BAC Information

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BAC

Clone NameB6Ng01-054G21
Chromosome3 (Build37)
Map Location 41,059,224 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054G21.bB6Ng01-054G21.g
ACCDH877175DH877176
length9461,224
definitionDH877175|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G21, 5' end.DH877176|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcttacctctgagccccattttttaatggggttatttgatt
ttctggagtctaccttcttgattctttatatatattggatattagtcccc
tatcctatttaggataggtaaagatccttttccgacctgttggtggcctt
tttgtctcattgacagtgtctttttccccgcagaaatttgcagtttcctg
aggtcccatttgtcaattctcaaccttacagaactagccattgcttttgt
attcaagaatttttcccctgtgccccatatctttgaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtcgagctcgttgat
ccacttagatttgaccttagtccaaggagataggaatcgatcaattcgca
ttcttctacatgataaccaccagtggtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggtttttgctcccttgtcaaagatcaagtg
accatagatgtgtgggttcatttctgggtcttcaattctattccaatggt
ctacttgtctgttgatataccagtacaatgcagtttttatcacaattgct
ctctagtacagctttaggtcaggcatggtgattccaccacaggttctttt
atccttgagaagggtttttgctatcctaggttttttgttattccagatga
atctggcaattgccctttctaattcattgaagaattgatttggaattttg
atggggattgcactgaatctgtagtttgcttttggcaacatagccatttt
tacaatattgatcctggcaatctatgagcattggagacctttccttcttc
tgagatcttctttaattactttcatcagagacttaaagttcttatcatac
agatctttcaattccttatttagggtcatgcgaaggtatattacat
gaattctttgttcagatctgagccccattttttaatggggttatttgatt
ttatggagtccaccttcttgagttctttatatatattggatattattcac
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttttgatggtgtctttttggtgctggcactacaacgctgagat
tccacctcacaccagtctgaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacacccctccattgttggtg
ggattgcaagcttgtacaccactctggaaatcagtcttgcggttccttca
aaaattggacatagtactaccggaggatccagcaatacctctcccaggca
tatatccagaagatgccccaaccagtaagaaggacacatgctctactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcggctattaaaaagaatgaatttatgaaattcctaggtaaa
tggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaag
gaactcacagagtatgtactcactgataagtggatattagcccaaaactt
agaatacccaagatataagataaaatttgctaaacacatgaaactcaaga
agaatgaagactgaattgtggataccatgcccctccttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggcgctgtgacgaa
aggatggaccatctagagactgccatatccagggatccaccccataatca
tcttccaaatgctgacaccattgcttacactagcaagaaattgctgaaag
gacccagatatagctgtatattgtgagacgatgccgtggtctagcaaaac
agaagtggatgccccacgtcaaattatggatggatccaaggctctcaatg
gagggagcttgagaaagtaccagaagctaaaggatctgccacccttatag
gtggacacacaatgaactactagtatcccggaacttgactggactgctat
tgtacaagatgcctaacgcctctggaaagagcatggaacactcacctcat
gctccctaactgggaagacatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059224_41059737
seq2: B6Ng01-054G21.b_44_557 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  50
      ||||||| |||||||||||||||||| ||||||||||| |||||||||||
seq2  CCACACATCTATGGTCACTTGATCTTTGACAAGGGAGCAAAAACCATCCA  50

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100
      |||||||||||||||||||||||||||||||||||||||| |||||| ||
seq2  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACCACTGGTGGT  100

seq1  TATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAG  150
      ||||||||||||||||||||||||||| | ||||||||||||| ||||||
seq2  TATCATGTAGAAGAATGCGAATTGATCGATTCCTATCTCCTTGGACTAAG  150

seq1  GTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAA  200
      |||||||||||||||||||| || | | ||||||||||||||||||||||
seq2  GTCAAATCTAAGTGGATCAACGAGCTCGACATAAAACCAGAGACACTGAA  200

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATAT-GGTCACAGGG  249
      ||||||||||||||||||||||||||||||  ||||||| || |||||||
seq2  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTCAAAGATATGGGGCACAGGG  250

seq1  GAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAAT  299
      ||||||||| || ||| || |||||||||| || ||||||| ||||||||
seq2  GAAAAATTCTTGAATACAAAAGCAATGGCTAGTTCTGTAAGGTTGAGAAT  300

seq1  AGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACA  349
       |||||||||||||||| |||||||||||  ||||||  || ||||||||
seq2  TGACAAATGGGACCTCAGGAAACTGCAAA-TTTCTGCGGGGAAAAAGACA  349

seq1  CCGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACC  398
      | |||||| ||||||||||| ||||||||| | || ||||||||||||||
seq2  CTGTCAATGAGACAAAAAGGCCACCAACAGGTCGGAAAAGGATCTTTACC  399

seq1  TATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAA  448
      ||||||||||  ||||||||||||||||||||||||||| ||||| ||||
seq2  TATCCTAAATAGGATAGGGGACTAATATCCAATATATATAAAGAA-TCAA  448

seq1  GAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAG  498
      |||||| || ||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTAGACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAG  498

seq1  AGCTAAACAAAGAATT  514
      || ||| |||||||||
seq2  AGGTAAGCAAAGAATT  514