BAC Information

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BAC

Clone NameB6Ng01-053B18
Chromosome3 (Build37)
Map Location 84,647,057 - 84,757,162
singlet/doubletdoublet
Overlap geneLOC624889, Fbxw7
Upstream geneD930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, Arfip1, EG667788, EG627369, Tigd4, Tmem154
Downstream geneDear1, LOC100042237, LOC100042125, Pet112l, 9930021J17Rik, Glt28d2, LOC100042265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053B18.bB6Ng01-053B18.g
ACCDH876254DH876255
length1,1511,094
definitionDH876254|Mus musculus domesticus DNA, BAC clone: B6Ng01-053B18, 5' end.DH876255|Mus musculus domesticus DNA, BAC clone: B6Ng01-053B18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,756,007 - 84,757,162)(84,647,057 - 84,648,159)
sequence
gaattcactgagaagggtttatgtttaaattattttacaaaacaaagcat
cttctgaatgactgtggaaatcttttaaatactgtaatgttaactgaaaa
tactgactttataaccaaaaattaattgggtaatttttttaagataccac
aagtagtccaatctcttcaaacataaaccctacacgtttcagtgactaca
ctccaagagttaactaaggaacacatacgtatgactatggtacaggaaaa
ctgaacagaaaggttcacggaaagccaagtgaggctgagtatttccaggt
cagcatttaacggagctacatttctggagtctcagatacgttttcagtga
aaaaatctcagatggaaatgtacattttattttaaagcttcccccagctc
acaccatcgctccatacttgcttacaacagtcatgaaataaagcagaata
ccagaatccaaccacccaccaaaattagaggatgctgcagccatctctga
tgatacagattttccttctcaggcacacacacacacacacacacacacac
acacacacacacacacaaccacacagcacaggaagaaaacagattactta
ctttgtaaaaaatcatttttaatgtgccgtagaaacccatattttctgta
tttttccccttcagggattctgtgcccccgtgtgtccggctgcttggcag
tctctgacaatataaccccttttcaggtaggtatgtcacagattctaacg
tggacatgctcaggcacgccagaaaaggaagattaggcagcggaaccggc
agcaaaactccccagcaccagcagacgcagctcagaaccagaacgctgct
cgggacgcacacacgcatgcagctccactgaggagaactcggggaataat
gagcgagaacccacagattattggaggagactatgccctgtcaaagcctt
gactgaacagattcctccctcagcagcagagggatcagattacatctccc
ttgaacacagatgttgcagtccagggttcagcatgcagactgcacatcaa
ttatatggtgatctgctccagggagcccgtaagcaaccatacgcactgaa
cagagggcgacgtgggcagcaagaaccgccccccaccacaagccctctcc
c
gaattcagtacatttgaataatacaaagacaacctttacacaatgcacag
aaagattatcccaatagtagatacactttttttttttttttttaaagttt
gcgtcttctgtaatgtacttttaaagctagaggtagatgtgtctggagta
gttaccacaccagactttctttctcttctttgattaagtccagcagcatt
aagttcttcatgtctgatgaccacaggaataaggagtatttctgctggca
tttatcccgctgactgttaggatttgcacaatacatggtgatgcccagag
aattgctttaaagtcagaggaataagcccatgtaaaaaaggaggagacac
ttgagcaatcctgtaagcttttcttttgagagaattcgtccagtagtttg
tttgtgtaatgaattctgtgacaataattttaggaccactggtcctgaag
agagttttgtgattaagttgaagaaacaccatatactgtaactatagcct
attaagattcatagtgcacattaatatgctaagggttctgagccatctct
tgaaaaagaagtttaccaaagcttgcttatcctgtatttcttaagtgtct
tggacaatggaattctttcattcaagcttctctgtcctgtgataaatgct
gccctctagaggcataaattcaccggctcttcaatttgagcaccttaatt
taatacttagtgagtagtaagtggctcttaacaccaagtgcacaagagtg
gaatagcctagtagaaaaagatggtctgatttattttaagaaaatgtatg
ctctaaattggctttattatgtttactacaatcatctttgtaatcagttc
tctctttggtggcacttgggatgggatctagggctttgcatgtgctctgt
ggaccttctactatttcactgtgctggattaacattcttttaatagaaga
aatttgttaccggttattttttattacatttaattttgggacacataaat
aagagttccgaagaatacttccagatcagttcttacctcctcctggggat
caattcaggtatcaggcttcatcagacacttgaccgctgactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_84756007_84757162
seq2: B6Ng01-053B18.b_43_1193 (reverse)

