BAC Information

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BAC

Clone NameB6Ng01-051E19
Chromosome3 (Build37)
Map Location 81,034,314 - 81,201,525
singlet/doubletdoublet
Overlap genenone
Upstream geneEG626797, Gria2, Glrb, EG626841, Pdgfc
Downstream geneLOC229443, LOC100041901, Ctso, Tdo2, Accn5, Gucy1b3, Gucy1a3, Mtap9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051E19.bB6Ng01-051E19.g
ACCDH874984DH874985
length952452
definitionDH874984|Mus musculus domesticus DNA, BAC clone: B6Ng01-051E19, 5' end.DH874985|Mus musculus domesticus DNA, BAC clone: B6Ng01-051E19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,034,314 - 81,034,941)(81,201,068 - 81,201,525)
sequence
gaattcatacagaaaatggctctatgcacttaagatctacttgtaactct
tttgcattgttagccacccctccatccttgaactcatttcctatcaccag
tgatctgctttctatctctgtgctatgacattttctttaaaaaaaattat
tgattctttttgagattcatatcatgtatccagtctcactcactccccac
ctcctcacattgaccctttgcccttgcagccttttctcccctcaaataaa
acgtatacaaacaacagccacagcagcaatgaaaaccagcacagaataac
aaaacaaatcaaaattaaaaatacaaagtgtagaaacatcttatctcatc
ataatcacagtgtatccaacagtttatccctctgtccacaatcttccctt
gcaaatgttcattgcaatgagtcactggggtagttcaagatcccgggctt
ctgtgacacaaacaatattggatcctctttttttcaaagatattttcttt
atatacatttcaaatgctatcctgaaagttccctataccttctccccgcc
ctgctcccctacctacccactcctgcttcttggccctggcattcccctgt
actggagcatataaagcttgcaataccaaggggcctctcttcccagtgat
ggcccactaggcaatcttctgctacctatgcagctagagacacgagctct
gggggtaccggttagttcatattgttgttccacctatagagttgcagacc
ccttcagctccttgggtgctttctctagcttctcctttgggggccctgag
ttccatcttatagatgactgtgagcatccacttctgtatttgctaagcgc
tggcatagcctcatatgagacagctataacaggtcccttcacaaatcttt
ctggcatatgcaatagtgtctgggtttggtggctgatatgggatggatcc
cc
ttcacagacagctttgaatttcaaaagatccaccaagagcatgagttttg
agaatttgaaactaaatagctcatgacaaattccaaaacaatcaagttgt
tctccaaagaaaatcatgggcaggtgagctgtactgagcactttcaagtg
tgactaagctcattaaagcttatggagaaatcctggcctgtgtatagaga
gggtttgctgattcagcacagagtggcaggcaagagggtgatacaaatgt
aggcaaatagagttcactactgaggcttgttcgaggtccatgagtgtcaa
agagagtctacttttattccagttcataacttactatgatttcaaatctt
gcatatattttgtagttaagattatctagaatgttcaagccaaaagaagg
ctaggcaaaggtgagagaggagagcagatgtgggaagggaggttggtgga
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_81034314_81034941
seq2: B6Ng01-051E19.b_41_668

seq1  GAATTCATACAGAAAATGGCTCTATGCACTTAAGATCTACTTGTAACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACAGAAAATGGCTCTATGCACTTAAGATCTACTTGTAACTCT  50

seq1  TTTGCATTGTTAGCCACCCCTCCATCCTTGAACTCATTTCCTATCACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTGTTAGCCACCCCTCCATCCTTGAACTCATTTCCTATCACCAG  100

seq1  TGATCTGCTTTCTATCTCTGTGCTATGACATTTTCTTTAAAAAAAATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGCTTTCTATCTCTGTGCTATGACATTTTCTTTAAAAAAAATTAT  150

seq1  TGATTCTTTTTGAGATTCATATCATGTATCCAGTCTCACTCACTCCCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTTTTTGAGATTCATATCATGTATCCAGTCTCACTCACTCCCCAC  200

