BAC Information

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BAC

Clone NameB6Ng01-053E08
Chromosome3 (Build37)
Map Location 15,493,805 - 15,494,718
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1
Downstream geneLOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3, LOC100040034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053E08.bB6Ng01-053E08.g
ACCDH876368DH876369
length1,241914
definitionDH876368|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E08, 5' end.DH876369|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctttggtcacccaatcagagggactagaggtgcatgcttg
acagccgatgacattgtaaaaggggtagaaaccataagcatttgaagagt
atctttatgtaacttccttgttccagcaggacctgctgggcttgattgca
tatacagtacttccattagctaatagactaccagtgtgcatgtcctactt
tataacttgagaggctttatcataaccatttcatgaagggcagttcaggt
tgcatggtaacttggggtactattgtcagatgttcattttccaataaggt
cctatggcaggccaagagtggtttttcaaagtgagaatagttttctgcaa
atgatggtacagctttgtttcaaaatcccaatgatctcttctgtgattca
cctacagtgtcctggcagaggctccaaatagcatctttcactgtcactga
taacttaagtactattgggtcttctggatcatatggtccaagtggtagag
gagcctgaatctattggtgtgccttctcctatcccaggccgcacaaaaag
atagcagctttctgagtcacttcttaaattcacctgggtaacacactcaa
atgaaaagatgtgctgtctccagaatccaaatagacctacttaacttttt
gcttctttcttggtggtgggagtagccaggtgaaataactcatctttcac
cttagaagcaatatctgtgcatgccctataccactggactcctaagaatt
ctactgagtctttgaaatttggttggatttatttcctatcctctgatatg
tatatgtgttaccaatgagtcccaagtggttactacctcctgctcactta
gttcaagaagaataatctcatcaatatagtgcaccaatgtgatatttgtg
gaacagacagaaaatcaatattttttctaactcagttatgacatagggca
ggagagttactatatctttaaaggaaaactgtacagtattctactggcct
caccaaatgaaagcaaatgattctggaagatcttatgggcaggtactaag
aagccattttgtagatcaaatactacataccaggatacggaagaatatag
tttattttccaaatacaacctgagccgtgtacagcagcgggcatgggata
taccctgaaattatttcaaggttaaccgtcattccatgatataatctctc
ggaacggccaaggagaggttaatgggagatttgggggaaac
gaattctcacattgattccttgacctgtggagtgaaggtgttatgacccc
caggggcccagatgttgagaacatgacccccagaaacacagcttgacaat
agattgctgcaatggcactaggtttttgttccaatgtgcatggggttgct
cagcctcacagagaaagtcaaccccgattgctaacagtacagtttttttt
taatactcttttttttgggggggggaggctacagaactttattattatta
gctagcaaagtaacagttttttttttttttttttacttttggtggtcagc
tattggtgtgtcagaaactttttcatcaaggtcggtttatcttcaaattc
aaactgaggctggggtcccagggattgctaattttttatggctaattttt
gatagcagctagtcttgctctggcagttgtggtcatgttgactgttagtg
agtgccctcagacagggtagggtctgggtagtcttgaactcatttacaat
ggcagggaaaggcttgtttatactggcagggacagggagaattcctcaag
cagcagggggaagggaaaagcttctgcaaacagctttggctcacattagc
cagaccaaaactatattatttcttcaaaggcttttatggttaggaaggct
aaatggatgccttagggttgcttctgcccatgaaaatagtgaattaaaaa
caatatcttattcttggaggaattgcagtaaatgctccccaccatcgagg
acttgaaagaagcagaagtggtggtttcaccacatatccattaaactttc
ctatctggccagttcagaagacatatatatcatggagaatgacagttaac
tattgaaaattaaatcatgtaataataccaattgcagctgctgtaccaga
tctagttttgtaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15493805_15494718
seq2: B6Ng01-053E08.g_69_982 (reverse)

seq1  ATTACAAAACTAGATCTGGTACAGCAGCTGCAATTGGTATTATTACCTGA  50
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTACAAAACTAGATCTGGTACAGCAGCTGCAATTGGTATTATTACATGA  50

