BAC Information

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BAC

Clone NameB6Ng01-051F22
Chromosome3 (Build37)1 (Build37)
Map Location 79,442,412 - 79,442,939141,196,969 - 141,198,106
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik
Downstream geneRxfp1, Tmem144, 1110032E23Rik, EG626797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051F22.bB6Ng01-051F22.g
ACCDH875035DH875036
length1,0441,140
definitionDH875035|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F22, 5' end.DH875036|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(79,442,412 - 79,442,939)(141,196,969 - 141,198,106)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
tctgagatcttctttaatttctttcttcagggacttgaagtttttatcat
acagatctttcacttccttcgttagagtcacgccgagatattttatatta
tttgtggctattgagaaggtgtttgtttccctaatttctttctcagcctg
tttattctttggtgtagagaaaggccatggacttggtttgagta
gaattcactgcattctagtttccttaactttgaatttttgccaatcattt
atcctgtcctctgtctttcagccagaaaagacaaatgtcagtgagaaagc
acttacagggcctggggaatatataacctaagggtagatcacttgcctac
cataagtgaggcactgcaaaaattaaaacacaccaacaaaagataaagga
gagatccattatgattcctgctttagcaacttgagccacttggtaaaagt
acattcaaccaaacgttcattatttttatgatgtggaatcatgctgactc
aagagtaacttccaagttgttaggtttgtgtctcttaatctctatacatt
gtggcattgctacatcaaattactgtcagtttatccttcagggcaaaaag
gccttcaggctcctgactggtcaaaacagaataatatgcttttaagataa
atatgtataaccccttgctcttctttttttggcatttttattaaaaaaaa
tcatgtaactacagttgtatggacttatatctgggttctcaattttactc
taccaacctgtgtggttttgtgctgataccacacaagtatattggtagta
ttctataagatagtttagagtgagatatactgctagctcccacagaattc
ctttcatgcactgtgctttgtgtctccttaacacttctttttcttttctt
tttttttataattttgattttatatgttctttttttaaatttattacgta
ttttcctcaattacatttccaatgctatcccaaaagtcccccataccccc
ccccttccctacctacccattcccatttttttggccctggcattcccctg
tactggagcatataaagtttgcaagtccaatgggcctctctttccagtga
tggccgactaggccatcttttgatacatatgtagctagagttagagctcc
ggggtactggttagttcattatgttgttccatctatagggttgcaggtcc
ctttagcccttggggtactttcctctagctcctccaatggggggacctgg
ttccatcctatagctgactgtgagcatctacctctgtgttttgctaggcc
ccggcatattccttcagagagagtcattaatctgggtcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_79442412_79442939
seq2: B6Ng01-051F22.b_557_1087 (reverse)

seq1  ACTCAAA-CAAGTCAATGGCCTTTCTCTACA-CAAAGAATAAACAGGCTG  48
      ||||||| |||||| |||||||||||||||| ||||||||||||||||||
seq2  ACTCAAACCAAGTCCATGGCCTTTCTCTACACCAAAGAATAAACAGGCTG  50

seq1  AGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGCCACAAATAATATA  98
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  AGAAAGAAATTAGGGAAACAAACACCTTCTCAATAGCCACAAATAATATA  100

seq1  AAATATCTCGGCGTGACTCTAACGAAGGAAGTGAAAGATCTGTATGATAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTCGGCGTGACTCTAACGAAGGAAGTGAAAGATCTGTATGATAA  150

seq1  AAACTTCAAGTCCCTGAAGAAAGAAATTAAAGAAGATCTCAG-AAGATGG  197
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAACTTCAAGTCCCTGAAGAAAGAAATTAAAGAAGATCTCAGAAAGATGG  200

seq1  AAAGATCTCCCATGCTCATGGATTGGCAGGACCAACATTGTAAAAATGGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTCCCATGCTCATGGATTGGCAGGACCAACATTGTAAAAATGGC  250

seq1  TATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATTAAAATTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATTAAAATTC  300

seq1  CAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGG  350

seq1  AATAACAAAAAACCGAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAAAAAACCGAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAAC  400

seq1  CTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTG  450

seq1  TGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTGGACCAATGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTGGACCAATGG  500

seq1  AATAGAATTGAAGACCCAGAAATGAACCCAC  528
      |||||||||||||||||||||||||||||||
seq2  AATAGAATTGAAGACCCAGAAATGAACCCAC  531

seq1: chr1_141196969_141198106
seq2: B6Ng01-051F22.g_66_1205 (reverse)

seq1  AGGACCCAGAT--ATAGCTCTCTCTTGAGAGACTATGCCGGGGCCTAGC-  47
      |||||||||||  ||  ||||||| |||  || |||||||||||||||| 
seq2  AGGACCCAGATTAATGACTCTCTC-TGAAGGAATATGCCGGGGCCTAGCA  49

