MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-050J11
Chromosome	3 (Build37)
Map Location	47,965,304 - 47,966,474
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC383850, LOC100039426, LOC666202
Downstream gene	LOC666208, 1700018B24Rik, LOC100039404, EG666230
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC383850 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100039426 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC666202 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 37 Proteins pseudo : _no_value

name	LOC666208 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	1700018B24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66332 MGI:1913582
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC100039404 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein

name	EG666230 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666230 MGI:3643144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039404 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251126 GeneID:100039404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein product : hypothetical protein LOC100039404 transcript_id : XM_001472797.1

name	LOC100039404 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251127 GeneID:100039404
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472847.1

name	LOC383850 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383850
definition	number : 2 pseudo : _no_value

name	LOC383850 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383850
definition	number : 1 pseudo : _no_value

name	LOC100039426 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039426
definition	number : 2 pseudo : _no_value

name	LOC100039426 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039426
definition	number : 1 pseudo : _no_value

name	LOC666208 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666208
definition	number : 1 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 18 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 17 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 16 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 15 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 14 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 13 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 12 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 11 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 10 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 9 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 8 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 7 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 6 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 5 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 4 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 3 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 2 pseudo : _no_value

name	EG666230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666230
definition	number : 1 pseudo : _no_value

name	LOC666202 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251128 GeneID:666202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 37 Proteins product : similar to tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide pseudo : _no_value transcript_id : XR_030940.1

name	1700018B24Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149251105 GeneID:66332 MGI:1913582
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700018B24 gene pseudo : _no_value transcript_id : XR_035120.1