seq1  GGGAGAGGGGCTGTGGTGTGGGGGCGGTCTCTGCTGCCCACGTCCGCCCT  50
      |||||||||  ||||||| |||||||||   |||||||||||| ||||||
seq2  GGGAGAGGGCTTGTGGTG-GGGGGCGGTTCTTGCTGCCCACGT-CGCCCT  48

seq1  CTGTTCAGTGCGT-TGTGTGCTTACGGGCTCCCTGGAGCAGATCACCATA  99
      ||||||||||||| ||  ||||||||||||||||||||||||||||||||
seq2  CTGTTCAGTGCGTATGGTTGCTTACGGGCTCCCTGGAGCAGATCACCATA  98

seq1  TAATTGATGTGCAGTCTGCATTGCTGAACCCTGGACTGCACCATTCTGTG  149
      |||||||||||||||||||| ||||||||||||||||||| || ||||||
seq2  TAATTGATGTGCAGTCTGCA-TGCTGAACCCTGGACTGCAACA-TCTGTG  146

seq1  TTCAAGGGAAGATGTAATCTGATCCCTCTGCTGCTGAGGGAGGAATCTGT  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGG-AGATGTAATCTGATCCCTCTGCTGCTGAGGGAGGAATCTGT  195

seq1  TCAGTCAAGGCTTTGACAGGGCATAGTCTCCTCCAATAATCTTGTGGGTT  249
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCAGTCAAGGCTTTGACAGGGCATAGTCTCCTCCAATAATC-TGTGGGTT  244

seq1  CTCGCTCATTATTCCCCGAGTTCTCCTCAGTGGAGCTGCATGCGTGTGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTCATTATTCCCCGAGTTCTCCTCAGTGGAGCTGCATGCGTGTGTG  294

seq1  CGTCCCGAGCAGCGTTCTGGTTCTGAGCTGCGTCTGCTGGTGCTGGGGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCGAGCAGCGTTCTGGTTCTGAGCTGCGTCTGCTGGTGCTGGGGAG  344

seq1  TTTTGCTGCCGGTTCCGCTGCCTAATCTTCCTTTTCTGGCGTGCCTGAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTGCCGGTTCCGCTGCCTAATCTTCCTTTTCTGGCGTGCCTGAGC  394

seq1  ATGTCCACGTTAGAATCTGTGACATACCTACCTGAAAAGGGGTTATATTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCACGTTAGAATCTGTGACATACCTACCTGAAAAGGGGTTATATTG  444

seq1  TCAGAGACTGCCAAGCAGCCGGACACACGGGGGCACAGAATCCCTGAAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGACTGCCAAGCAGCCGGACACACGGGGGCACAGAATCCCTGAAGG  494

seq1  GGAAAAATACAGAAAATATGGGTTTCTACGGCACATTAAAAATGATTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAATACAGAAAATATGGGTTTCTACGGCACATTAAAAATGATTTTT  544

seq1  TACAAAGTAAGTAATCTGTTTTCTTCCTGTGCTGTGTGGTTGTGTGTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTAAGTAATCTGTTTTCTTCCTGTGCTGTGTGGTTGTGTGTGTG  594

