BAC Information

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BAC

Clone NameB6Ng01-051G23
Chromosome3 (Build37)
Map Location 23,229,130 - 23,387,139
singlet/doubletdoublet
Overlap geneLOC100039548
Upstream geneLOC675593, LOC100040378, LOC623751
Downstream geneEG635702, EG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051G23.bB6Ng01-051G23.g
ACCDH875077DH875078
length6251,149
definitionDH875077|Mus musculus domesticus DNA, BAC clone: B6Ng01-051G23, 5' end.DH875078|Mus musculus domesticus DNA, BAC clone: B6Ng01-051G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,229,130 - 23,229,753)(23,385,714 - 23,387,139)
sequence
gaattctttgtttagctttaagccccattttttaatggggtcatttattt
tctggaatccaccttcttgacttctttgtatatattagatattagtcccc
tatctgatttaagataggtaaaaatccttttccaatctgttggtgacctt
tttatcttattgacagtgtcttttgccttacagaaactttgcaattttat
gaggtcccatttgtcgaatattgatcttacagcacaagtcattgctgttc
tattcaggatttttttccctgtggccatatctttgaggcttttccccact
ttctcctctataagtttcactgtctctggttttttttttttttttttttt
tttttgaggggggggttccaattcctctattcctttttttcccatttttt
attaggtatttagctcatttttatttccaatgctataccaaaagtccccc
atacccacccacccccactcccctacccacccactccccctttttggccc
tggcgttcccctgtactggggcatataaagtttgcaagtccagtgggcct
ctctttcaagtgatggcctaataagccatcttttgatatatttgcagcta
gagacaagagcttcggggtactggt
gaattccaaaggattttccagaattgtatatagtgacagggtatttgttt
atggctgtgggtgggactaaactctgattatgaacacaaactgttctgac
atgaaattgtaggtattcaggtaatacaatagtttagcttcctatgattc
atcaaaactcacaataaaagtaattaaatgtacacactgaaagaagatac
atttaaaacaaatctaaatagtaggcttttctttatgaagcttattatgt
tatcttgacgataaaaatacattttcacaaaattgtgctgttcttaacta
aaatccagagattgcataataagcgtatgctccttatcttaagtccagat
acatccaaagtggaaacatgaagttagttgaaaataaaaatgattattag
tgagggcatgccatttgagctttgcctctgcaaacagaagtctttgtccc
cacagtaaatcatctatatacatgtttgtcagtgtaagactcactgaata
aaccaccccatatttgaagaaatattatgcaatcatttttggtgagaaca
aaaatcatacatcagggagaacaacctttggttgtcatttgaaggaaaat
ggattttgatatgaaagagtgttgttcttttgatacagtactaaaagatt
agatcattttaattaactaagcagcacttttgagtacattttaaatgaat
taactgagtttctaaattgactttgtcataagcgtcacaaaacgctaaaa
tggaacaaagactattatttccatatctgtgtacctaagcaaccacaagg
cttaggaggtaatattgacaaccataaagaaaaagcaagtttgtggctca
gggcatcgtcaatgctattcaacagtgctacaagtgcctattggggatct
tcacatctacagtctggtagaatgaataaagggaatgttgaataggtatg
tctcccataaattcaagcctcaacaggatatgagaaagattgaaataatc
ttatcagaaccttatgacatttgtcctcatcagatcatgctggattaagc
tttgatttccaaagcattgaaacaaccggagagcaccaaatttcatggaa
actgaccactctcctacctaatggaccattgggttaaaaaaatagaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23229130_23229753
seq2: B6Ng01-051G23.b_42_666

seq1  GAATTCTTTGTTTAGCTTTAAGCCCCATTTTTTAATGGGGTCATTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTTTAAGCCCCATTTTTTAATGGGGTCATTTATTT  50

seq1  TCTGGAATCCACCTTCTTGACTTCTTTGTATATATTAGATATTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATCCACCTTCTTGACTTCTTTGTATATATTAGATATTAGTCCCC  100

seq1  TATCTGATTTAAGATAGGTAAAAATCCTTTTCCAATCTGTTGGTGACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTTAAGATAGGTAAAAATCCTTTTCCAATCTGTTGGTGACCTT  150

seq1  TTTATCTTATTGACAGTGTCTTTTGCCTTACAGAAACTTTGCAATTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTATTGACAGTGTCTTTTGCCTTACAGAAACTTTGCAATTTTAT  200