clone name	MSMg01-539I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147M02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-524A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379D19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-339A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547O17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-472M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007C05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-050J11.b	B6Ng01-050J11.g
ACC	DH874490	DH874491
length	1,054	1,153
definition	DH874490\|Mus musculus domesticus DNA, BAC clone: B6Ng01-050J11, 5' end.	DH874491\|Mus musculus domesticus DNA, BAC clone: B6Ng01-050J11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaactgccaaataattcaactgaaatttgaatactgagctaaaca gaattctaaatagatgaaactcaaatgaccaagagacacttaaggaaatt ttcagcatccatagccattaggaaaatgcaaatcaaaactactttgtgat ttcatcttatacctgtcagaatggctaagagcaataagatatgtgacagt tcatgctggtgaggatttggaacaggcgctaatactccttaattgttgga gagagtgcaaacttttactacccctatggaaaccagtatattttttcaga atgttggctaaagatcctcttcaagatacagctagaaaatttttggacat atactcaaaggaagtttcatcctaccaaccacaggtaccttaggcaacca tggtaatagcttctctatttattgtaatcagaaattggaaactagatgtt cctcaacagaaaaatgcatacatgaaatatggtacatttaaacaatggga tattactcggccctttatttaaaacaaaaatgaggaaatttggaggcaaa tgaatggaactagaaaaatattccttgcgtaaggtaacctagatgcagat agataaatatggtatgtcttcacttagatgtagattttagatgttaagta aatgataagcaagctacaaactttaaacctggaacattaaggtataagga aggaggagactatggtggtgcagcacacaatgatttccttagaaggaaga aatagaatatattttagtggtggactgggaatagcaggggatggaggatc agttaagagtagagagagacaggagtagtggctattcctggttgtcaact tgactatatttggaatgaactacaatccagaattggaagactcaccagtg accctatcttggaggctggatatagaagtttctgacctggatcttgatat gagatcttaagcatagtggctatgaattcaaagaataagactgggagatc tcccatctaatggtatctggtattaaagttgatggaaaacactcctctgt gtga	gaattctaaagcaacatataggcaaaacacacataaacataaagtcaaaa agaatatgtatatttgtctgtccatatatacttataccttttgcttttaa attgtgagagcagtgtcgataataacagctaaaaaagaaatgtagttatt tgcatttatttatatgtttctatataaaatagtcacaaaaaaaatcgtcc ataatattaaggttgtcatgaaatcctgtagaatggcacctcttaaatta attgatttatatttgaagcaatattatatgggtatcaatgaaaaaattta actatactttggttactttcaatactttgcatctgttagaaataaagtta gatatagagaaaaacatacaaattttaagtatcattttttctagtaattg catgtaaatcatcaattgattgagttaacttcaacccagggcatgggggc aaagcaacattcctagaatccttgacaggtttaagtagaaatgtggaaga aacaactcaagcagacaacaggctgtgaccggatgtccacttgtccaggg agcaagaagttacagatttctatgctgagcatctctaattgaatcactgc tccccagggagataaaaataggaaagtgtttaccaaactggacagaatcc tgaaggattagtgtgagtcgttcatgtatgcaagttattaatgaatcaac tattgcataggcaattttaaatcgaagttttctacttgaagctatcaaat agctgagtaagaacttctccctcattgtataactgaatagatgtgccaac aacttttaaaccagtaggtgtaaggaatgtcagagcacgtcttatcagtt aacgtgatagataatcacacttaacatatacatacagaaaaccctaggtt atttttttttcagtgaagattgagaataacatctattctaataaaaatct aaccaggaacatgctgtcaactaaattgaccattaagccctaaagtttag tttctatgcagacggcaatttctaacactcaatacaattagataattgat tcacaaatttactttctcaattaagtttccatgttttttttaagaacatt ttttctttcgtggttacttatgcatgattccatcccatatcaatcaattt caa
quality values	Open. Hide. 61 41 34 38 61 38 27 53 61 61 61 61 38 24 61 61 61 61 61 61 61 43 38 61 61 61 55 49 49 52 55 52 52 30 52 52 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 45 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 53 53 61 53 50 57 57 57 57 52 57 57 47 57 53 57 57 52 47 57 57 57 47 57 57 57 57 57 38 46 45 50 57 57 53 57 47 47 53 57 57 53 57 50 57 47 57 53 57 47 57 53 45 50 53 57 53 53 53 57 57 50 52 53 45 53 40 53 30 53 53 36 57 50 53 26 37 36 38 50 50 45 52 28 52 53 47 33 50 57 53 53 53 52 57 51 28 47 41 52 40 53 45 53 50 37 53 53 53 38 