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTGAGAAGGAAAATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTGAGAAGGAAAATC  644

seq1  TGTATCATCAGAGATGGCTGCAGCATCCTCTAATTTTGGTGGGTGGTTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATCAGAGATGGCTGCAGCATCCTCTAATTTTGGTGGGTGGTTGG  694

seq1  ATTCTGGTATTCTGCTTTATTTCATGACTGTTGTAAGCAAGTATGGAGCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGTATTCTGCTTTATTTCATGACTGTTGTAAGCAAGTATGGAGCG  744

seq1  ATGGTGTGAGCTGGGGGAAGCTTTAAAATAAAATGTACATTTCCATCTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTGAGCTGGGGGAAGCTTTAAAATAAAATGTACATTTCCATCTGA  794

seq1  GATTTTTTCACTGAAAACGTATCTGAGACTCCAGAAATGTAGCTCCGTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTCACTGAAAACGTATCTGAGACTCCAGAAATGTAGCTCCGTTA  844

seq1  AATGCTGACCTGGAAATACTCAGCCTCACTTGGCTTTCCGTGAACCTTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGACCTGGAAATACTCAGCCTCACTTGGCTTTCCGTGAACCTTTC  894

seq1  TGTTCAGTTTTCCTGTACCATAGTCATACGTATGTGTTCCTTAGTTAACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGTTTTCCTGTACCATAGTCATACGTATGTGTTCCTTAGTTAACT  944

seq1  CTTGGAGTGTAGTCACTGAAACGTGTAGGGTTTATGTTTGAAGAGATTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGTGTAGTCACTGAAACGTGTAGGGTTTATGTTTGAAGAGATTGG  994

seq1  ACTACTTGTGGTATCTTAAAAAAATTACCCAATTAATTTTTGGTTATAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTGTGGTATCTTAAAAAAATTACCCAATTAATTTTTGGTTATAAA  1044

seq1  GTCAGTATTTTCAGTTAACATTACAGTATTTAAAAGATTTCCACAGTCAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTATTTTCAGTTAACATTACAGTATTTAAAAGATTTCCACAGTCAT  1094

seq1  TCAGAAGATGCTTTGTTTTGTAAAATAATTTAAACATAAACCCTTCTCAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGATGCTTTGTTTTGTAAAATAATTTAAACATAAACCCTTCTCAG  1144

seq1  TGAATTC  1156
      |||||||
seq2  TGAATTC  1151

seq1: chr3_84647057_84648159
seq2: B6Ng01-053B18.g_67_1160

seq1  GAATTCAGTACATTTGAATAATACAAAGACAACCTTTACACAATGCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACATTTGAATAATACAAAGACAACCTTTACACAATGCACAG  50

seq1  AAAGATTATCCCAATAGTAGATACACTTTTTTTTTTTTTTTTTAAAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTATCCCAATAGTAGATACACTTTTTTTTTTTTTTTTTAAAGTTT  100

seq1  GCGTCTTCTGTAATGTACTTTTAAAGCTAGAGGTAGATGTGTCTGGAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCTTCTGTAATGTACTTTTAAAGCTAGAGGTAGATGTGTCTGGAGTA  150

seq1  GTTACCACACCAGACTTTCTTTCTCTTCTTTGATTAAGTCCAGCAGCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCACACCAGACTTTCTTTCTCTTCTTTGATTAAGTCCAGCAGCATT  200

seq1  AAGTTCTTCATGTCTGATGACCACAGGAATAAGGAGTATTTCTGCTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTCATGTCTGATGACCACAGGAATAAGGAGTATTTCTGCTGGCA  250

seq1  TTTATCCCGCTGACTGTTAGGATTTGCACAATACATGGTGATGCCCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCCGCTGACTGTTAGGATTTGCACAATACATGGTGATGCCCAGAG  300

seq1  AATTGCTTTAAAGTCAGAGGAATAAGCCCATGTAAAAAAGGAGGAGACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTTAAAGTCAGAGGAATAAGCCCATGTAAAAAAGGAGGAGACAC  350

