BAC Information

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BAC

Clone NameB6Ng01-053M19
Chromosome3 (Build37)
Map Location 106,219,728 - 106,219,834
singlet/doubletsinglet
Overlap genenone
Upstream gene1700095B22Rik, Kcnd3, Ddx20, 6530418L21Rik, Rap1a, EG433637, Adora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819, LOC100043129, Chia, Chi3l3, Chi3l4, EG624696, BC051070
Downstream gene2010016I18Rik, Dennd2d, Cept1, Tmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266, Kcna3, AI504432, Kcna2, Kcna10, Gm131, A630076J17Rik, Prok1, Hbxip, Slc16a4, Rbm15, LOC383901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053M19.bB6Ng01-053M19.g
ACCDH876737DH876738
length762429
definitionDH876737|Mus musculus domesticus DNA, BAC clone: B6Ng01-053M19, 5' end.DH876738|Mus musculus domesticus DNA, BAC clone: B6Ng01-053M19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaaattttagaggaatagatagatctggaggatatcatcat
gattgaggtaacacaatcacaaaaagacacatgtgatatgcacccactga
taagtgaatattagcccagaagctcagaatgcccaagatacaatttgcaa
aacacatgaaactcaagaagaaggaagaccaaaggtggacacatcaatcc
ttagaagggtgaacaaaatacccatggaagaagttacagagacaaagtat
ggagcagagactgaaggagtgaccatccagaaactgcctcacttgaggat
ccattccataaaccaccaccaaacgcagatactattgcagatgccaacaa
gagcttgctgacaggagactggtataactgtctactgagaggctctgcca
gtacctgactgatatagaagtggatgttcacagtcatccattagatagag
gacaaaaccccccattgaagaagctagagaaagtaccctttcagctgcag
gggtttgcagccccataggaggaacaacaatatgaaataaccagtaaccc
cagagctccctgggactaaaccattaatgaaataaaatgcattatgggaa
tcatggctctagctgcataagtagcagtagatggcctagtcggtcatcaa
tgggaggcgaggccctttttactgagaaggttttaagccccagtatagga
aaattcttaggccaggaattagaagagggtggattggtgagcaggaggag
ggggtagaggat
tcacctgaggaatactaaatggctgagtagcacctgaaaaaatgttcagc
atccttaatcatcagggaaatgcaaatcaaaacagccctgagattccatc
tcacaccaatcagaatggctaagatcaaaaattcaggtgacagcagatgc
tggcgaggatgttgagaaagaggaacaccccaccattgctggtgggattg
caagcttgtacaaccactctggaaatcagtctggcgtttcctcagaaaat
tggacatagtaccacaggaggatcccgcaatacctctcctgggcatttag
ttcttaatttgtgttcttttactgtgtctctgtttagtttctacttccat
gatctgtccattgatgagagtggggtgatgaagtctcccactagtattgt
gtgaggtgaaatgtgtgcttttagcttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_106219728_106219834
seq2: B6Ng01-053M19.g_398_504 (reverse)

seq1  TAAAGCTCAAAGCACACATTGCACCTCACACAATAATAGTGGGAGACTTC  50
      ||||||| |||||||||||| |||||||||||||| ||||||||||||||
seq2  TAAAGCTAAAAGCACACATTTCACCTCACACAATACTAGTGGGAGACTTC  50

seq1  AACACACCACTTTCATCAATGGACAGATCATGGAAACAGAAACTAAACAG  100
      | ||| ||||| |||||||||||||||||||||||  |||||||||||||
seq2  ATCACCCCACTCTCATCAATGGACAGATCATGGAAGTAGAAACTAAACAG  100

seq1  GGACACA  107
       ||||||
seq2  AGACACA  107