BAC Information

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BAC

Clone NameB6Ng01-055D14
Chromosome6 (Build37)3 (Build37)
Map Location 130,623,913 - 130,625,08741,059,037 - 41,059,737
singlet/doubletsingletsinglet
Overlap geneEG667798
Upstream geneKlrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793
Downstream geneEG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055D14.bB6Ng01-055D14.g
ACCDH877740DH877741
length1,155978
definitionDH877740|Mus musculus domesticus DNA, BAC clone: B6Ng01-055D14, 5' end.DH877741|Mus musculus domesticus DNA, BAC clone: B6Ng01-055D14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(130,623,913 - 130,625,087)(41,059,037 - 41,059,737)
sequence
gaattctcagaaactaacacatgacacagatgtgtagcactcattggtat
acattcaatgtacaaatgactcacaattctactccatagatacttgctct
accctgcaaatcactgctctattcacacacacacacacacacacacaaac
aaaatgtaatgcaaatgctctaaatatccttgtactgtttgcttgaaatc
caaagtgacaaacagagattgaagtactaaatatattgtcatttgcaata
agtaaaagagggcctttccctttccatcatattttgcaacctcctgtgat
ttgaaaaaatatataaaagagtgagaattctattgtggactatatcaaga
atgcactatgaatatcaacattttcaccagaggagggtttgtaatcttaa
agactcaaccacttccacacccgttggatccacttagatttttggtctga
aacagaagctatgttccttgtaatacaagttattttatgcataaaacaca
cacacatatgtactcaggaaacctaatggttttctctgctcaacacatac
actgttcaaaactgttgtcttagaatttttcaaaagcaatccaatttatt
ttttttccattttttattaggtatttcgctcatttacatttgcaatgcta
taccaaaagtcccccatagccacccaccccctctcccctacccacccact
ccccttttatggccctggcgttcccctgtactggggcatataaagtttgc
gtgtccaatgggcctctctttccagtgatggccgactaggccatcttttg
atattttgaaacataattctgtttgcattagcaatgagacactggaaggt
atgaatgaattcacccagtataaaataaaccctaaatacatcaaggcaat
agtatagcagttctaaagtatttattgataattgaaacaaggagggatga
gagataaaatttactcttaaaagttcaaagactaagaaacagtattcttc
aaagagaatatatctcataaatactaccatctccatattaactataaaca
tttgcatttgtgtattgcatagttaccacattatcttgttaaaacttaca
cttagaaacactgttattcatgaatttaaaaacgaattcctacaaggaat
atcaa
gaattctttgttcatctttgagccccattttttaatggggttatttgatt
ttctggagctcaccttcttgaattctttatatatattggatattagtccc
ctgtctgatttggaataggtaaagattcttttccaatctgtaggtggtct
ttctgtcttattgacggtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttatcgatcctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcacctgtacccatatcatcgaggcttttccctac
tttctcctctataagtatcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaattctc
attcttctacatgataactgccatttgtgcaccatttgttgaaaatgctg
tcttccccaccccccccccccacgggatggttttagctcccttgtcaaag
atcaagtgaccataggtgtgtgggttcatctctgggtcttcaattctgtt
ccattggtctacttgtctgtcactataccggtaccatgcagtttttatca
caattgctctgtagtgcagctttagttcaggcatggtgattccaccagag
gttcttttatccttgataagagtttttgctatcctatgttttttgttatt
ccagatgaatctgccgattgccctttctaattcgtgctgtattgacagca
tttatcatgtctcatggctgaatattgtgtataatcattcctattgtatt
ttacctgttttgcttataattcatgcttcatttggtcatttctcttccta
ttctttccaccgtaaatctggaagattctgtttcccccaaataatatctc
aggctcaataaagttgttgacttttgaagatgtaccctttgccatatgag
tctgtgatttccctcctgcttattttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130623913_130625087
seq2: B6Ng01-055D14.b_47_1201

seq1  GAATTCTCAGAAACTAACACATGACACAGATGTGTAGCACTCATTGGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAAACTAACACATGACACAGATGTGTAGCACTCATTGGTAT  50

