BAC Information

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BAC

Clone NameB6Ng01-051G04
Chromosome3 (Build37)
Map Location 9,010,692 - 9,104,630
singlet/doubletdoublet
Overlap geneLOC100041389, LOC667886
Upstream geneLOC633072, LOC545500, LOC620966, Stmn2, Hey1, LOC100039504, Mrps28, Tpd52
Downstream geneZbtb10, Zfp704, Pag1, LOC621504, Fabp5, LOC100041480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051G04.bB6Ng01-051G04.g
ACCDH875043DH875044
length1,099920
definitionDH875043|Mus musculus domesticus DNA, BAC clone: B6Ng01-051G04, 5' end.DH875044|Mus musculus domesticus DNA, BAC clone: B6Ng01-051G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,103,519 - 9,104,630)(9,010,692 - 9,011,536)
sequence
gaattccaggacagctagggctatgaagagagacccccatctataataat
aataataataataataatgtgaaattcagacatgcgcattaaagcctctc
tttataactcttttctttatgtgggacttgatttcaggctcaggacctca
cacacagaaggcaagtgccccaccattgtgctacatgcccagttccaggc
ctcaactttaaacacactaaggtttcttgcagcctctaggggtgtgggct
gccaggcgttcttattccaccagtggccatgacatgtgtccaggcaaggg
gtcagcagctgcagtgtgaccagctcctccctcatccatgctctgggctc
agtcctctacctgaactaacttggctctcgcaatagtcccattacgcagt
tggggaaatgaggagcaagaatgtttaagtcacttgccagaggacaatga
cttaataagagggaagggctcctggctccaggtgtgcattgctgacctcc
actgtaacctggggagattggacagacgggtttcttgagatctggataga
aatgaagagaagaaccgtgttgtgatgcttttaatcccagctctcgggaa
gcaggggctgaaggatcaagaattcagggctagcctgggctacatggcaa
tcccagcctgagctgcatgagctctctctcaccctctccccaatcccagc
ctaaaaatatgaaattaaatcaaactttgaaccttccaactccacagcct
gagctgcgggctccctcctgcactttcttccccaggcctctccgagtcct
gccgctcctggtttgtgtgccggtccagtgcctagatctaggtgcctcca
ccaacacagtgttttgttttgagctaaggtattattttcttactccaacc
aacgggcccagagctcatgaggtcccctggcaggactaaaagttgtaggg
atcctccctctgtagccttccaaatgcctggtgacacagtcatgctaata
gcccactgggtcagactgctcttgaaccctttggtccctaccacacccag
tgatggtggcgtatcatacttgtagccaggtgtgtaacgtctccgagat
gaattccacgcccctaagccccttaccccataaaaacccctagctttcaa
gcctcgtggccgacattcattatctcctgtgtgggatgcatgtcagtccg
gagctccgtaattaaacgtcctcatgtaattacatcaagagatggtcctt
cgtgattttttgggtgcacaccaaatcgggaattgggtgggggtttccca
actagatctaacacttatgagttcaaggtcaccctcagctatacagagtt
caaaaccagcgtggtgcacatgagacccaaaataaagcagtgaggaagaa
taagacatacacatctgtaatcccaactcttaagaaactgaggccaagca
ggccttgggcacaaactccgaagccagacccacaacacccagagacagct
ccactcccagatgctctaacacgcccaggatcagaggatcacaggatccc
aggagcttggtcacaccaggatccccagtctcaaaggtagcttgactccc
aggaattctgacacacccagaatctcaggatcccagagacagctggactc
tgaggagttctgactcaatcaggattacaagaaggacaggctcccatcag
atatagtgaggacaaggagctctagagataaccagatgtcggcaggcaag
cataagaacagaagcaacagaaaccaaggttacttggcatcatcagaacc
aaattctcccaccataccaagtcctggatacccaacacaccagaaaagca
agattcagatctaaaaatcacctctcgtgatgattatagaggacattaag
aaggacataaataactcgggaggcagaggcaggcagatttctgagttcaa
ggccagcctggtctacaaagtgagttccaggacagccaggctacacagag
aaaccctgtctcggaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_9103519_9104630
seq2: B6Ng01-051G04.b_43_1141 (reverse)

seq1  ATCTCTGGAGACGTTAAACAAACACCCTTGGCTAC-AGTATTGATACGCC  49
      ||||| |||||||||      |||| | ||||||| |||| |||||||||
seq2  ATCTC-GGAGACGTT------ACACACCTGGCTACAAGTA-TGATACGCC  42