seq1  AAACACAGAAGTGGATGCTCACAGTCAGCTATAGGATGGAACACAGG-GC  96
      ||||||||| || ||||||||||||||||||||||||||||| ||||  |
seq2  AAACACAGAGGTAGATGCTCACAGTCAGCTATAGGATGGAAC-CAGGTCC  98

seq1  CCCCAATGGAGGAGCTAGA-GAAAGTACCCAAGGAGCTAAAGGGACCTGC  145
      ||||| ||||||||||||| |||||||||| | | |||||||||||||||
seq2  CCCCATTGGAGGAGCTAGAGGAAAGTACCCCAAGGGCTAAAGGGACCTGC  148

seq1  AACCCTATAGATGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCT  195
      |||||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  AACCCTATAGATGGAACAACATAATGAACTAACCAGTACCCCGGAGCTC-  197

seq1  TGACTCTAGCTACATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGG  245
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTAGCTACATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGG  247

seq1  AAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCTCCAGTACAGGGGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCTCCAGTACAGGGGA  297

seq1  ATGCCAGGGCCAAAAAAATGGGAATGGGTAGGTAGGGAAGGGGGGGGGTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGGGCCAAAAAAATGGGAATGGGTAGGTAGGGAAGGGGGGGGGTA  347

seq1  TGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAAATACGTAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAAATACGTAA  397

seq1  TAAATTTAAAAAAAGAACATATAAAATCAAAATTATAAAAAAAAAGAAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTAAAAAAAGAACATATAAAATCAAAATTATAAAAAAAAAGAAAA  447

seq1  GAAAAAGAAGTGTTAAGGAGACACAAAGCACAGTGCATGAAAGGAATTCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAAGTGTTAAGGAGACACAAAGCACAGTGCATGAAAGGAATTCT  497

seq1  GTGGGAGCTAGCAGTATATCTCACTCTAAACTATCTTATAGAATACTACC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGCTAGCAGTATATCTCACTCTAAACTATCTTATAGAATACTACC  547

seq1  AATATACTTGTGTGGTATCAGCACAAAACCACACAGGTTGGTAGAGTAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTTGTGTGGTATCAGCACAAAACCACACAGGTTGGTAGAGTAAA  597

seq1  ATTGAGAACCCAGATATAAGTCCATACAACTGTAGTTACATGATTTTTTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAACCCAGATATAAGTCCATACAACTGTAGTTACATGATTTTTTT  647

seq1  TAATAAAAATGCCAAAAAAAGAAGAGCAAGGGGTTATACATATTTATCTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAATGCCAAAAAAAGAAGAGCAAGGGGTTATACATATTTATCTT  697

seq1  AAAAGCATATTATTCTGTTTTGACCAGTCAGGAGCCTGAAGGCCTTTTTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATATTATTCTGTTTTGACCAGTCAGGAGCCTGAAGGCCTTTTTG  747

seq1  CCCTGAAGGATAAACTGACAGTAATTTGATGTAGCAATGCCACAATGTAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAGGATAAACTGACAGTAATTTGATGTAGCAATGCCACAATGTAT  797

seq1  AGAGATTAAGAGACACAAACCTAACAACTTGGAAGTTACTCTTGAGTCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTAAGAGACACAAACCTAACAACTTGGAAGTTACTCTTGAGTCAG  847

seq1  CATGATTCCACATCATAAAAATAATGAACGTTTGGTTGAATGTACTTTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTCCACATCATAAAAATAATGAACGTTTGGTTGAATGTACTTTTA  897

seq1  CCAAGTGGCTCAAGTTGCTAAAGCAGGAATCATAATGGATCTCTCCTTTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGGCTCAAGTTGCTAAAGCAGGAATCATAATGGATCTCTCCTTTA  947

seq1  TCTTTTGTTGGTGTGTTTTAATTTTTGCAGTGCCTCACTTATGGTAGGCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTTGGTGTGTTTTAATTTTTGCAGTGCCTCACTTATGGTAGGCA  997

seq1  AGTGATCTACCCTTAGGTTATATATTCCCCAGGCCCTGTAAGTGCTTTCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCTACCCTTAGGTTATATATTCCCCAGGCCCTGTAAGTGCTTTCT  1047

seq1  CACTGACATTTGTCTTTTCTGGCTGAAAGACAGAGGACAGGATAAATGAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACATTTGTCTTTTCTGGCTGAAAGACAGAGGACAGGATAAATGAT  1097

seq1  TGGCAAAAATTCAAAGTTAAGGAAACTAGAATGCAGTGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAAATTCAAAGTTAAGGAAACTAGAATGCAGTGAATTC  1140