seq1  CTCCTCACATTGACCCTTTGCCCTTGCAGCCTTTTCTCCCCTCAAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCACATTGACCCTTTGCCCTTGCAGCCTTTTCTCCCCTCAAATAAA  250

seq1  ACGTATACAAACAACAGCCACAGCAGCAATGAAAACCAGCACAGAATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATACAAACAACAGCCACAGCAGCAATGAAAACCAGCACAGAATAAC  300

seq1  AAAACAAATCAAAATTAAAAATACAAAGTGTAGAAACATCTTATCTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAATCAAAATTAAAAATACAAAGTGTAGAAACATCTTATCTCATC  350

seq1  ATAATCACAGTGTATCCAACAGTTTATCCCTCTGTCCACAATCTTCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCACAGTGTATCCAACAGTTTATCCCTCTGTCCACAATCTTCCCTT  400

seq1  GCAAATGTTCATTGCAATGAGTCACTGGGGTAGTTCAAGATCCCGGGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTTCATTGCAATGAGTCACTGGGGTAGTTCAAGATCCCGGGCTT  450

seq1  CTGTGACACAAACAATATTGGATCCTCTTTTTTTCAAAGATATTTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACACAAACAATATTGGATCCTCTTTTTTTCAAAGATATTTTCTTT  500

seq1  ATATACATTTCAAATGCTATCCTGAAAGTTCCCTATACCTTCTCCCCGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATTTCAAATGCTATCCTGAAAGTTCCCTATACCTTCTCCCCGCC  550

seq1  CTGCTCCCCTACCTACCCACTCCTGCTTCTTGGCCCTGGCATTCCCCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCCCTACCTACCCACTCCTGCTTCTTGGCCCTGGCATTCCCCTGT  600

seq1  ACTGGAGCATATAAAGCTTGCAATACCA  628
      ||||||||||||||||||||||||||||
seq2  ACTGGAGCATATAAAGCTTGCAATACCA  628

seq1: chr3_81201068_81201525
seq2: B6Ng01-051E19.g_66_523 (reverse)

seq1  CCTCCACCAACCTCCCTTCCCACATCTGCTCTCCTCTCTCACCTTTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACCAACCTCCCTTCCCACATCTGCTCTCCTCTCTCACCTTTGCCT  50

seq1  AGCCTTCTTTTGGCTTGAACATTCTAGATAATCTTAACTACAAAATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCTTTTGGCTTGAACATTCTAGATAATCTTAACTACAAAATATAT  100

seq1  GCAAGATTTGAAATCATAGTAAGTTATGAACTGGAATAAAAGTAGACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATTTGAAATCATAGTAAGTTATGAACTGGAATAAAAGTAGACTCT  150

seq1  CTTTGACACTCATGGACCTCGAACAAGCCTCAGTAGTGAACTCTATTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACACTCATGGACCTCGAACAAGCCTCAGTAGTGAACTCTATTTGC  200

seq1  CTACATTTGTATCACCCTCTTGCCTGCCACTCTGTGCTGAATCAGCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTGTATCACCCTCTTGCCTGCCACTCTGTGCTGAATCAGCAAAC  250

seq1  CCTCTCTATACACAGGCCAGGATTTCTCCATAAGCTTTAATGAGCTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTATACACAGGCCAGGATTTCTCCATAAGCTTTAATGAGCTTAGT  300

seq1  CACACTTGAAAGTGCTCAGTACAGCTCACCTGCCCATGATTTTCTTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTGAAAGTGCTCAGTACAGCTCACCTGCCCATGATTTTCTTTGGA  350

seq1  GAACAACTTGATTGTTTTGGAATTTGTCATGAGCTATTTAGTTTCAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACTTGATTGTTTTGGAATTTGTCATGAGCTATTTAGTTTCAAATT  400

seq1  CTCAAAACTCATGCTCTTGGTGGATCTTTTGAAATTCAAAGCTGTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAACTCATGCTCTTGGTGGATCTTTTGAAATTCAAAGCTGTCTGTG  450

seq1  AAGAATTC  458
      ||||||||
seq2  AAGAATTC  458