seq1  TTGAGCAATCCTGTAAGCTTTTCTTTTGAGAGAATTCGTCCAGTAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCAATCCTGTAAGCTTTTCTTTTGAGAGAATTCGTCCAGTAGTTTG  400

seq1  TTTGTGTAATGAATTCTGTGACAATAATTTTAGGACCACTGGTCCTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTAATGAATTCTGTGACAATAATTTTAGGACCACTGGTCCTGAAG  450

seq1  AGAGTTTTGTGATTAAGTTGAAGAAACACCATATACTGTAACTATAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTGTGATTAAGTTGAAGAAACACCATATACTGTAACTATAGCCT  500

seq1  ATTAAGATTCATAGTGCACATTAATATGCTAAGGGTTCTGAGCCATCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGATTCATAGTGCACATTAATATGCTAAGGGTTCTGAGCCATCTCT  550

seq1  TGAAAAAGAAGTTTACCAAAGCTTGCTTATCCTGTATTTCTTAAGTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGAAGTTTACCAAAGCTTGCTTATCCTGTATTTCTTAAGTGTCT  600

seq1  TGGACAATGGAATTCTTTCATTCAAGCTTCTCTGTCCTGTGATAAATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAATGGAATTCTTTCATTCAAGCTTCTCTGTCCTGTGATAAATGCT  650

seq1  GCCCTCTAGAGGCATAAATTCACCGGCTCTTCAATTTGAGCACCTTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTAGAGGCATAAATTCACCGGCTCTTCAATTTGAGCACCTTAATT  700

seq1  TAATACTTAGTGAGTAGTAAGTGGCTCTTAACACCAAGTGCACAAGAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTAGTGAGTAGTAAGTGGCTCTTAACACCAAGTGCACAAGAGTG  750

seq1  GAATAGCCTAGTAGAAAAAGATGGTCTGATTTAATTTTAAGAAAATGTAT  800
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAATAGCCTAGTAGAAAAAGATGGTCTGATTT-ATTTTAAGAAAATGTAT  799

seq1  GCTCTAAATTGGCTTTATTATGTTTACTACAATCATCTTTGTAATCAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAAATTGGCTTTATTATGTTTACTACAATCATCTTTGTAATCAGTT  849

seq1  CTCTCTTTGGTGGCACTTGGGATGGGATCTAGGGCTTTGCATGTGCTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTGGTGGCACTTGGGATGGGATCTAGGGCTTTGCATGTGCTCTG  899

seq1  TGGACCTTCTACTA-TTCACTGTGCTGGAATAACATTCTTTTAATAGAAG  949
      |||||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  TGGACCTTCTACTATTTCACTGTGCTGGATTAACATTCTTTTAATAGAAG  949

seq1  AAA-TTGTTACCGTTTAATTTTTATTACATTTTAATTTTGGGAACACATA  998
      ||| ||||||||| ||| ||||||||||| |||||||||||| |||||||
seq2  AAATTTGTTACCGGTTATTTTTTATTACA-TTTAATTTTGGG-ACACATA  997

seq1  CAT-AGAGTTCAG-AGAATAACTTCCAAGAATCAGTTCTTACCTCCTCCT  1046
       || ||||||| | ||||| |||||||   ||||||||||||||||||||
seq2  AATAAGAGTTCCGAAGAAT-ACTTCCA--GATCAGTTCTTACCTCCTCCT  1044

seq1  GGGGATCAAATTCAGGTAATCAGGCTTTTCATCAAGCACCTTGACCTGCT  1096
      ||||||| ||||||||| |||||||  |||||||  || ||||||| |||
seq2  GGGGATC-AATTCAGGT-ATCAGGC--TTCATCAGACA-CTTGACC-GCT  1088

seq1  GAACTGT  1103
      | |||||
seq2  G-ACTGT  1094