seq1  TTTAATTTTCAATAGTTAACTGTCATTCTCCATGATATATATGTCTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTCAATAGTTAACTGTCATTCTCCATGATATATATGTCTTCTG  100

seq1  AACTGGCCAGATAGGAAAGTTTAATGGATATGTGGTGGAAACCACCACTT  150
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AACTGGCCAGATAGGAAAGTTTAATGGATATGTGGT-GAAACCACCACTT  149

seq1  CTGCTTCTTTCAAGTCCTCGATGGT-GGGAGCATTTACTGCAATTCCTCC  199
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGCTTCTTTCAAGTCCTCGATGGTGGGGAGCATTTACTGCAATTCCTCC  199

seq1  AAGAATAAGATATTGTTTTTAATTCACTATTTTCATGGGCAGAAGCAACC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAGATATTGTTTTTAATTCACTATTTTCATGGGCAGAAGCAACC  249

seq1  CTAAGGCATCCATTTAGCCTTCCTAACCATAAAAGCCTTTGAAGAAATAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCATCCATTTAGCCTTCCTAACCATAAAAGCCTTTGAAGAAATAA  299

seq1  TATAGTTTTGGTCTGGCTAATGTGAGCCAAAGCTGTTTGCAGAAGCTTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTTGGTCTGGCTAATGTGAGCCAAAGCTGTTTGCAGAAGCTTTT  349

seq1  CCCTTCCCCCTGCTGCTTGAGGAATTCTCCCTGTCCCTGCCAGTATAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCCCCTGCTGCTTGAGGAATTCTCCCTGTCCCTGCCAGTATAAAC  399

seq1  AAGCCTTTCCCTGCCATTGTAAATGAGTTCAAGACTACCCAGACCCTACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTCCCTGCCATTGTAAATGAGTTCAAGACTACCCAGACCCTACC  449

seq1  CTGTCTGAGGGCACTCACTAACAGTCAACATGACCACAACTGCCAGAGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGAGGGCACTCACTAACAGTCAACATGACCACAACTGCCAGAGCA  499

seq1  AGACTAGCTGCTATCAAAAATTAGCCATAAAAAATTAGCAATCCCTGGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGCTGCTATCAAAAATTAGCCATAAAAAATTAGCAATCCCTGGGA  549

seq1  CCCCAGCCTCAGTTTGAATTTGAAGATAAACCGACCTTGATGAAAAAGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCTCAGTTTGAATTTGAAGATAAACCGACCTTGATGAAAAAGTT  599

seq1  TCTGACACACCAATAGCTGACCACCAAAAGTAAAAAAAAAAAAAAAAAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACACACCAATAGCTGACCACCAAAAGTAAAAAAAAAAAAAAAAAAC  649

seq1  TGTTACTTTGCTAGCTAATAATAATAAAGTTCTGTAGCCTCCCCCCCCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTTTGCTAGCTAATAATAATAAAGTTCTGTAGCCTCCCCCCCCCA  699

seq1  AAAAAAAGAGTATTAAAAAAAAACTGTACTGTTAGCAATCGGGGTTGACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGAGTATTAAAAAAAAACTGTACTGTTAGCAATCGGGGTTGACT  749

seq1  TTCTCTGTGAGGCTGAGCAACCCCATGCACATTGGAACAAAAACCTAGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGAGGCTGAGCAACCCCATGCACATTGGAACAAAAACCTAGTG  799

seq1  CCATTGCAGCAATCTATTGTCAAGCTGTGTTTCTGGGGGTCATGTTCTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCAGCAATCTATTGTCAAGCTGTGTTTCTGGGGGTCATGTTCTCA  849

seq1  ACATCTGGGCCCCTGGGGGTCATAACACCTTCACTCCACAGGTCAAGGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGGGCCCCTGGGGGTCATAACACCTTCACTCCACAGGTCAAGGAA  899

seq1  TCAATGTGAGAATTC  914
      |||||||||||||||
seq2  TCAATGTGAGAATTC  914