BAC Information

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BAC

Clone NameB6Ng01-054F21
Chromosome3 (Build37)
Map Location 41,059,224 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054F21.bB6Ng01-054F21.g
ACCDH877127DH877128
length9821,178
definitionDH877127|Mus musculus domesticus DNA, BAC clone: B6Ng01-054F21, 5' end.DH877128|Mus musculus domesticus DNA, BAC clone: B6Ng01-054F21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgaaccccattttttaaatggagttatttgat
tttcttgagttctttatatacattggatattagtcccctatctgatttag
gataggtaaagatcttttcccaatctgtttgtggcctttttggcttattg
acagtgtcttttgccatgcaaaattttgtaatttttgaggtcccatttgt
cgattcttgatcttacagcacaagccactgttgttctatacaggattttt
tccactgtgcccatatcttcgaagttttcccccattttctcctctataat
tttcactgtctctggttttatgttgagttccttgatccacttagatttta
cctaagtacaaggagataagaatggatcaattcgcattcttccacatgtt
aactgccagttgtgccagcaccatttgttgaaaattcggtctttattcca
ctggatggtttttgctcccttgtcaaagatcaagagaccataggtgtgtg
ggttcatttctgggtcttcagttctataccattggtctacttgtcagtct
ctatgccagtaccatgcagtttttatcacaattactctgtagtacagctt
taggtcaggcatgatgattccatcagaggtttgtttatcattgagaagag
tttttgctatcctaggttatttgttattgcagatgaattttcaaattgcc
ctttctaatttattgaagaattgagttggaattttgatggggattgcatt
gaatctgtagattgcttttggcaagatagccatttttactatattgatcc
tgccaatccatgagcatgggagatctttccatcttctgaaatcttcttta
ctttctttcttcagagacttgaagttcttatcatggagatctttcacttc
cttagttagagtcacgccaaggtattttatattatttgtgacaattgaga
aggtgttgtttccctaattctttctcagcctg
gaattcaaactcatgcaggcactatggaaatgagtacagttgtgtaatgg
ctattcctatttttcaccttgactataattggaatgaactacaatccagt
cagtattgaagggctcaactgtgatccagatcttgatgctggaagacaca
agtttctgacctggatcttggcatggagatcttgaggtataatggctatg
aaaagcttaggcttaggcaaggtaatacacacctttaatccaaagagact
aaggatgatgacctctgaattgaagctgggacaaaacaagtcccagatcc
aggcttggtggtacaaacctttaatctgggctatactttctgctggagac
ctacttaaggacattttaagaaggaaacttctctcttcctagctgcttgc
atttacttgcctgcatatctgttggaatctacttcttgtagaagtagctg
aaacaactagcattgtgggactgagcaacaaatagattcctggacttcca
attcagagttgaccattgttggtgagttggactacagactgtaagtattc
ataataaattccctcaatataaaaagacatttcatatgttctgtgactct
agagaaccctgactaatgtaggtagtttctcagaaaaagaaaaaattgtt
gtacctcaagacccagctataccacttttctattatacactcaatggatg
cttcaccctaacacaaggacatctgtttaaccatgttcattactgctgta
ttcacagtagccagatatttaaaacaacctgtttccccctataagaacag
atagaggaaaatgtggttcattcatgtaatggagtattactccaatatta
aaaacatgacaaggtgaaatttgctggcaattgctagaactagaaaaaaa
tcatcttgagtgaggtaaccaagatccatactataatttggtattcatct
gcttatgggtgggtttagtgttaccaatgataccaagtaacacagtaacc
caggagttgagtacagagaaggactaagggaccatgtattcctctgggag
gggaaaaaagatttaaggtggatttgggtcaaagtgggggagacagacag
agatcggaaagtagatgagccaagatctgatttgggattgaaggatgaaa
aaggacatcatccccacgcaaataagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059224_41059737
seq2: B6Ng01-054F21.b_43_542 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  50
      |||||||||||||||| ||||||||| ||||||||||| |||||||||||
seq2  CCACACACCTATGGTCTCTTGATCTTTGACAAGGGAGCAAAAACCATCCA  50

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100
      |||||| |||||| | ||||||||||||||||||||||||||||||  ||
seq2  GTGGAATAAAGACCGAATTTTCAACAAATGGTGCTGGCACAACTGGCAGT  100

seq1  TATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAG  150
      || ||||| |||||||||||||||||||| || |||||||||||||| ||
seq2  TAACATGTGGAAGAATGCGAATTGATCCATTCTTATCTCCTTGTACTTAG  150

seq1  GTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAA  200
      || |||||||||||||||||||||| | ||||||||||||||||| ||||
seq2  GTAAAATCTAAGTGGATCAAGGAACTCAACATAAAACCAGAGACAGTGAA  200

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGG  250
      | |||||||||||||| ||||| ||| | | |||||||||| ||||| ||
seq2  AATTATAGAGGAGAAAATGGGGGAAAACTTCGAAGATATGGGCACAGTGG  250

seq1  AAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATA  300
      ||||| ||||| |||||||| || ||||||||||||||||||  ||||| 
seq2  AAAAAATCCTGTATAGAACAACAGTGGCTTGTGCTGTAAGATCAAGAATC  300

seq1  GACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACAC  350
      ||||||||||||||||  ||| | ||||  || |||| ||||||||||||
seq2  GACAAATGGGACCTCA-AAAATTACAAA-ATTTTGCATGGCAAAAGACAC  348

seq1  CGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCT  399
       ||||||||| |||||||| ||| |||||||||||||| |||||||||||
seq2  TGTCAATAAGCCAAAAAGGCCACAAACAGATTGGGAAAAGATCTTTACCT  398

seq1  ATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAG  449
      |||||||||||||||||||||||||||||||| ||||| |||||||||  
seq2  ATCCTAAATCAGATAGGGGACTAATATCCAATGTATATAAAGAACTCA--  446

seq1  AAGGTGGATTCCAGAAAATCAAATAACCCCA-TTAAAAAATGGGGCTCAG  498
                  ||||||||||||||| ||| ||||||||||||| ||||
seq2  ------------AGAAAATCAAATAACTCCATTTAAAAAATGGGGTTCAG  484

seq1  AGCTAAACAAAGAATT  514
      ||||||||||||||||
seq2  AGCTAAACAAAGAATT  500