seq1  ACCATCACTGGGTGTGGTAGGGGACCAAAAAGGGTTCAAAGAGCAGGTCT  99
      ||||||||||||||||||| ||||||  ||||||||| ||||||| ||||
seq2  ACCATCACTGGGTGTGGTA-GGGACC--AAAGGGTTC-AAGAGCA-GTCT  87

seq1  GACCCAGTGGGCCTATTAGCATGACTGTGTCACCAGGCATTTGGAAGGCT  149
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGTGGG-CTATTAGCATGACTGTGTCACCAGGCATTTGGAAGGCT  136

seq1  ACAGAGGGAGGATCCCTACAACTTTTAGTCCTGCCAGGGGACCTCATGAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGGAGGATCCCTACAACTTTTAGTCCTGCCAGGGGACCTCATGAG  186

seq1  CTCTGGGCCCGTTGGTTGGAGTAAGAAAATAATACCTTAGCTCAAAACAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGCCCGTTGGTTGGAGTAAGAAAATAATACCTTAGCTCAAAACAA  236

seq1  AACACTGTGTTGGTGGAGGCACCTAGATCTAGGCACTGGACCGGCACACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGTGTTGGTGGAGGCACCTAGATCTAGGCACTGGACCGGCACACA  286

seq1  AACCAGGAGCGGCAGGACTCGGAGAGGCCTGGGGAAGAAAGTGCAGGAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGAGCGGCAGGACTCGGAGAGGCCTGGGGAAGAAAGTGCAGGAGG  336

seq1  GAGCCCGCAGCTCAGGCTGTGGAGTTGGAAGGTTCAAAGTTTGATTTAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCGCAGCTCAGGCTGTGGAGTTGGAAGGTTCAAAGTTTGATTTAAT  386

seq1  TTCATATTTTTAGGCTGGGATTGGGGAGAGGGTGAGAGAGAGCTCATGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTTTAGGCTGGGATTGGGGAGAGGGTGAGAGAGAGCTCATGCA  436

seq1  GCTCAGGCTGGGATTGCCATGTAGCCCAGGCTAGCCCTGAATTCTTGATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGCTGGGATTGCCATGTAGCCCAGGCTAGCCCTGAATTCTTGATC  486

seq1  CTTCAGCCCCTGCTTCCCGAGAGCTGGGATTAAAAGCATCACAACACGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCCCCTGCTTCCCGAGAGCTGGGATTAAAAGCATCACAACACGGT  536

seq1  TCTTCTCTTCATTTCTATCCAGATCTCAAGAAACCCGTCTGTCCAATCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTCATTTCTATCCAGATCTCAAGAAACCCGTCTGTCCAATCTC  586

seq1  CCCAGGTTACAGTGGAGGTCAGCAATGCACACCTGGAGCCAGGAGCCCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTTACAGTGGAGGTCAGCAATGCACACCTGGAGCCAGGAGCCCTT  636

seq1  CCCTCTTATTAAGTCATTGTCCTCTGGCAAGTGACTTAAACATTCTTGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTATTAAGTCATTGTCCTCTGGCAAGTGACTTAAACATTCTTGCT  686

seq1  CCTCATTTCCCCAACTGCGTAATGGGACTATTGCGAGAGCCAAGTTAGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTTCCCCAACTGCGTAATGGGACTATTGCGAGAGCCAAGTTAGTT  736

seq1  CAGGTAGAGGACTGAGCCCAGAGCATGGATGAGGGAGGAGCTGGTCACAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGAGGACTGAGCCCAGAGCATGGATGAGGGAGGAGCTGGTCACAC  786

seq1  TGCAGCTGCTGACCCCTTGCCTGGACACATGTCATGGCCACTGGTGGAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTGCTGACCCCTTGCCTGGACACATGTCATGGCCACTGGTGGAAT  836

seq1  AAGAACGCCTGGCAGCCCACACCCCTAGAGGCTGCAAGAAACCTTAGTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACGCCTGGCAGCCCACACCCCTAGAGGCTGCAAGAAACCTTAGTGT  886

seq1  GTTTAAAGTTGAGGCCTGGAACTGGGCATGTAGCACAATGGTGGGGCACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGTTGAGGCCTGGAACTGGGCATGTAGCACAATGGTGGGGCACT  936

seq1  TGCCTTCTGTGTGTGAGGTCCTGAGCCTGAAATCAAGTCCCACATAAAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTGTGTGTGAGGTCCTGAGCCTGAAATCAAGTCCCACATAAAGA  986

