BAC Information

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BAC

Clone NameB6Ng01-052B02
Chromosome3 (Build37)
Map Location 122,952,902 - 122,953,479
singlet/doubletsinglet
Overlap genenone
Upstream geneGclm, Ppia-ps3_1245.1, Dnttip2, LOC675117, LOC100043726, Bcar3, Fnbp1l, Ppia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2
Downstream geneSec24d, G430022H21Rik, Prss12, EG668804, Ndst3, LOC100043333
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052B02.bB6Ng01-052B02.g
ACCDH875532DH875533
length842580
definitionDH875532|Mus musculus domesticus DNA, BAC clone: B6Ng01-052B02, 5' end.DH875533|Mus musculus domesticus DNA, BAC clone: B6Ng01-052B02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctataaagtaggtaagaattgtcaagtgaaaaagtaggtaagaat
tgtcaagtgaatgatcaattttctgaagtagataaaggataggtaattgt
agcctaagacagcaacttgtaaaggcaacacaatgtctaagcccttctaa
gcatggggccggggcgggaggaggaaggaagtaggagaagaaaacagaaa
acccccataatgtgcatgtctgaagtacttatgcatctaatctagccatt
aaaaaccaaaaacaccagagaaggagtgggaaagaagtttttaacaaata
atcgaaatgttcctctcaaacttcgcttgatttgtggcttgggaatcatt
ttatccggccatggtggctatgtttaatctcagcactcagggaggccgag
actagaaaaaaaaaaaaaagaaatcattgtatggaatattattagtctgc
cactctctctctctctctctctctctctctctctctctctctcactcaca
ctcacacacagacactcacagattgataaaaaagaaaactgttgttgggt
aacccaaaacagtgcatagttagtcccaaatgcttgctgttgcctgtatt
cttatttaatactttctttttaaagatagaccaattttttttttattcta
ctgacatacaatgaacattccctcaaggcctacaatcctttcaatttgag
ctttacttctctagtggaaaggtttcatttaaagccttgcttctgattta
ttacaactactcagagatatttcaagcctatgtatgtactagattcgtag
caaggctggagcagtaagaaaaggtagaggaaaattaataaa
gaattcatttgtacaaacaatgtctgtgatcttatgttcaactgccctat
tgaactgggaaagctatctatcacctctggctcttatcatctctctgatc
cctcattcttgaaggtccctgagccttgtaggtaaggttgtgatatagat
actccatttagggctcagcactctgaagtctcttttgggacgctctgtat
taatgacaatttactaacaggagaatgttgaacattcccctcctcttcca
cttattcttttttttttaattaactatttttttctttttgaggttataat
ataatcgaattgtttccccattccatttcctaccctcatatcctccctcc
aaaccccttgccccatgctctcttccaaattcatgatcggtttttattat
tcaatattgaattattgttgttattggtggtggtggtggtggtccagtgt
gtattcctaaatattacaggatctgggatagttacgaggttagatgtagg
atgagatggtccttgtacacatttttaaaaaatgtttctcagccatttgc
atttcatctttctttttcccatgtccacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_122952902_122953479
seq2: B6Ng01-052B02.g_67_646 (reverse)

seq1  ACGTGGACATGGAAATAAGAAAGATGAAATGCAAATGGCTGAGAAACATT  50
      |||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  ACGTGGACATGGGAAAAAGAAAGATGAAATGCAAATGGCTGAGAAACATT  50

seq1  TTT--AAAATGTTTACAAGGACCATCTCATCCTACATCTAACCTCGTAAC  98
      |||  ||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATGTGTACAAGGACCATCTCATCCTACATCTAACCTCGTAAC  100

seq1  TATCCCAGATCCTGTAATATTTAGGAATACACACTGGACCACCACCACCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAGATCCTGTAATATTTAGGAATACACACTGGACCACCACCACCA  150

seq1  CCACCAATAACAACAATAATTCAATATTGAATAATAAAAACCGATCATGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAATAACAACAATAATTCAATATTGAATAATAAAAACCGATCATGA  200

seq1  ATTTGGAAGAGAGCATGGGGCAAGGGGTTTGGAGGGAGGATATGAGGGTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAAGAGAGCATGGGGCAAGGGGTTTGGAGGGAGGATATGAGGGTA  250

seq1  GGAAATGGAATGGGGAAACAATTCGATTATATTATAACCTCAAAAAGAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGGAATGGGGAAACAATTCGATTATATTATAACCTCAAAAAGAAA  300

seq1  AAAATAGTTAATTAAAAAAAAAAGAATAAGTGGAAGAGGAGGGGAATGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGTTAATTAAAAAAAAAAGAATAAGTGGAAGAGGAGGGGAATGTT  350

seq1  CAACATTCTCCTGTTAGTAAATTGTCATTAATACAGAGCGTCCCAAAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTCTCCTGTTAGTAAATTGTCATTAATACAGAGCGTCCCAAAAGA  400

seq1  GACTTCAGAGTGCTGAGCCCTAAATGGAGTATCTATATCACAACCTTACC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAGAGTGCTGAGCCCTAAATGGAGTATCTATATCACAACCTTACC  450

seq1  TACAAGGCTCAGGGACCTTCAAGAATGAGGGATCAGAGAGATGATAAGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGCTCAGGGACCTTCAAGAATGAGGGATCAGAGAGATGATAAGAG  500

seq1  CCAGAGGTGATAGATAGCTTTCCCAGTTCAATAGGGCAGTTGAACATAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGTGATAGATAGCTTTCCCAGTTCAATAGGGCAGTTGAACATAAG  550

seq1  ATCACAGACATTGTTTGTACAAATGAATTC  578
      ||||||||||||||||||||||||||||||
seq2  ATCACAGACATTGTTTGTACAAATGAATTC  580