BAC Information

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BAC

Clone NameB6Ng01-054M24
Chromosome3 (Build37)
Map Location 60,359,273 - 60,360,397
singlet/doubletsinglet
Overlap geneMbnl1
Upstream geneEG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1, LOC669823, LOC100040485
Downstream geneLOC676933, LOC100040501, EG666853, P2ry1, Rap2b, LOC666891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054M24.bB6Ng01-054M24.g
ACCDH877454DH877455
length1,2311,107
definitionDH877454|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M24, 5' end.DH877455|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttgaaggtatcaaagatgggaaagaactggctttttttttttt
aatttagcttgctcagatgttacataaacaaggagaagggaagggcaagg
catacccataaacaaatagcaacaaatgagaccagactctcattgtacca
tgcctgagtaaacatatagcatacgtttgaatatacctattgacccatga
cgcctcctgtaccatgtgtgaccatagattcctatgcatcattaggaggc
tgcaggttactctgttgccttgggttgatgaatcctgttcctcctgtttc
ctggtgattctcatttgtatatgatgccctaagattggacctttgtattt
agatggatataaaattcataacagaaataagaactgaaatgaaaatatta
tgcgactcgagccccgggctaccttgccagcagagtcttgcccaacaccc
gcaagggcccacacaggactcaccaggggatcctacgacctctggtgagt
ggaacacagcacctgccccaatccaatcgcgcggaacctgagactgcagt
acatagggaagcaggctacccgggcctgatctggggcacaagccccttcc
actccactccagcaccgggctacctagccagcagagtcgcctgacacccg
caaaagcccacacaggattccacacgggatcctaagacctctagtgagtg
gaacacaacttctgccaggagtctggttcgaacaccagatatctgggtac
ctgccctgcaagaagagagaaagaaagagagcttgcctgcagagaatact
ctgcccactgaaactaaggagagtgctaccctccaggtctgcttatagag
gctaacagagtcacctgaagaacaagctcttaacagtgacaactaaaaca
gctaggttcagagatcaccagatggtgaaaggcaaacgtaagatcctact
aacagaaatcaagaccactcaccatcatcagaacgcagcactcccacccc
acctagtctgggcaccccacacaccgaaatctagacacagatttaaaaac
atttctcatgatgatgatagaggacatcagagactttcataagtcactaa
gaataagggagagccctgctagagttaagtccttaagaaaagcaggaaac
agctaacggttgaaatctaggaaacggaactcgaacggtatggatgacac
tatctgaacttaaggagagtgaacacattag
gaattcctcgtttctgtgtggccattgctagtttctgccccagggccagg
gatgtttgattgatggtgcttctgtaggtggaattatcctgcatgtgtag
aggttttagagtaggacaagaaaacacagatcctaagcaagggggctatt
ttgaggaaaggaaatactagttcgagtgatcacagcctaagaataaccca
tagaagtggattaataagatcacactggttgaaaaggtattaatgtgctg
tgtcctgtttcatttggtgttggtggcaattgttagtaaaggaataccaa
gagcaatactttttaagcacaggtcgagattacagattaagtattgctgt
ttagagagttgggcttattgagcatcttaggacgttgttgaaataagact
gactgcagaaaggaaccaaggttgaatgttgaagaagagattctgctgag
tgtgtattagaggcttagcataggtatggttatttgaaatggagcatata
gctatagagctctgacaactcttgaaacacctaaataacattttttcact
gcttaccatgcaggtatttcaagctgttgcccttacttagcttggtatag
agttaagttttagccaatgtaaggtactggtgttgtcttgattcatagct
gaataaaatacttagtattgaaaaagaacacagaaatcattttagtaact
agagtgactgaaagttcatttctgattactctaaagtagtaatttaatgt
gacatttcactataatatgaaaaaaataaaaaaaagatgctttgttgttt
cttacgcatcctaataactattcagttcctatttttcatagtcataaaat
cacacagttcactcatgtgttatgtcagcaaagtagacactgctttgaaa
atagtagcccttgtaaagtagtgcaggacatgtttgtattatataatgtt
gcttctttttcatatggtggtaagaaaagatcagtaataataccccgaag
ggtttgaatgctgataatagctggaacattgtctttgtactattagaaaa
tcaaaaatatgaagatttaataccgaatacggattataacattgcccctt
ccttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_60359273_60360397
seq2: B6Ng01-054M24.g_68_1174

seq1  GAATTCCTCGTTTCTGTGTGGCCATTGCTAGTTTCTGCCCCAGGGCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCGTTTCTGTGTGGCCATTGCTAGTTTCTGCCCCAGGGCCAGG  50

seq1  GATGTTTGATTGATGGTGCTTCTGTAGGTGGAATTATCCTGCATGTGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTGATTGATGGTGCTTCTGTAGGTGGAATTATCCTGCATGTGTAG  100