seq1  ACATTCAATGTACAAATGACTCACAATTCTACTCCATAGATACTTGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAATGTACAAATGACTCACAATTCTACTCCATAGATACTTGCTCT  100

seq1  ACCCTGCAAATCACTGCTCTATTCACACACACACACACACACACACAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCAAATCACTGCTCTATTCACACACACACACACACACACACAAAC  150

seq1  AAAATGTAATGCAAATGCTCTAAATATCCTTGTACTGTTTGCTTGAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTAATGCAAATGCTCTAAATATCCTTGTACTGTTTGCTTGAAATC  200

seq1  CAAAGTGACAAACAGAGATTGAAGTACTAAATATATTGTCATTTGCAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGACAAACAGAGATTGAAGTACTAAATATATTGTCATTTGCAATA  250

seq1  AGTAAAAGAGGGCCTTTCCCTTTCCATCATATTTTGCAACCTCCTGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAGAGGGCCTTTCCCTTTCCATCATATTTTGCAACCTCCTGTGAT  300

seq1  TTGAAAAAATATATAAAAGAGTGAGAATTCTATTGTGGACTATATCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAATATATAAAAGAGTGAGAATTCTATTGTGGACTATATCAAGA  350

seq1  ATGCACTATGAATATCAACATTTTCACCAGAGGAGGGTTTGTAATCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTATGAATATCAACATTTTCACCAGAGGAGGGTTTGTAATCTTAA  400

seq1  AGACTCAACCACTTCCACACCCGTTGGATCCACTTAGATTTTTGGTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAACCACTTCCACACCCGTTGGATCCACTTAGATTTTTGGTCTGA  450

seq1  AACAGAAGCTATGTTCCTTGTAATACAAGTTATTTTATGCATAAAACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGCTATGTTCCTTGTAATACAAGTTATTTTATGCATAAAACACA  500

seq1  CACACATATGTACTCAGGAAACCTAATGGTTTTCTCTGCTCAACACATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATGTACTCAGGAAACCTAATGGTTTTCTCTGCTCAACACATAC  550

seq1  ACTGTTCAAAACTGTTGTCTTAGAATTTTTCAAAAGCAATCCAATTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCAAAACTGTTGTCTTAGAATTTTTCAAAAGCAATCCAATTTATT  600

seq1  TTTTTTCCATTTTTTATTAGGTATTTCGCTCATTTACATTTGCAATGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCATTTTTTATTAGGTATTTCGCTCATTTACATTTGCAATGCTA  650

seq1  TACCAAAAGTCCCCCATAGCCACCCACCCCCTCTCCCCTACCCACCCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAAGTCCCCCATAGCCACCCACCCCCTCTCCCCTACCCACCCACT  700

seq1  CCCCTTTTATGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTATGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGC  750

seq1  GTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTG  800

seq1  ATATTTTGAAACATAATTCTGTTTGCATTAGCAATGAGACACTGGAAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGAAACATAATTCTGTTTGCATTAGCAATGAGACACTGGAAGGT  850

seq1  ATGAATGAAATCACCCAGTATAAAATAAACCCTAAATACACCAAGGCAAT  900
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  ATGAATGAATTCACCCAGTATAAAATAAACCCTAAATACATCAAGGCAAT  900

seq1  AGTAATAGACAGTTCTAAAGTATTTATTGATAATTGAAACAAGGAGGGAT  950
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGT-ATAG-CAGTTCTAAAGTATTTATTGATAATTGAAACAAGGAGGGAT  948

seq1  GAGAGATTAAAATTTACTCTTTAAAAAGTTCAAAGACTAAGAACACAGTA  1000
      |||||| ||||||||||||||  |||||||||||||||||||| ||||||
seq2  GAGAGA-TAAAATTTACTCTT--AAAAGTTCAAAGACTAAGAA-ACAGTA  994

