BAC Information

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BAC

Clone NameB6Ng01-051F19
Chromosome3 (Build37)
Map Location 97,442,150 - 97,442,844
singlet/doubletsinglet
Overlap geneFmo5
Upstream genePex11b, Itga10, Ankrd35, Pias3, Polr3c, Zfp364, Cd160, Pdzk1, Gpr89, Gja8, 9230114J08Rik, Gja5, Acp6, Bcl9, Olfr1402, Chd1l
Downstream genePrkab2, Pde4dip, Sec22b, EG433632, LOC100042975, Notch2, Adam30, LOC622561, Reg4, Hmgcs2, Phgdh, Zfp697, LOC100043461, Hsd3b4, LOC100043456, EG545555, LOC676433, Hsd3b5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051F19.g
ACCDH875030
length696
definitionDH875030|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccactgggttcttatagtctcggctgtgaaagtactttcctttga
acttttcaattcctagaagagaagaaaaaattaattattgggagaggggg
gagaggcctgtttgaatgaaggatattatttgtcaaagcacgtgttgtgt
tctcttttgtgaattttaaagtttaaacgtgtatttccaaattctccttt
attaagcaactcttcttgcctttctgaacaattttgcttctttcttctct
cgttgcctttgtgatttccctgctataaatcatctgcattttgatttgca
gatgcaagtcctgaggccgcagaaaccctcccttctccttcatctgttca
ccccccacccttgtacgtgcacattgggcatatgtagaatgtatttttaa
agggaaaagttcaggccagaaacatgaaatgaaatgctttaagcttttgc
ttcattcttagaaattcaatatttccatagttttcttcaattgaagaaaa
aaaatctctaattccaattagtacaaatcagagactccagcttctctttg
gttcttgggaaaacacaatcaccatgaatttaagtacagtcctgtgctat
tggacaggggttctgtcattctgagaagcaggttaaagatggatttcatc
attggacagatacatacatgcctcgaatggcacaggtcagtcaaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_97442150_97442844
seq2: B6Ng01-051F19.g_67_762 (reverse)

seq1  TTTTGACTGACCTGTGCCA-TCGAGGCATGTATGTATCTGTCCAATGATG  49
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTTGACTGACCTGTGCCATTCGAGGCATGTATGTATCTGTCCAATGATG  50

seq1  AAATCCATCTTTAACCTGCTTCTCAGAATGACAGAACCCCTGTCCAATAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCATCTTTAACCTGCTTCTCAGAATGACAGAACCCCTGTCCAATAG  100

seq1  CACAGGACTGTACTTAAATTCATGGTGATTGTGTTTTCCCAAGAACCAAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGACTGTACTTAAATTCATGGTGATTGTGTTTTCCCAAGAACCAAA  150

seq1  GAGAAGCTGGAGTCTCTGATTTGTACTAATTGGAATTAGAGATTTTTTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCTGGAGTCTCTGATTTGTACTAATTGGAATTAGAGATTTTTTTT  200

seq1  CTTCAATTGAAGAAAACTATGGAAATATTGAATTTCTAAGAATGAAGCAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATTGAAGAAAACTATGGAAATATTGAATTTCTAAGAATGAAGCAA  250

seq1  AAGCTTAAAGCATTTCATTTCATGTTTCTGGCCTGAACTTTTCCCTTTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTAAAGCATTTCATTTCATGTTTCTGGCCTGAACTTTTCCCTTTAA  300

seq1  AAATACATTCTACATATGCCCAATGTGCACGTACAAGGGTGGGGGGTGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATTCTACATATGCCCAATGTGCACGTACAAGGGTGGGGGGTGAA  350

seq1  CAGATGAAGGAGAAGGGAGGGTTTCTGCGGCCTCAGGACTTGCATCTGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAAGGAGAAGGGAGGGTTTCTGCGGCCTCAGGACTTGCATCTGCA  400

seq1  AATCAAAATGCAGATGATTTATAGCAGGGAAATCACAAAGGCAACGAGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAATGCAGATGATTTATAGCAGGGAAATCACAAAGGCAACGAGAG  450

seq1  AAGAAAGAAGCAAAATTGTTCAGAAAGGCAAGAAGAGTTGCTTAATAAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAGCAAAATTGTTCAGAAAGGCAAGAAGAGTTGCTTAATAAAG  500

seq1  GAGAATTTGGAAATACACGTTTAAACTTTAAAATTCACAAAAGAGAACAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTTGGAAATACACGTTTAAACTTTAAAATTCACAAAAGAGAACAC  550

seq1  AACACGTGCTTTGACAAATAATATCCTTCATTCAAACAGGCCTCTCCCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGTGCTTTGACAAATAATATCCTTCATTCAAACAGGCCTCTCCCCC  600

seq1  CTCTCCCAATAATTAATTTTTTCTTCTCTTCTAGGAATTGAAAAGTTCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCAATAATTAATTTTTTCTTCTCTTCTAGGAATTGAAAAGTTCAA  650

seq1  AGGAAAGTACTTTCACAGCCGAGACTATAAGAACCCAGTGGAATTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGTACTTTCACAGCCGAGACTATAAGAACCCAGTGGAATTC  696