seq1  AAAGAGTTATAAAGAGAGGCTTTAATGCGCATGTCTGAATTTCACATTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTATAAAGAGAGGCTTTAATGCGCATGTCTGAATTTCACATTAT  1036

seq1  TATTATTATTATTATTATTATAGATGGGGGTCTCTCTTCATAGCCCTAGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTATTATAGATGGGGGTCTCTCTTCATAGCCCTAGC  1086

seq1  TGTCCTGGAATTC  1112
      |||||||||||||
seq2  TGTCCTGGAATTC  1099

seq1: chr3_9010692_9011536
seq2: B6Ng01-051G04.g_68_911

seq1  GAATTCCACGCCCCTAAGCCCCTTACCCCATAAAAACCCCTAGCTTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGCCCCTAAGCCCCTTACCCCATAAAAACCCCTAGCTTTCAA  50

seq1  GCCTCGTGGCCGACATTCATTATCTCCTGTGTGGGATGCATGTCAGTCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGTGGCCGACATTCATTATCTCCTGTGTGGGATGCATGTCAGTCCG  100

seq1  GAGCTCCGTAATTAAACGTCCTCATGTAATTACATCAAGAGATGGTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCGTAATTAAACGTCCTCATGTAATTACATCAAGAGATGGTCCTT  150

seq1  CGTGATTTTTTGGGTGCACACCAAATCGGGAATTGGGTGGGGGTTTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATTTTTTGGGTGCACACCAAATCGGGAATTGGGTGGGGGTTTCCCA  200

seq1  ACTAGATCTAACACTTATGAGTTCAAGGTCACCCTCAGCTATACAGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATCTAACACTTATGAGTTCAAGGTCACCCTCAGCTATACAGAGTT  250

seq1  CAAAACCAGCGTGGTGCACATGAGACCCAAAATAAAGCAGTGAGGAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAGCGTGGTGCACATGAGACCCAAAATAAAGCAGTGAGGAAGAA  300

seq1  TAAGACATACACATCTGTAATCCCAACTCTTAAGAAACTGAGGCCAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATACACATCTGTAATCCCAACTCTTAAGAAACTGAGGCCAAGCA  350

seq1  GGCCTTGGGCACAAACTCCGAAGCCAGACCCACAACACCCAGAGACAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGGGCACAAACTCCGAAGCCAGACCCACAACACCCAGAGACAGCT  400

seq1  CCACTCCCAGATGCTCTAACACGCCCAGGATCAGAGGATCACAGGATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCAGATGCTCTAACACGCCCAGGATCAGAGGATCACAGGATCCC  450

seq1  AGGAGCTTGGTCACACCAGGATCCCCAGTCTCAAAGGTAGCTTGACTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTTGGTCACACCAGGATCCCCAGTCTCAAAGGTAGCTTGACTCCC  500

seq1  AGGAATTCTGACACACCCAGAATCTCAGGATCCCAGAGACAGCTGGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTCTGACACACCCAGAATCTCAGGATCCCAGAGACAGCTGGACTC  550

seq1  TGAGGAGTTCTGACTCAATCAGGATTACAAGAAGGACAGGCTCCCATCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGTTCTGACTCAATCAGGATTACAAGAAGGACAGGCTCCCATCAG  600

seq1  ATATAGTGAGGACAAGGAGCTCTAGAGATAACCAGATGTCGGCAGGCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTGAGGACAAGGAGCTCTAGAGATAACCAGATGTCGGCAGGCAAG  650

seq1  CATAAGAACAGAAGCAACAGAAACCAAGGTTACTTGGCATCATCAGAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAACAGAAGCAACAGAAACCAAGGTTACTTGGCATCATCAGAACC  700

seq1  AAATTCTCCCACCATACCAAGTCCTGGATACCCCAACACACCAGAAAAGC  750
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAATTCTCCCACCATACCAAGTCCTGGATA-CCCAACACACCAGAAAAGC  749

seq1  AAGATTCAGATCTAAAAATCACCTCTCGTGATGATTATAGAGGACATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCAGATCTAAAAATCACCTCTCGTGATGATTATAGAGGACATTAA  799

seq1  GAAGGACATAAATAACTCGGGAGGCAGAGGCAGGCAGATTTCTGA  845
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACATAAATAACTCGGGAGGCAGAGGCAGGCAGATTTCTGA  844