BAC Information

Click to search

BAC

Clone NameB6Ng01-049O15
Chromosome3 (Build37)
Map Location 148,233,322 - 148,234,340
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100040354, Lphn2, LOC100040368, LOC668893, EG381483
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049O15.b
ACCDH874028
length1,016
definitionDH874028|Mus musculus domesticus DNA, BAC clone: B6Ng01-049O15, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggcagctaagaggagggtctcaaagcatactctcacagcaac
acaccaccttcaacaaggccatccttcctaattgtgcctctccctagtcc
aaacttactcaaaccaccacacgtcttcaagttgcttttgtttaggtatt
ttatcacagcctcagaaatagaatcaagacacagtgggaaagatccattt
tagaaactaacacttattgtctgaagtgtctttgatgtaatggtttgagc
agtcctgcataagaaacgactcttcccaatctttcatggacatccacact
cgagacttgatccataagaaactaattatttcctagaacacttagatatc
tcaatcccttaatttttaatactgtggcacattaaaatttacacagctag
ctttcaggacaccattttttttttgtagaaatttgacaaattaagtggac
ttaaataaataattatatagagtgacaaagcaagttttatgttcctcaac
aaaaagtgttgtatccaaagcattctcacccatttgtacatttccctgtg
taaagtgagagaaagttacagcctaggtgtctcaacaggtagctctactt
cctgtaggcattctcacttccggtggatagagcgggctcagggttcagga
gcactgtactgttatttaatttgatatcctgatgttctcaggtcttccat
tccccaactcaatcatctcagatctcctgatgctgttttcttggagcagc
aatgtcaaagataggccttgttaaactgcctctctgaccaactccacctc
cgtcgtgtcatttcaggcttaatcacaattaaaaaaaaatcagatgatgc
aaagatagaaggaacatattatgtgagcatccagtaatggtggagctggc
gtcataggagaggaggagcttggaaagtgaagaaagagagaagtaaaaga
gtggggtgaaaccaccatagacagactgctggtggcctctcctttcatct
gggtgtgtgcctgtgc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_148233322_148234340
seq2: B6Ng01-049O15.b_48_1063 (reverse)

seq1  GCACAGGCACACACACAGATGAAAGGAGAGG-CACCAGCAGTCTGGTCTA  49
      |||||||||||||| |||||||||||||||| |||||||||||| |||||
seq2  GCACAGGCACACACCCAGATGAAAGGAGAGGCCACCAGCAGTCT-GTCTA  49

seq1  TGGTGGTTTTCACCCACTCTTTTACTTTCTCTTCTTTCTTTCACTTTCCA  99
      |||||||||   ||||||||||||| ||||| |||||| |||||||||||
seq2  TGGTGGTTTCACCCCACTCTTTTAC-TTCTC-TCTTTC-TTCACTTTCCA  96

seq1  AGCTCCTCCTCTCCTATGACGCCAGCTCCACCATTACTGGATGCTCACAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCCTCTCCTATGACGCCAGCTCCACCATTACTGGATGCTCACAT  146

seq1  AATATGTTCCTTCTATCTTTGCATCATCTGATTTTTTTTTAATTGTGATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTCCTTCTATCTTTGCATCATCTGATTTTTTTTTAATTGTGATT  196

seq1  AAGCCTGAAATGACACGACGGAGGTGGAGTTGGTCAGAGAGGCAGTTTAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGAAATGACACGACGGAGGTGGAGTTGGTCAGAGAGGCAGTTTAA  246

seq1  CAAGGCCTATCTTTGACATTGCTGCTCCAAGAAAACAGCATCAGGAGATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCTATCTTTGACATTGCTGCTCCAAGAAAACAGCATCAGGAGATC  296

seq1  TGAGATGATTGAGTTGGGGAATGGAAGACCTGAGAACATCAGGATATCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGATTGAGTTGGGGAATGGAAGACCTGAGAACATCAGGATATCAA  346

seq1  ATTAAATAACAGTACAGTGCTCCTGAACCCTGAGCCCGCTCTATCCACCG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATAACAGTACAGTGCTCCTGAACCCTGAGCCCGCTCTATCCACCG  396

seq1  GAAGTGAGAATGCCTACAGGAAGTAGAGCTACCTGTTGAGACACCTAGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGAGAATGCCTACAGGAAGTAGAGCTACCTGTTGAGACACCTAGGC  446

seq1  TGTAACTTTCTCTCACTTTACACAGGGAAATGTACAAATGGGTGAGAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTTTCTCTCACTTTACACAGGGAAATGTACAAATGGGTGAGAATG  496

seq1  CTTTGGATACAACACTTTTTGTTGAGGAACATAAAACTTGCTTTGTCACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATACAACACTTTTTGTTGAGGAACATAAAACTTGCTTTGTCACT  546

seq1  CTATATAATTATTTATTTAAGTCCACTTAATTTGTCAAATTTCTACAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAATTATTTATTTAAGTCCACTTAATTTGTCAAATTTCTACAAAA  596

seq1  AAAAAATGGTGTCCTGAAAGCTAGCTGTGTAAATTTTAATGTGCCACAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGGTGTCCTGAAAGCTAGCTGTGTAAATTTTAATGTGCCACAGT  646

seq1  ATTAAAAATTAAGGGATTGAGATATCTAAGTGTTCTAGGAAATAATTAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATTAAGGGATTGAGATATCTAAGTGTTCTAGGAAATAATTAGT  696

seq1  TTCTTATGGATCAAGTCTCGAGTGTGGATGTCCATGAAAGATTGGGAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGGATCAAGTCTCGAGTGTGGATGTCCATGAAAGATTGGGAAGA  746

seq1  GTCGTTTCTTATGCAGGACTGCTCAAACCATTACATCAAAGACACTTCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTTTCTTATGCAGGACTGCTCAAACCATTACATCAAAGACACTTCAG  796

seq1  ACAATAAGTGTTAGTTTCTAAAATGGATCTTTCCCACTGTGTCTTGATTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAGTGTTAGTTTCTAAAATGGATCTTTCCCACTGTGTCTTGATTC  846

seq1  TATTTCTGAGGCTGTGATAAAATACCTAAACAAAAGCAACTTGAAGACGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGAGGCTGTGATAAAATACCTAAACAAAAGCAACTTGAAGACGT  896

seq1  GTGGTGGTTTGAGTAAGTTTGGACTAGGGAGAGGCACAATTAGGAAGGAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGTTTGAGTAAGTTTGGACTAGGGAGAGGCACAATTAGGAAGGAT  946

seq1  GGCCTTGTTGAAGGTGGTGTGTTGCTGTGAGAGTATGCTTTGAGACCCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGTTGAAGGTGGTGTGTTGCTGTGAGAGTATGCTTTGAGACCCTC  996

seq1  CTCTTAGCTGCCTGGAATTC  1019
      ||||||||||||||||||||
seq2  CTCTTAGCTGCCTGGAATTC  1016