seq1  AGGTTTTAGAGTAGGACAAGAAAACACAGATCCTAAGCAAGGGGGCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTAGAGTAGGACAAGAAAACACAGATCCTAAGCAAGGGGGCTATT  150

seq1  TTGAGGAAAGGAAATACTAGTTCGAGTGATCACAGCCTAAGAATAACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAAAGGAAATACTAGTTCGAGTGATCACAGCCTAAGAATAACCCA  200

seq1  TAGAAGTGGATTAATAAGATCACACTGGTTGAAAAGGTATTAATGTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTGGATTAATAAGATCACACTGGTTGAAAAGGTATTAATGTGCTG  250

seq1  TGTCCTGTTTCATTTGGTGTTGGTGGCAATTGTTAGTAAAGGAATACCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGTTTCATTTGGTGTTGGTGGCAATTGTTAGTAAAGGAATACCAA  300

seq1  GAGCAATACTTTTTAAGCACAGGTCGAGATTACAGATTAAGTATTGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATACTTTTTAAGCACAGGTCGAGATTACAGATTAAGTATTGCTGT  350

seq1  TTAGAGAGTTGGGCTTATTGAGCATCTTAGGACGTTGTTGAAATAAGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAGTTGGGCTTATTGAGCATCTTAGGACGTTGTTGAAATAAGACT  400

seq1  GACTGCAGAAAGGAACCAAGGTTGAATGTTGAAGAAGAGATTCTGCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCAGAAAGGAACCAAGGTTGAATGTTGAAGAAGAGATTCTGCTGAG  450

seq1  TGTGTATTAGAGGCTTAGCATAGGTATGGTTATTTGAAATGGAGCATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTAGAGGCTTAGCATAGGTATGGTTATTTGAAATGGAGCATATA  500

seq1  GCTATAGAGCTCTGACAACTCTTGAAACACCTAAATAACATTTTTTCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAGAGCTCTGACAACTCTTGAAACACCTAAATAACATTTTTTCACT  550

seq1  GCTTACCATGCAGGTATTTCAAGCTGTTGCCCTTACTTAGCTTGGTATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACCATGCAGGTATTTCAAGCTGTTGCCCTTACTTAGCTTGGTATAG  600

seq1  AGTTAAGTTTTAGCCAATGTAAGGTACTGGTGTTGTCTTGATTCATAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGTTTTAGCCAATGTAAGGTACTGGTGTTGTCTTGATTCATAGCT  650

seq1  GAATAAAATACTTAGTATTGAAAAAGAACACAGAAATCATTTTAGTAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAATACTTAGTATTGAAAAAGAACACAGAAATCATTTTAGTAACT  700

seq1  AGAGTGACTGAAAGTTCATTTCTGATTACTCTAAAGTAGTAATTTAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGACTGAAAGTTCATTTCTGATTACTCTAAAGTAGTAATTTAATGT  750

seq1  GACATTTCACTATAATATGAAAAAAATAAAAAAAAGATGCTTTGTTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTCACTATAATATGAAAAAAATAAAAAAAAGATGCTTTGTTGTTT  800

seq1  CTTACGCATCCTAATAACTATTCAGTTCCTATTTTTCATAGTCATAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGCATCCTAATAACTATTCAGTTCCTATTTTTCATAGTCATAAAAT  850

seq1  CACACAGTTCACTCATGTGTTATGTCAGCAAAGTAGACACTGCTTTGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGTTCACTCATGTGTTATGTCAGCAAAGTAGACACTGCTTTGAAA  900

seq1  ATAGTAGCCCTTGTAAAGTAGGTGCAGGACATGTTTTGTATTATATTAAT  950
      |||||||||||||||||||| |||||||||||| ||||||||||| ||||
seq2  ATAGTAGCCCTTGTAAAGTA-GTGCAGGACATG-TTTGTATTATA-TAAT  947

seq1  GTTGCTTCTTTTTCAATATGGTGGTAAGAAAAAGGATCAGGTAATAATAA  1000
      |||||||||||||| |||||||||||||||||  ||||| ||||||||| 
seq2  GTTGCTTCTTTTTC-ATATGGTGGTAAGAAAA--GATCA-GTAATAATAC  993

seq1  CCCGAAGGGTTTGAATGCTGATAATTAGGCTTGGAACATTGTCTTTGTTA  1050
      |||||||||||||||||||||||| |||   |||||||||||||||| ||
seq2  CCCGAAGGGTTTGAATGCTGATAA-TAG--CTGGAACATTGTCTTTG-TA  1039

seq1  CTATTAGAAATATTCATAAAAATTATTGAGAATTTAATACACGAATACAG  1100
      ||||||||||     || |||| || |||  ||||||||| ||||||| |
seq2  CTATTAGAAA-----ATCAAAAATA-TGAAGATTTAATAC-CGAATACGG  1082

seq1  TATTTATAACATTTTCC--TCCTTCTC  1125
         ||||||||||  ||  ||||||||
seq2  --ATTATAACATTGCCCCTTCCTTCTC  1107