BAC Information

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BAC

Clone NameB6Ng01-052O22
Chromosome3 (Build37)
Map Location 132,418,569 - 132,419,681
singlet/doubletsinglet
Overlap geneA630047E20Rik
Upstream geneOlfr375-ps1, Dkk2, LOC100039018, EG433653, LOC668857, Scye1
Downstream geneLOC668858, Npnt, Gstcd, Ints12, 9130221D24Rik, Ppa2, E130014J05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052O22.bB6Ng01-052O22.g
ACCDH876138DH876139
length1,1121,211
definitionDH876138|Mus musculus domesticus DNA, BAC clone: B6Ng01-052O22, 5' end.DH876139|Mus musculus domesticus DNA, BAC clone: B6Ng01-052O22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatgacagttaacttcaagaatttttagaaatagctaagagga
gagattactacatttatattattaagaaggcagcatattatatttgaata
aaaagcaagaagcataataataacaacaacaataataatagtattaataa
catttacaatttatattgcatctgtcttatgctgctttaattctttatct
gtactaatttaacacagtgatctattgacaggaaatatggtcattatcag
agttagagatgaggaaatgaaaccacttctctacggttcccatgacctag
tttgttaaaccttcagtgggattttactgcaacacaatgtatttagttag
ttaaactcaatgctgatcctggccttaaaattagaagtacaatatagtta
gcctatctattctttgtaggtagactaacatacaatttgtttcaaaagtg
ctcgacactattattgtctaatactctgaacatgttagtttgtgtatggt
ctgcatttacattttagggttgtcaatggctacttccaaagttcttcaag
caactttcaagttgggaacttagcatgccaaaaaatgaaattctttaaat
ctacttgagaaaaatatcccacccaggtacaatatcattaaaaatgaaac
atgggccacttaagggtaaatgcatttctcatgagcttttctcaggaaga
ggaatcacatccagtgagtaaagcgtgctgagcaagcagaacagcacagt
gggtcagggcgctgcccatcagtagatgcatcctggtttcaaaggcgaag
agagggctgcacttcaactacttagttctaacacacggacatgctagggc
tctgccttcagaggtctttattacaaactgcactagctgagttagcactg
gtcacaaatttgcctataagccatcatcacagatgttttcaccagcattt
gtgggacacttacgcttgggaggaaagccaccagtttactagatttgaaa
atacacaatcagcattcccaacatacttattttttataactgaccgaaaa
attcctttaatcctgatcaatcctcctctgcttcctttgacaaagcctgg
atgaaaggaaac
gaattctcctctaccaataaccttagtgaaagttgctttaatttagctcc
acaagatatttaagacaggggcaacatgcagctagattatttgttcaaat
attacaagagtggtctagagcccagctgctaatagtaatattgttcccct
ctaaatccttgagcagagcctatgtattccaaatctccattagcagtact
gccttccacacttctaatagggtggtccattaagtcccatttaaagattt
caatgacttttctactccaaactcccaaaagtcttccatattcctttaag
caacaacatgcccaggcctgtcctaacaaaaccccactccagataccaac
ttctgtctgttatttacttatttactgttctgttgctgtgaagagatgcc
atgaccaagacaaactatttaaaatgacatttaattgtgggcttgtttat
agttccagaaagttatgcatggtactggtctgtaggcaacaggtggagaa
agagagacactgggcctggcacaggcttttgaaacctcaaagcccacccc
tagtgacacacctcttctaacaaggccacacttcctaatccatcccacta
actaatagttccactaactaggaaccaaacatccaaatatatgagcctat
ggaggacattctcatttaaataactacatccttcctttcttgtttatccc
caagatcccacattaatatcacaatataacacataaataaccataaaatt
cccagtgttttaggaattcaaatacttcagtaaattcagtctctataaaa
tatctaatatgtctttaaaagtcacaattgtgggttcctgtcaaatcaaa
attaagcacatacttttcgtactccaagagagaagaaccagagcacagac
acaatcatatcaaagtaaaaccaaaattcaacagtgtaaaaagtacaatg
cctggcatctcctacctactcatgatctctgggctccaaatggcctgggc
agctccacctcctccaggcttccatctgcagcaacaacagtggtgtctca
ggggttaggaatgggcctctggtggcagcactcttaactaactggctgtc
ctttgtagttgtcctcacagttctaacgctcttcaatatgctggaatctt
ccactgccagctaaagcgtggaacttccaccaaatgggcctcccttgggt
gttgttgtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132418569_132419681
seq2: B6Ng01-052O22.b_46_1157 (reverse)

seq1  GTTTCCCTGTCATCCCAGCTTTGTCAAAGGAAGCAGAGGAGGATTGATCA  50
      |||| ||| ||||||  |||||||||||||||||||||||||||||||||
seq2  GTTT-CCTTTCATCCAGGCTTTGTCAAAGGAAGCAGAGGAGGATTGATCA  49