seq1  ATCTTCAAAGAGAATATATCTCATAAATACTAACAATCTCCCATATTAAC  1050
       |||||||||||||||||||||||||||||| || |||| ||||||||||
seq2  TTCTTCAAAGAGAATATATCTCATAAATACT-ACCATCT-CCATATTAAC  1042

seq1  TATAAACATATGCATCTTGTTTGTATTTGCATAGTTACTACAATTATTCT  1100
      ||||||||| ||||| |||  |||| |||||||||||| || |||| |||
seq2  TATAAACATTTGCAT-TTG--TGTA-TTGCATAGTTACCAC-ATTA-TCT  1086

seq1  TGTTAAAAACCTTACACTTTAGAACACTGTTTATTCAATGATTTAAAAAA  1150
      ||||||||  |||||||||   ||||||| |||||| |||| || |||||
seq2  TGTTAAAA--CTTACACTTAGAAACACTG-TTATTC-ATGAATTTAAAAA  1132

seq1  TGAATTCTATACAATGAATAATCAA  1175
       ||||||  ||||| |||| |||||
seq2  CGAATTC-CTACAAGGAAT-ATCAA  1155

seq1: chr3_41059037_41059737
seq2: B6Ng01-055D14.g_69_777 (reverse)

seq1  ATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAGG  50
      ||||||||||||||||||||||| ||||||||||||||||||| ||||||
seq2  ATTCATCTGGAATAACAAAAAACATAGGATAGCAAAAACTCTTATCAAGG  50

seq1  ATAACAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTAC  100
      |||| ||||||||||||||||||||||||||||| ||||||||  |||||
seq2  ATAAAAGAACCTCTGGTGGAATCACCATGCCTGAACTAAAGCTGCACTAC  100

seq1  AGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGACAGACAAGC  150
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  AGAGCAATTGTGATAAAAACTGCATGGTACCGGTATAGTGACAGACAAGT  150

seq1  AGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCACACACCTATG  200
      |||||||||||| |||||||||||| |||| | ||| |||||||||||||
seq2  AGACCAATGGAACAGAATTGAAGACCCAGAGATGAACCCACACACCTATG  200

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGG---------  241
      ||||||||||||| |||||||||||||||||||||| ||||         
seq2  GTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCCGTGGGGGGGGGGG  250

seq1  --AAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTA  289
            ||||||||||||||||||||||||    |||||| |||  ||||
seq2  GTGGGGAAGACAGCATTTTCAACAAATGGT----GCACAAATGGCAGTTA  296

seq1  TCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGT  339
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  TCATGTAGAAGAATGAGAATTGATCCATTCCTATCTCCTTGTACTAAGGT  346

seq1  CAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAAC  389
      ||||||||||||||| ||||||| ||||||||||||||||||||||| ||
seq2  CAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTGATAC  396

seq1  TTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAA  439
      |||||||||||||||| ||||||||||| || |||||||  ||||| |||
seq2  TTATAGAGGAGAAAGTAGGGAAAAGCCTCGATGATATGGGTACAGGTGAA  446

seq1  AAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGA  489
      ||||||||| |||||||||||||||||||||||||||||| ||| || ||
seq2  AAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGGATCGA  496

seq1  CAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCG  539
       |||||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  TAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAAGGCAAAAGACACCG  546

seq1  TCAATAAGACAAAAAG-GCACCAACAGATTGGGAAAGGATCTTTACCTAT  588
      ||||||||||| ||||  |||| ||||||||| |||| ||||||||||||
seq2  TCAATAAGACAGAAAGACCACCTACAGATTGGAAAAGAATCTTTACCTAT  596

seq1  CCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAGAA  638
       | |||||||| |||||||||||||||||||||||| ||||| |||||||
seq2  TCCAAATCAGACAGGGGACTAATATCCAATATATATAAAGAATTCAAGAA  646

seq1  GGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGC  688
      ||||   ||||||||||||||||||||||||||||||||||||||| || 
seq2  GGTGAGCTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAAAGA  696

seq1  TAAACAAAGAATT  701
      | |||||||||||
seq2  TGAACAAAGAATT  709