BAC Information

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BAC

Clone NameB6Ng01-049N02
Chromosome3 (Build37)
Map Location 119,577,527 - 119,578,568
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049N02.bB6Ng01-049N02.g
ACCDH873967DH873968
length1,046710
definitionDH873967|Mus musculus domesticus DNA, BAC clone: B6Ng01-049N02, 5' end.DH873968|Mus musculus domesticus DNA, BAC clone: B6Ng01-049N02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttgttgttgctagtgttaaatcaaacgtaatattgaattggt
ttgttcaaatgatgactattttaaatacatgcagggggaaatcatgatgc
cttaaaaactctttaaaatagtgtgtttcttgttaaatacgaaaaattac
catcattttgctgattgtagaacatcacacacaagataaaataattttag
atttccaaaatagatctttcagagtgcctttaaaacatccacatagtcta
aaaatcattaaacacaagcacttggagatttttttcctaggtcatttagg
gagtattccctgagttgctttaaaataaaaataataaaagaaacttcacg
tgtattataattactcagaacacagtagaataaagagactgaaaaattct
ttcacagttgaactaaattgtttaacacatgaaatgtctaattgacaatt
ctgtaccaaagtgtaaatttgtcaaggaaggatacacaacaagtttcttt
ttctttctttccttcttcttcttttttttttcctttaacatctcagcaag
tgctgttgtgatttggatctattacttctgaatattgcatgaagctgaca
agcacttgtcatttaaagaccacatgggagggcatttagttttccattta
gacataataacacattatgcaaatcaggctgcaaggagagctggaggctg
ccatgaaataaactgtcaaatgcaagttctaataaatgaacattttcttt
atagattgtcttaatttggggagttgaaaaaaaatatgcttggctgtgcg
aatcagggaccttaagtgtggtgttttgtagagcttcagtgttgacttga
ccaccaccattccattcctttctaattaatatcaaaagtttctctccagg
aacttcctcaaactgagaattccacccccccaaaaccaattttaaataaa
ttgcattcctcccatatctggttccaggaccatttgagtgtggaataatc
ctacatggtttaccccaccttccaatttgtgctgcctatcggacga

ttatcccatggcaatctgataagatacaagggtctatttcaattttcttg
catctgttaaggcttgctttgtgactgaatatattgccaattttggagat
ggttccatgaggtcctaaaaagaaggtatattcttttgtgtttagatgaa
atgctctgtaggtaactgttagtccatttggttcttaacttctgttagtt
tcattatttctgtttcaatgacttctgaatttatgagagttgggtgttga
aatctcccacaattaatgtatggacttcaatgtgtgatttaggctttagt
aatgtttcttacaaatgtgggtacactttcatttgggacatatattttca
gaattgagatttcatcttgaattttttttcttaatgtttatggagtgtcg
ttccccatatcttttgattagttttgatttaaagtctattttattagaat
agatactccagcatgtttcttaggtttgtttgtttggaaaaaccttttcc
agacttttcctctaaggtagtgtctatctttgtgactgaggtgtatttct
catatgcacccaatgatgaatccagtttatgcatccataccattagcctg
tatctttttactgatgaattgagtccattgctattgaaagatattaatga
tcaatggttacagttcttattattctgttggtggtggcagtggtagtggt
ggtaatggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119577527_119578568
seq2: B6Ng01-049N02.b_42_1087

seq1  GAATTCAGTTGTTGTTGCTAGTGTTAAATCAAACGTAATATTGAATTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGTTGTTGCTAGTGTTAAATCAAACGTAATATTGAATTGGT  50

seq1  TTGTTCAAATGATGACTATTTTAAATACATGCAGGGGGAAATCATGATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAAATGATGACTATTTTAAATACATGCAGGGGGAAATCATGATGC  100

seq1  CTTAAAAACTCTTTAAAATAGTGTGTTTCTTGTTAAATACGAAAAATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAACTCTTTAAAATAGTGTGTTTCTTGTTAAATACGAAAAATTAC  150

seq1  CATCATTTTGCTGATTGTAGAACATCACACACAAGATAAAATAATTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTTTGCTGATTGTAGAACATCACACACAAGATAAAATAATTTTAG  200

seq1  ATTTCCAAAATAGATCTTTCAGAGTGCCTTTAAAACATCCACATAGTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAAAATAGATCTTTCAGAGTGCCTTTAAAACATCCACATAGTCTA  250

