BAC Information

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BAC

Clone NameB6Ng01-050D17
Chromosome3 (Build37)10 (Build37)
Map Location 75,516,718 - 75,517,85445,654,046 - 45,654,125
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG667459, BC050789, Serpini2, Wdr49, Pdcd10, Serpini1
Downstream geneGolph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050D17.bB6Ng01-050D17.g
ACCDH874242DH874243
length1,107936
definitionDH874242|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D17, 5' end.DH874243|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(75,516,718 - 75,517,854)(45,654,046 - 45,654,125)
sequence
gaattcttggtaagtttattgcaaagtgcttattttttcctattttcttc
ttgagtgacaactgtcatgtattcttacattacatattttctctagtttt
tgtatgtgtatctatattttaatacgtattttgttatttaagcataaaat
atatgcacgcatgatggatcttataccctcatttaaacactgatcatttt
atcttatcttgtaattttgttacctttttaaagcttctttagacttttcc
acacatgcaatcacattttctctttatatatagtttattccactttttct
tattattctaagataagggtttttgtcttgtgtctaataattgcattggt
taatgtaattagttgaatgtagtataaaaagttggtattgaaccaattta
taacaattgttacaaattataaaaaatctagatgacagattgttctattg
agaaactaaagtagcaatgcttgtaatctctcccctttatgataaaatcc
ctggataatctcaatccgcagacagaggtgcttcatggccatatagccag
gtcccatcaaaatggacaatatacttgctcaattaagagataaataaaat
ctgaatgaatgagtgaatgaatgcctggataaaaataaattataagaaac
aatcccagttaactttattgaggaggcatggagaatggataattgtgaaa
gattagaaaatcaaaattaggtgggattgctgccattcacttaaattgac
aatttaagaaaaaaaaaaacaaatatttaagatgtggctattttcccttg
aggtttcctataagacattttagtggagacacctggtatgcatgcacctg
ttttcaaagacagagcccaaagatacatttttttttgtttgcttttcaga
tatatggtagctatatcacaagtactgagtcattctacttacacatacag
acagtagataatgtcattcttcagtacagatagacatcatgacatagagg
ctagtaatatagcaagcatgttatgtacatgtcaagactttctaattagg
gtggcacagcttcaaactcagatctactgccaaagcttgcaagtgatgcg
acagact
gaattctctgtttagatctgtatccaagttttaaattgaattatttggtt
tgttgatgtctattttcttgagctttatatattttaggaattagcccttg
ttcagatgtggtattggtaaattttgtttgtttgttttgttttgtttttt
gagacagagtttctctgtgtatccctggcttttacccattctgtggctgc
tgtcttgtccttttgacagtgtcctttgtctttcagaagccttgttggct
tcctgagttaatcaaattgttaatttgattaacaatttattaattgttga
tattagtatttgcttcatcggtgttctattcaggaaggtgtgttctgtgc
caataggttcaaggctattctgcagttttctcatccatcagaatcagtgt
atacagctttatgttgtggcctttgataaacttacatttatattttgtac
agagtgattatatagatctacttgctttcttctacatgtagtcatttagt
tagaacaacatcatttgttgaagatgctttttaaaaattgtataattctg
ccttctttatcaaaacacaggtgtccgtatgttgtgtagttacatctgcg
tcttcaattcaattctattaatcagtctgcctgtttttatggcaatacca
caaggttttgaatattatcgttctgtagtaaagcttgaaaatcagagatg
gtcatatcgtcagggtttcttttattgtacaggatcatcttacctatcct
ggggtttttgttttttctatttgaagttgagtattgttctttcaaggtct
gtaaagaattgtgtttgaattttggtggggatgcattgaatctgtagatt
gcttttggtagatgcccattttacacttactatttcatactactaatcca
tgagcatcgagatctttcatcttgatctttccatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75516718_75517854
seq2: B6Ng01-050D17.b_46_1152

seq1  GAATTCTTGGTAAGTTTATTGCAAAGTGCTTATTTTTTCCTATTTTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGTAAGTTTATTGCAAAGTGCTTATTTTTTCCTATTTTCTTC  50

seq1  TTGAGTGACAACTGTCATGTATTCTTACATTACATATTTTCTCTAGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGACAACTGTCATGTATTCTTACATTACATATTTTCTCTAGTTTT  100

seq1  TGTATGTGTATCTATATTTTAATACGTATTTTGTTATTTAAGCATAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTATCTATATTTTAATACGTATTTTGTTATTTAAGCATAAAAT  150

seq1  ATATGCACGCATGATGGATCTTATACCCTCATTTAAACACTGATCATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCACGCATGATGGATCTTATACCCTCATTTAAACACTGATCATTTT  200

seq1  ATCTTATCTTGTAATTTTGTTACCTTTTTAAAGCTTCTTTAGACTTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATCTTGTAATTTTGTTACCTTTTTAAAGCTTCTTTAGACTTTTCC  250

seq1  ACACATGCAATCACATTTTCTCTTTATATATAGTTTATTCCACTTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGCAATCACATTTTCTCTTTATATATAGTTTATTCCACTTTTTCT  300