seq1  GAGGTCCCATTTGTCGAATATTGATCTTACAGCACAAGTCATTGCTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCCATTTGTCGAATATTGATCTTACAGCACAAGTCATTGCTGTTC  250

seq1  TATTCAGGATTTTTTTCCCTGTGGCCATATCTTTGAGGCTTTTCCCCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGGATTTTTTTCCCTGTGGCCATATCTTTGAGGCTTTTCCCCACT  300

seq1  TTCTCCTCTATAAGTTTCACTGTCTCTGGTTTTTTTTTTTTTTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCTATAAGTTTCACTGTCTCTGGTTTTTTTTTTTTTTTTTTTTT  350

seq1  TTTTTGAGGGGGGGGTTCCAATTCCTCTATTCCTTTTTTTCCCATTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGGGGGGGGTTCCAATTCCTCTATTCCTTTTTTTCCCATTTTTT  400

seq1  ATTAGGTATTTAGCTCATTTTTATTTCCAATGCTATACCAAAAGTCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTATTTAGCTCATTTTTATTTCCAATGCTATACCAAAAGTCCCCC  450

seq1  ATACCCACCCACCCCCACT-CCCTACCCACCCACTCCCCCTTTTTGGCCC  499
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGGCCC  500

seq1  TGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAGTGGGCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAGTGGGCCT  550

seq1  CTCTTTCAAGTGATGGCCTATTAGGCCATCTTTTGATACATATGCAGCTA  599
      |||||||||||||||||||| || |||||||||||||| || ||||||||
seq2  CTCTTTCAAGTGATGGCCTAATAAGCCATCTTTTGATATATTTGCAGCTA  600

seq1  GAGACAAGAGCTCCGGGGTACTGGT  624
      |||||||||||| ||||||||||||
seq2  GAGACAAGAGCTTCGGGGTACTGGT  625

seq1: chr3_23385714_23387139
seq2: B6Ng01-051G23.g_66_1214 (reverse)

seq1  GTTTCTATTTTTTTTTAATTTTTTTCTCTTTGTTTCTAAATGATTAATTT  50
                                                        
seq2  --------------------------------------------------  0

seq1  CAGCCCTGAATTTAATTATTTATTGCCATCTACTCCTCTTGAGAGTTTTT  100
                                                        
seq2  --------------------------------------------------  0

seq1  GCTTCTTTTTAGGATTTCAGGTGCAGTGTTAAGTTGCTAGTATGAGGCTT  150
                                                        
seq2  --------------------------------------------------  0

seq1  ATCCAATTTCTTTATCAAGGAACTTAGTGCTATGAACTTTCCTTTTAGTA  200
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCTATCGTTTTGACCCAGAAATGTACTTTCATTACACCTTCATTATAA  250
                                                        
seq2  --------------------------------------------------  0

seq1  TTGAATTACAGAAAGTCTTTCATTCCTTTCTTTAGTTCTTATTTTTTT-A  299
                                        |||  ||||||||| |
seq2  ----------------------------------GTTTCTATTTTTTTAA  16

seq1  CCCAATGGT-CATTAAGTA-GAGAGTTGTTCAGTTTCCATG-AATTTGGT  346
      ||||||||| ||||| ||| ||||| || |||||||||||| ||||||||
seq2  CCCAATGGTCCATTAGGTAGGAGAG-TGGTCAGTTTCCATGAAATTTGGT  65

seq1  GCTCT-CTGTTGTTTCAATTGCTTTTGAAATCAAGCTTTAATCCAGCATG  395
      ||||| | |||||||||| |||||| ||||||||   |||||||||||||
seq2  GCTCTCCGGTTGTTTCAA-TGCTTTGGAAATCAAAGCTTAATCCAGCATG  114

seq1  ATCTGATGA-GACAAATGTCATAAGTTTCTGATAAGATTATTTCAATC-T  443
      ||||||||| ||||||||||||||| |||||||||||||||||||||| |
seq2  ATCTGATGAGGACAAATGTCATAAGGTTCTGATAAGATTATTTCAATCTT  164

seq1  TCTCATAT-CTGTTGAGGCTTGAATTTATGGGAGACATACCTATTCAACA  492
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATCCTGTTGAGGCTTGAATTTATGGGAGACATACCTATTCAACA  214

