggtatggaaacatgagtacatatgccgaaagcatctagtgggcata
aattttgaactgtcttatatgagtatgggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_12193935_12194477
seq2: B6Ng01-049C06.g_65_607

seq1  GAATTCCCTTAGATTTTGGCATCTTAGCCCAAGGAAGTTTGTTTAACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTAGATTTTGGCATCTTAGCCCAAGGAAGTTTGTTTAACAGA  50

seq1  GATACAGTCTCTGGTCTTTGAGCCAAAATAACCTCCTTGGTCTTTTAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGTCTCTGGTCTTTGAGCCAAAATAACCTCCTTGGTCTTTTAATG  100

seq1  CTACTTTCTCTATCTAAAACTAGTTTCTTTAAGCCAAAGAGCTAAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCTCTATCTAAAACTAGTTTCTTTAAGCCAAAGAGCTAAACATT  150

seq1  GTTATTATTGACTGTATCTTTTCTATTTTATTTTATTTTATTTTATGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTATTGACTGTATCTTTTCTATTTTATTTTATTTTATTTTATGTTA  200

seq1  TTTTATAATATGTTATTTTAATTAATTAATTAGTTAGTTAATTAATTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATATGTTATTTTAATTAATTAATTAGTTAGTTAATTAATTAAT  250

seq1  TAATTAATTAATTTTTGGGTTTTTGAGATAGAATTTCTCTGGATAGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATTAATTTTTGGGTTTTTGAGATAGAATTTCTCTGGATAGCCCT  300

seq1  GGCTGTCCTGAAACTCACTCTGTATACCAGGGTGGCCTCGAACTCAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCCTGAAACTCACTCTGTATACCAGGGTGGCCTCGAACTCAGAAA  350

seq1  TCCACCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGTGCTACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATGTGCTACCA  400

seq1  CTGCCCAGCTGTATTTTTTCTATTTTTAAGGATAATTTGAGTTACAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAGCTGTATTTTTTCTATTTTTAAGGATAATTTGAGTTACAGAAG  450

seq1  TATCTGTAAAGGTATGGAAACATGAGTACATATGCCGAAAGCATCTAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTAAAGGTATGGAAACATGAGTACATATGCCGAAAGCATCTAGTG  500

seq1  GGCATAAATTTTGAACTGTCTTATATGAGTATGGGGGGGGGGA  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAAATTTTGAACTGTCTTATATGAGTATGGGGGGGGGGA  543