42 53 39 41 34 53 50 41 17 57 57 53 53 53 53 28 41 40 53 39 57 50 43 47 28 33 34 52 41 29 50 57 43 52 32 53 50 53 52 33 50 36 46 57 50 50 52 52 36 57 47 34 52 39 43 53 37 33 36 30 38 47 22 25 12 43 26 37 32 33 34 28 52 28 43 24 47 40 21 50 47 22 36 18 40 40 37 50 53 34 53 52 42 37 28 30 17 44 31 33 36 38 32 42 36 44 32 23 57 53 33 48 37 40 33 30 52 52 23 47 36 42 29 34 57 34 36 31 24 40 40 36 29 29 29 30 57 57 40 40 31 37 43 37 37 30 25 29 17 34 37 57 40 30 33 33 29 24 33 14 13 34 39 16 33 16 30 32 37 26 37 29 14 30 6 8 6 37 25 33 23 53 21 30 9 6 27 11 44 22 46 12 32 19 28 38 31 34 19 25 25 15 30 24 25 31 29 24 26 38 27 28 30 47 21 18 21 34 28 36 28 27 30 17 15 29 24 29 28 28 29 26 17 29 18 18 29 29 17 16 28 31 25 29 10 16 29 18 11 15 20 31 20 5 29 12 10 30 26 29 29 34 13 28 13 29 28 15 29 26 12 23 18 29 30 28 30 23 28 31 17 23 10 8 35 21 17 24 20 13 11 39 13 22 10 7 16 13 14 40 29 12 29 46 24 27 28 22 28 16 39 32 30 11 7 7 16 12 38 19 5 14 13 10 46 16 5 16 14 11 23 7 9 8 18 9 21 27 29 7 15 20 12 8 18 11 11 16 6 10 19 14 19 7 11 13 6 7 14 6 7 7 5 11 7 12 14 31 14 22 8 10 10 7 24 8 29 17 7 7 5 11 14 16 6 23 20 18 8 5 9 6 9 10 7 12 9 15 15 18 8 7 6 5 7 8 10 6 10 6 10 5 11 8 9 9 6 14 8 10 6 6 17 13 13 10 13 5	Open. Hide. 61 47 52 49 61 43 28 19 18 20 20 19 21 20 19 28 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 59 61 61 59 61 61 61 59 61 59 55 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 55 61 61 55 61 61 55 61 61 55 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 50 61 61 61 61 50 61 61 61 61 61 61 61 61 61 47 61 47 61 61 50 37 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 53 52 53 61 61 61 61 61 61 61 61 61 53 45 61 61 61 61 52 61 53 61 61 39 61 61 61 61 45 52 53 50 53 57 57 47 53 53 52 53 53 57 53 45 47 47 48 53 42 52 53 45 57 57 53 53 45 39 53 57 57 53 53 30 53 38 39 53 53 53 53 45 40 33 53 53 47 42 35 53 38 53 53 57 53 33 52 57 57 53 34 47 42 34 32 38 52 42 52 46 57 46 23 25 52 28 41 39 57 47 38 23 40 25 57 41 36 50 53 35 53 57 50 50 52 53 38 37 45 38 57 50 38 45 52 45 53 50 35 19 43 15 7 45 53 27 42 39 18 52 50 29 42 42 37 40 57 50 34 38 52 22 23 31 37 45 34 43 42 52 41 33 23 21 36 35 37 40 30 33 23 44 24 36 50 32 38 57 16 40 28 30 37 39 22 53 30 24 50 10 57 57 15 9 42 35 24 30 24 37 36 31 37 57 53 52 43 31 31 42 37 20 35 29 38 30 33 37 21 30 36 35 36 38 30 37 33 40 47 27 53 12 33 33 29 30 40 30 11 9 57 36 31 23 57 29 30 32 26 29 33 53 25 35 32 26 23 29 32 40 37 34 27 22 20 36 29 34 30 28 29 30 25 21 29 12 23 32 23 46 44 30 27 45 28 27 33 29 27 27 12 6 7 8 34 20 19 18 18 17 18 18 10 31 18 28 31 14 45 8 29 19 34 28 29 28 32 29 28 24 28 26 21 10 31 25 29 29 28 28 28 20 14 17 17 33 16 34 26 21 36 19 29 13 31 29 33 19 31 18 10 23 20 19 21 43 18 29 28 20 10 20 34 51 43 22 26 30 33 22 14 28 28 29 22 29 22 51 51 51 46 41 51 41 11 19 14 24 19 7 7 6 8 25 23 14 24 41 9 11 29 14 20 33 23 10 16 29 14 17 5 25 23 17 11 29 23 12 51 51 51 29 28 31 21 29 21 20 28 20 29 16 38 14 20 12 15 31 19 31 35 19 14 7 28 19 14 23 51 19 22 16 19 20 23 33 23 35 10 24 13 24 19 36 19 21 25 51 11 18 13 51 18 28 23 29 51 23 20 9 14 15 16 19 14 19 34 20 21 30 12 27 22 33 38 8 33 6 23 24 17 6 18 15 33 23 28 15 15 10 6 21 33 29 5 5 21 6 7 28 8 7 30 11 14 30 8 10 9 5 5 4 4 7 7 17 25 20 37 20 17 10 10 6 5 28 11 12 22 18 8 5 3 4 4 3 3 3 5 30 30 33 31 34 29 27 27 25 8 10 4 6 8 15 21 35 15 30 10 8 6 24 12 7 7 5 23 13 4 3 3 3 5 4 21 4 17 12 11 9 4 2 1 6 7 6 3 4 3 27 12 5 10 4 4 4 7 5 13 11 6 12 11 25 19 12 20 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_47965304_47966474
seq2: B6Ng01-050J11.g_67_1219 (reverse)