seq1  AAAATCATTAAACACAAGCACTTGGAGATTTTTTTCCTAGGTCATTTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATTAAACACAAGCACTTGGAGATTTTTTTCCTAGGTCATTTAGG  300

seq1  GAGTATTCCCTGAGTTGCTTTAAAATAAAAATAATAAAAGAAACTTCACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTCCCTGAGTTGCTTTAAAATAAAAATAATAAAAGAAACTTCACG  350

seq1  TGTATTATAATTACTCAGAACACAGTAGAATAAAGAGACTGAAAAATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATAATTACTCAGAACACAGTAGAATAAAGAGACTGAAAAATTCT  400

seq1  TTCACAGTTGAACTAAATTGTTTAACACATGAAATGTCTAATTGACAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGTTGAACTAAATTGTTTAACACATGAAATGTCTAATTGACAATT  450

seq1  CTGTACCAAAGTGTAAATTTGTCAAGGAAGGATACACAACAAGTTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCAAAGTGTAAATTTGTCAAGGAAGGATACACAACAAGTTTCTTT  500

seq1  TTCTTTCTTTCCTTCTTCTTCTTTTTTTTTTCCTTTAACATCTCAGCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCCTTCTTCTTCTTTTTTTTTTCCTTTAACATCTCAGCAAG  550

seq1  TGCTGTTGTGATTTGGATCTATTACTTCTGAATATTGCATGAAGCTGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGTGATTTGGATCTATTACTTCTGAATATTGCATGAAGCTGACA  600

seq1  AGCACTTGTCATTTAAAGACCACATGG--AGGCATTTAGTTTTCCATTTA  648
      |||||||||||||||||||||||||||   ||||||||||||||||||||
seq2  AGCACTTGTCATTTAAAGACCACATGGGAGGGCATTTAGTTTTCCATTTA  650

seq1  GACATAATAACACATTATGCAAATCAGGCTGCAAAGGAGAGCTGGAGGCT  698
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GACATAATAACACATTATGCAAATCAGGCTGC-AAGGAGAGCTGGAGGCT  699

seq1  GCCATGAAATAAACTGTCAAATGCAAGTTCTAATAAATGAACA-TTTCTT  747
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCCATGAAATAAACTGTCAAATGCAAGTTCTAATAAATGAACATTTTCTT  749

seq1  TATAGATTGTCTTAATTTGGGGAGTTGAAAAAAAATATGCTTGGCTGTGG  797
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATAGATTGTCTTAATTTGGGGAGTTGAAAAAAAATATGCTTGGCTGT-G  798

seq1  CGAATCAGGGACCTT-AGTGTGGTGTTTTGTAGAAGCTTCAGTGTTTGAC  846
      ||||||||||||||| ||||||||||||||||| |||||||||| |||||
seq2  CGAATCAGGGACCTTAAGTGTGGTGTTTTGTAG-AGCTTCAGTG-TTGAC  846

seq1  TTGACAACCA-CATTCCATCCC--TCTAATT-ATATCAAAAAGTTTC-CT  891
      ||||| |||| |||||||| ||  ||||||| ||||| ||||||||| ||
seq2  TTGACCACCACCATTCCATTCCTTTCTAATTAATATC-AAAAGTTTCTCT  895

seq1  TCAGGGAAAACT--CTCAAAACTGAG-ATTCCACCCCCCCAAAAACAATT  938
       ||||   ||||  ||| |||||||| ||||||||||||||||| |||||
seq2  CCAGG---AACTTCCTC-AAACTGAGAATTCCACCCCCCCAAAACCAATT  941

seq1  TTAAATAAATTGCATTCCT-CCATATTCATGGTT-CAGGAACATTTGAGT  986
      ||||||||||||||||||| ||||||   ||||| ||||| |||||||||
seq2  TTAAATAAATTGCATTCCTCCCATAT--CTGGTTCCAGGACCATTTGAGT  989

seq1  GTGATTTATTCTTACAT-GTTTA-CCCACTTCACAATTTGTGCTGTCCTA  1034
      |||   || || ||||| ||||| ||||| |  |||||||||||| ||||
seq2  GTGGAATAATCCTACATGGTTTACCCCACCTTCCAATTTGTGCTG-CCTA  1038

seq1  TCCGACGA  1042
      || |||||
seq2  TCGGACGA  1046


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