seq1  TTCCCTTTATTCATTCTACCAGACTGTAGATGTGAAGATCCCC-ATAGGC  541
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTCCCTTTATTCATTCTACCAGACTGTAGATGTGAAGATCCCCAATAGGC  264

seq1  ACTTGTAGCACTGTTGAATAGCATTGACGATGCCCTGAGCCACAAACTTG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAGCACTGTTGAATAGCATTGACGATGCCCTGAGCCACAAACTTG  314

seq1  CTTTTTCTTTATGGTTGTCAATATTACCTCCTAAGCCTTGTGGTTGCTTA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTTATGGTTGTCAATATTACCTCCTAAGCCTTGTGGTTGCTTA  364

seq1  GGTACACAGATATGGAAATAATAGTCTTTGTTCCATTTTAGCGTTTTGTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACACAGATATGGAAATAATAGTCTTTGTTCCATTTTAGCGTTTTGTG  414

seq1  ACGCTTATGACAAAGTCAATTTAGAAACTCAGTTAATTCATTTAAAATGT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTTATGACAAAGTCAATTTAGAAACTCAGTTAATTCATTTAAAATGT  464

seq1  ACTCAAAAGTGCTGCTTAGTTAATTAAAATGATCTAATCTTTTAGTACTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAAGTGCTGCTTAGTTAATTAAAATGATCTAATCTTTTAGTACTG  514

seq1  TATCAAAAGAACAACACTCTTTCATATCAAAATCCATTTTCCTTCAAATG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAGAACAACACTCTTTCATATCAAAATCCATTTTCCTTCAAATG  564

seq1  ACAACCAAAGGTTGTTCTCCCTGATGTATGATTTTTGTTCTCACCAAAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAAAGGTTGTTCTCCCTGATGTATGATTTTTGTTCTCACCAAAAA  614

seq1  TGATTGCATAATATTTCTTCAAATATGGGGTGGTTTATTCAGTGAGTCTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCATAATATTTCTTCAAATATGGGGTGGTTTATTCAGTGAGTCTT  664

seq1  ACACTGACAAACATGTATATAGATGATTTACTGTGGGGACAAAGACTTCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGACAAACATGTATATAGATGATTTACTGTGGGGACAAAGACTTCT  714

seq1  GTTTGCAGAGGCAAAGCTCAAATGGCATGCCCTCACTAATAATCATTTTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAGAGGCAAAGCTCAAATGGCATGCCCTCACTAATAATCATTTTT  764

seq1  ATTTTCAACTAACTTCATGTTTCCACTTTGGATGTATCTGGACTTAAGAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAACTAACTTCATGTTTCCACTTTGGATGTATCTGGACTTAAGAT  814

seq1  AAGGAGCATACGCTTATTATGCAATCTCTGGATTTTAGTTAAGAACAGCA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCATACGCTTATTATGCAATCTCTGGATTTTAGTTAAGAACAGCA  864

seq1  CAATTTTGTGAAAATGTATTTTTATCGTCAAGATAACATAATAAGCTTCA  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTGTGAAAATGTATTTTTATCGTCAAGATAACATAATAAGCTTCA  914

seq1  TAAAGAAAAGCCTACTATTTAGATTTGTTTTAAATGTATCTTCTTTCAGT  1241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAAGCCTACTATTTAGATTTGTTTTAAATGTATCTTCTTTCAGT  964

seq1  GTGTACATTTAATTACTTTTATTGTGAGTTTTGATGAATCATAGGAAGCT  1291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACATTTAATTACTTTTATTGTGAGTTTTGATGAATCATAGGAAGCT  1014

seq1  AAACTATTGTATTACCTGAATACCTACAATTTCATGTCAGAACAGTTTGT  1341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTGTATTACCTGAATACCTACAATTTCATGTCAGAACAGTTTGT  1064

seq1  GTTCATAATCAGAGTTTAGTCCCACCCACAGCCATAAACAAATACCCTGT  1391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATAATCAGAGTTTAGTCCCACCCACAGCCATAAACAAATACCCTGT  1114

seq1  CACTATATACAATTCTGGAAAATCCTTTGGAATTC  1426
      |||||||||||||||||||||||||||||||||||
seq2  CACTATATACAATTCTGGAAAATCCTTTGGAATTC  1149