seq1  TATTATTCTAAGATAAGGGTTTTTGTCTTGTGTCTAATAATTGCATTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCTAAGATAAGGGTTTTTGTCTTGTGTCTAATAATTGCATTGGT  350

seq1  TAATGTAATTAGTTGAATGTAGTATAAAAAGTTGGTATTGAACCAATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAATTAGTTGAATGTAGTATAAAAAGTTGGTATTGAACCAATTTA  400

seq1  TAACAATTGTTACAAATTATAAAAAATCTAGATGACAGATTGTTCTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATTGTTACAAATTATAAAAAATCTAGATGACAGATTGTTCTATTG  450

seq1  AGAAACTAAAGTAGCAATGCTTGTAATCTCTCCCCTTTATGATAAAATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTAAAGTAGCAATGCTTGTAATCTCTCCCCTTTATGATAAAATCC  500

seq1  CTGGATAATCTCAATCCGCAGACAGAGGTGCTTCATGGCCATATAGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATAATCTCAATCCGCAGACAGAGGTGCTTCATGGCCATATAGCCAG  550

seq1  GTCCCATCAAAATGGACAATATACTTGCTCAATTAAGAGATAAATAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATCAAAATGGACAATATACTTGCTCAATTAAGAGATAAATAAAAT  600

seq1  CTGAATGAATGAGTGAATGAATGCCTGGATAAAAATAAATTATAAGAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGAATGAGTGAATGAATGCCTGGATAAAAATAAATTATAAGAAAC  650

seq1  AATCCCAGTTAACTTTATTGAGGAGGCATGGAGAATGGATAATTGTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGTTAACTTTATTGAGGAGGCATGGAGAATGGATAATTGTGAAA  700

seq1  GATTAGAAAATCAAAATTAGGTGGGATTGCTGCCATTCACTTAAATTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGAAAATCAAAATTAGGTGGGATTGCTGCCATTCACTTAAATTGAC  750

seq1  AATTTAAGAAAAAAAAAAACAAATATTTAAGATGTGGCTATTTTCCCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAGAAAAAAAAAAACAAATATTTAAGATGTGGCTATTTTCCCTTG  800

seq1  AGGTTTCCTATAAGACATTTTAGTGGAGACACCTGGTATGCATGCACCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCCTATAAGACATTTTAGTGGAGACACCTGGTATGCATGCACCTG  850

seq1  TTTTCAAAGACAGAGCCCAAAGATACATTTTTTTTTGTTTTGCTTTTTCC  900
      ||||||||||||||||||||||||||||||||||||| |||||||||  |
seq2  TTTTCAAAGACAGAGCCCAAAGATACATTTTTTTTTG-TTTGCTTTT--C  897

seq1  AGATATTATGGTAGCTATATCACAAGTACTGAGTCATTCTAACTTACACA  950
      ||||| |||||||||||||||||||||||||||||||||| |||||||||
seq2  AGATA-TATGGTAGCTATATCACAAGTACTGAGTCATTCT-ACTTACACA  945

seq1  TAACAAGACAGTAGGATAATTGTCATTCTTCCAGTACAGGATAGACATCA  1000
      ||   |||||||| ||||| |||||||||| ||||||| |||||||||| 
seq2  TA--CAGACAGTA-GATAA-TGTCATTCTT-CAGTACA-GATAGACATC-  988

seq1  ATGACAATAGAGCTAAGTAATATAGCAAGGCCATGTTATGTAACATGTCA  1050
      ||||| ||||||   ||||||||||||||  |||||||||| ||||||||
seq2  ATGAC-ATAGAGGCTAGTAATATAGCAAG--CATGTTATGT-ACATGTCA  1034

seq1  AGACTTTCTACATTCTAAGTGGTGGCACCAGTCTTCAGACTCAGGATTCT  1100
      |||||||||| |||   || ||||||| ||| ||||| ||||||   |||
seq2  AGACTTTCTA-ATT---AG-GGTGGCA-CAG-CTTCAAACTCAG--ATCT  1075

seq1  ACTGCCAAAGTCTGTGCCAAGTGATGCCAGACAGACT  1137
      ||||||||||  ||   ||||||||||  ||||||||
seq2  ACTGCCAAAGCTTG---CAAGTGATGC--GACAGACT  1107

seq1: chr10_45654046_45654125
seq2: B6Ng01-050D17.g_188_260

seq1  TTTTGTTTGTTTGTTTTGTTTTGTTCTTTTTGAGACAGGGCTTCTCTGTG  50
      ||||||||||||||||||||||||  |||||||||||| | |||||||||
seq2  TTTTGTTTGTTTGTTTTGTTTTGT--TTTTTGAGACAGAGTTTCTCTGTG  48

seq1  TACCCCTGGCTGTCTTAGAGCTCATTCTGT  80
      || |||||||  | |||   | ||||||||
seq2  TATCCCTGGC--TTTTA---CCCATTCTGT  73