seq1  TTGAAATTGATTGAGTATGGGAATGTGGAACTCATGCATTAAGATAAAAC  50
      |||||||||||||| |||||||   ||||| ||||||| ||||   || |
seq2  TTGAAATTGATTGA-TATGGGA---TGGAA-TCATGCA-TAAG--TAACC  42

seq1  ACAGAAAGAAAAAAAATGCTCTTTAAAAAAAAACATAGATACTTAAATGA  100
      || |||||  |||||||| ||||  ||||||||||| || |||||| |||
seq2  AC-GAAAG--AAAAAATGTTCTT--AAAAAAAACATGGAAACTTAATTGA  87

seq1  GAAAGTAAAATATGTGAAATCCAATTATCTAAATTGTATTGAGTGTTAGG  150
      |||||| |||| ||||||   ||||||||| ||||||||||||||||| |
seq2  GAAAGT-AAATTTGTGAA--TCAATTATCT-AATTGTATTGAGTGTTA-G  132

seq1  AAATTGCCGTCTGCATAGAAACTAAACTTTAGGGCTTTAATGGTCAATTT  200
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAATTGCCGTCTGCATAGAAACTAAACTTTAGGGC-TTAATGGTCAATTT  181

seq1  AGTTGACAGCATGTTCCTGGTTAGATTTTTATTAGAATAGATGTTATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGTTGACAGCATGTTCCTGGTTAGATTTTTATTAGAATAGATGTTATTC-  230

seq1  TCAATC-TCACTG-AAAAAAAATAACCTAGGGTTTTCTGTATGTATATGT  298
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  TCAATCTTCACTGAAAAAAAAATAACCTAGGGTTTTCTGTATGTATATGT  280

seq1  TAAGTGTGATTATCTATCACGTTAACTGATAAGACGTGCTCTGACATTCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTGATTATCTATCACGTTAACTGATAAGACGTGCTCTGACATTCC  330

seq1  TTACACCTACTGGTTTAAAAGTTGTTGGCACATCTATTCAGTTATACAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCTACTGGTTTAAAAGTTGTTGGCACATCTATTCAGTTATACAAT  380

seq1  GAGGGAGAAGTTCTTACTCAGCTATTTGATAGCTTCAAGTAGAAAACTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAAGTTCTTACTCAGCTATTTGATAGCTTCAAGTAGAAAACTTC  430

seq1  GATTTAAAATTGCCTATGCAATAGTTGATTCATTAATAACTTGCATACAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAAATTGCCTATGCAATAGTTGATTCATTAATAACTTGCATACAT  480

seq1  GAACGACTCACACTAATCCTTCAGGATTCTGTCCAGTTTGGTAAACACTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGACTCACACTAATCCTTCAGGATTCTGTCCAGTTTGGTAAACACTT  530

seq1  TCCTATTTTTATCTCCCTGGGGAGCAGTGATTCAATTAGAGATGCTCAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTTTTATCTCCCTGGGGAGCAGTGATTCAATTAGAGATGCTCAGC  580

seq1  ATAGAAATCTGTAACTTCTTGCTCCCTGGACAAGTGGACATCCGGTCACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATCTGTAACTTCTTGCTCCCTGGACAAGTGGACATCCGGTCACA  630

seq1  GCCTGTTGTCTGCTTGAGTTGTTTCTTCCACATTTCTACTTAAACCTGTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTGTCTGCTTGAGTTGTTTCTTCCACATTTCTACTTAAACCTGTC  680

seq1  AAGGATTCTAGGAATGTTGCTTTGCCCCCATGCCCTGGGTTGAAGTTAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTCTAGGAATGTTGCTTTGCCCCCATGCCCTGGGTTGAAGTTAAC  730

seq1  TCAATCAATTGATGATTTACATGCAATTACTAGAAAAAATGATACTTAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAATTGATGATTTACATGCAATTACTAGAAAAAATGATACTTAAA  780

seq1  ATTTGTATGTTTTTCTCTATATCTAACTTTATTTCTAACAGATGCAAAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATGTTTTTCTCTATATCTAACTTTATTTCTAACAGATGCAAAGT  830

seq1  ATTGAAAGTAACCAAAGTATAGTTAAATTTTTTCATTGATACCCATATAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGTAACCAAAGTATAGTTAAATTTTTTCATTGATACCCATATAA  880

seq1  TATTGCTTCAAATATAAATCAATTAATTTAAGAGGTGCCATTCTACAGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTTCAAATATAAATCAATTAATTTAAGAGGTGCCATTCTACAGGA  930

seq1  TTTCATGACAACCTTAATATTATGGACGATTTTTTTTGTGACTATTTTAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGACAACCTTAATATTATGGACGATTTTTTTTGTGACTATTTTAT  980

seq1  ATAGAAACATATAAATAAATGCAAATAACTACATTTCTTTTTTAGCTGTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACATATAAATAAATGCAAATAACTACATTTCTTTTTTAGCTGTT  1030

seq1  ATTATCGACACTGCTCTCACAATTTAAAAGCAAAAGGTATAAGTATATAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCGACACTGCTCTCACAATTTAAAAGCAAAAGGTATAAGTATATAT  1080

seq1  GGACAGACAAATATACATATTCTTTTTGACTTTATGTTTATGTGTGTTTT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGACAAATATACATATTCTTTTTGACTTTATGTTTATGTGTGTTTT  1130

seq1  GCCTATATGTTGCTTTAGAATTC  1171
      |||||||||||||||||||||||
seq2  GCCTATATGTTGCTTTAGAATTC  1153

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information