seq1  GGATTAAAGGAATTTTTCGGTCAGTTAT-AAAAATAAGTATGTTGGGAAT  99
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGATTAAAGGAATTTTTCGGTCAGTTATAAAAAATAAGTATGTTGGGAAT  99

seq1  GCTGATTGTGTATTTTCAAATCTAGTAAACTTGGTGGCTTTCCTTCCAAG  149
      |||||||||||||||||||||||||||||| ||||||||||||| |||||
seq2  GCTGATTGTGTATTTTCAAATCTAGTAAAC-TGGTGGCTTTCCTCCCAAG  148

seq1  CGTAAGTGTCCCACAAATGCTGGTGAAAACATCTGTGATGATGGCTTATA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAGTGTCCCACAAATGCTGGTGAAAACATCTGTGATGATGGCTTATA  198

seq1  GGCAAATTTGTGACCAGTGCTAACTCAGCTAGTGCAGTTTGTAATAAAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATTTGTGACCAGTGCTAACTCAGCTAGTGCAGTTTGTAATAAAGA  248

seq1  CCTCTGAAGGCAGAGCCCTAGCATGTCCGTGTGTTAGAACTAAGTAGTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAAGGCAGAGCCCTAGCATGTCCGTGTGTTAGAACTAAGTAGTTG  298

seq1  AAGTGCAGCCCTCTCTTCGCCTTTGAAACCAGGATGCATCTACTGATGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCAGCCCTCTCTTCGCCTTTGAAACCAGGATGCATCTACTGATGGG  348

seq1  CAGCGCCCTGACCCACTGTGCTGTTCTGCTTGCTCAGCACGCTTTACTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCCCTGACCCACTGTGCTGTTCTGCTTGCTCAGCACGCTTTACTCA  398

seq1  CTGGATGTGATTCCTCTTCCTGAGAAAAGCTCATGAGAAATGCATTTACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGTGATTCCTCTTCCTGAGAAAAGCTCATGAGAAATGCATTTACC  448

seq1  CTTAAGTGGCCCATGTTTCATTTTTAATGATATTGTACCTGGGTGGGATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTGGCCCATGTTTCATTTTTAATGATATTGTACCTGGGTGGGATA  498

seq1  TTTTTCTCAAGTAGATTTAAAGAATTTCATTTTTTGGCATGCTAAGTTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCAAGTAGATTTAAAGAATTTCATTTTTTGGCATGCTAAGTTCC  548

seq1  CAACTTGAAAGTTGCTTGAAGAACTTTGGAAGTAGCCATTGACAACCCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGAAAGTTGCTTGAAGAACTTTGGAAGTAGCCATTGACAACCCTA  598

seq1  AAATGTAAATGCAGACCATACACAAACTAACATGTTCAGAGTATTAGACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAATGCAGACCATACACAAACTAACATGTTCAGAGTATTAGACA  648

seq1  ATAATAGTGTCGAGCACTTTTGAAACAAATTGTATGTTAGTCTACCTACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGTGTCGAGCACTTTTGAAACAAATTGTATGTTAGTCTACCTACA  698

seq1  AAGAATAGATAGGCTAACTATATTGTACTTCTAATTTTAAGGCCAGGATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAGATAGGCTAACTATATTGTACTTCTAATTTTAAGGCCAGGATC  748

seq1  AGCATTGAGTTTAACTAACTAAATACATTGTGTTGCAGTAAAATCCCACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGAGTTTAACTAACTAAATACATTGTGTTGCAGTAAAATCCCACT  798

seq1  GAAGGTTTAACAAACTAGGTCATGGGAACCGTAGAGAAGTGGTTTCATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTTAACAAACTAGGTCATGGGAACCGTAGAGAAGTGGTTTCATTT  848

seq1  CCTCATCTCTAACTCTGATAATGACCATATTTCCTGTCAATAGATCACTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCTCTAACTCTGATAATGACCATATTTCCTGTCAATAGATCACTG  898

seq1  TGTTAAATTAGTACAGATAAAGAATTAAAGCAGCATAAGACAGATGCAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATTAGTACAGATAAAGAATTAAAGCAGCATAAGACAGATGCAAT  948

seq1  ATAAATTGTAAATGTTATTAATACTATTATTATTGTTGTTGTTATTATTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTGTAAATGTTATTAATACTATTATTATTGTTGTTGTTATTATTA  998

seq1  TGCTTCTTGCTTTTTATTCAAATATAATATGCTGCCTTCTTAATAATATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTGCTTTTTATTCAAATATAATATGCTGCCTTCTTAATAATATA  1048

seq1  AATGTAGTAATCTCTCCTCTTAGCTATTTCTAAAAATTCTTGAAGTTAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTAATCTCTCCTCTTAGCTATTTCTAAAAATTCTTGAAGTTAAC  1098

seq1  TGTCATAAGAATTC  1113
      ||||||||||||||
seq2  TGTCATAAGAATTC  1112