BAC Information

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BAC

Clone NameB6Ng01-055M22
Chromosome3 (Build37)
Map Location 136,605,958 - 136,606,958
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039350, LOC383923, Bank1, LOC100039477, LOC668868, Ppp3ca
Downstream geneLOC668870, LOC100039447, Emcn, EG229862, Ddit4l, LOC668874, H2afz, Dnajb14, Map2k1ip1, Dapp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055M22.bB6Ng01-055M22.g
ACCDH878153DH878154
length9881,244
definitionDH878153|Mus musculus domesticus DNA, BAC clone: B6Ng01-055M22, 5' end.DH878154|Mus musculus domesticus DNA, BAC clone: B6Ng01-055M22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattacaacaactggtgatccactgacaacagaagagacagcttg
gctctctatctggtaactctctccaaaatgaaaaatcaaatggattggac
atttcatttttaaacataaaatataaaaacaaggagattgctagaaaaca
acaacaacaacaacaacaacaaaacctgaaataatgtttgtggccttgac
taggcacagagtttgacataaaatcaaaagccagaactgaaaattacaaa
ttaacaggattttattaaaagtatgtttcctcttgcttcatagagtgctg
tagtctggaagaaaactggtggcagattgtacctctatcagagaacttgg
agcgcaaatcttcctaaactcaataacaaacaaaatttaaatgcataaga
gatttgggggcgtgggggacagcaaataagatatgcacaaaaataaatgt
ccacattaaaagctgttcaatatcatggtgactggaaaaacagaaagcaa
tggagattgttgtggtctgaatataaaatgtcccatacaaggtcttgtgc
ttggacacttggtctccagttggtagcaaggttatagaacattttggaaa
tggagtcttgctggaggatgtgtatcactgggtgagatgggacttgaggt
tttttagcctggatccacttccctccttccctccttccctcctttcctcc
ctccctacttccctccttccctcctttcctccctccctccctcttcttct
cactccctcccttcgtcttccctttctgtacaccgtccttccctcatacc
tctcttccttatgtaggaaatgactatgacctctgcttcctgaatgagaa
gttggcccatgtacttgttgtcatactatcttgtaatgacaacaatttac
tctctggaactatagcaaaagaaccacttctctcactaagtactttctgc
agggattctgctcaccaacaaactgtggccatacaatg
gaattcctactgaattccaagctcctcatcttcaaggattttctaggaca
ttggaacactgacataggcttacctatgtcagaattcaatctttaaaggc
acttataataaaacaatactgaaagagagcatgtggatccatacaccaga
ctaatgaggagacagggtatgagtatatgggttatgagaatgccaaggtt
ccaggaggttgagtttccttgaaactctttgcctcgtgagtgcttccagg
cctctcggcctgtcaagcagacttcactggagtggacatagcaaccaaac
attattctagatagagaaaggctgaaaatatttccttaaaaacaagaaca
gatacaggagtaaatgtgacaaaggtgtctactttctcaagtttacttca
atataacactcaaagccttaggagataaataaggcaagagaaagtaataa
aattggtagaaatatgaaaaaactcactgtcactatttgaaaattatata
gacatatctgtaaaagaccacttaagattcctcaaaaaaaaaaaatctct
gaaaaaagaagaatcaggagagagtcttctgtcttccaatgtccttatgt
aggtctccagcaggaggtgtggcccaaattaacgatgtataccaccatac
ctggatctgggacttgttttgtcccagatgaccttgaactcagagatctc
cttgccttactcttctgggattcatagcccctatgcctcaagatctctat
accaagatccacatcagaaacttgtatctcccagtctcaagatcaggatc
acaggtgagccttccattctggattgtagttcattccagatagtcaagct
gacaaccagaaatagccactacacatatcataatcatcttactggagaat
aatattgctcacagtaggatgggccaaactcctgtgtcataacattacga
ccatccccacagaaatgtccacaagccattagatctaggaaatttctcac
tgagtcactggaggtgattctagttgtgtaaagttaagaattaaacccta
ccagacaacattataagtaaggcacaagctaccgcaagatttttttaact
agaatacaattataaacgcttaacatattctgtaagcccttccatttctt
tggaagtccggaacctttgttaagcatatcatgtgtgtcagcaataatgg
tgacgagtgtgtggaagatataacccttaagatagcatataacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_136605958_136606958
seq2: B6Ng01-055M22.b_48_1035

seq1  GAATTCATTACAACAACTGGTGATCCACTGACAACAGAAGAGACAGCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACAACAACTGGTGATCCACTGACAACAGAAGAGACAGCTTG  50

seq1  GCTCTCTATCTGGTAACTCTCTCCAAAATGAAAAATCAAATGGATTGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTATCTGGTAACTCTCTCCAAAATGAAAAATCAAATGGATTGGAC  100

seq1  ATTTCATTTTTAAACATAAAATATAAAAACAAGGAGATTGCTAGAAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTTTAAACATAAAATATAAAAACAAGGAGATTGCTAGAAAACA  150

seq1  ACAACAACAACAACAACAACAAAACCTGAAATAATGTTTGTGGCCTTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAACAACAACAACAAAACCTGAAATAATGTTTGTGGCCTTGAC  200

seq1  TAGGCACAGAGTTTGACATAAAATCAAAAGCCAGAACTGAAAATTACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCACAGAGTTTGACATAAAATCAAAAGCCAGAACTGAAAATTACAAA  250

seq1  TTAACAGGATTTTATTAAAAGTATGTTTCCTCTTGCTTCATAGAGTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGGATTTTATTAAAAGTATGTTTCCTCTTGCTTCATAGAGTGCTG  300

seq1  TAGTCTGGAAGAAAACTGGTGGCAGATTGTACCTCTATCAGAGAACTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGGAAGAAAACTGGTGGCAGATTGTACCTCTATCAGAGAACTTGG  350

seq1  AGCGCAAATCTTCCTAAACTCAATAACAAACAAAATTTAAATGCATAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCAAATCTTCCTAAACTCAATAACAAACAAAATTTAAATGCATAAGA  400

seq1  GATTTGGGGGCGTGGGGGACAGCAAATAAGATATGCACAAAAATAAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGGGGCGTGGGGGACAGCAAATAAGATATGCACAAAAATAAATGT  450

seq1  CCACATTAAAAGCTGTTCAATATCATGGTGACTGGAAAAACAGAAAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTAAAAGCTGTTCAATATCATGGTGACTGGAAAAACAGAAAGCAA  500

seq1  TGGAGATTGTTGTGGTCTGAATATAAAATGTCCCATACAAGGTCTTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATTGTTGTGGTCTGAATATAAAATGTCCCATACAAGGTCTTGTGC  550

seq1  TTGGACACTTGGTCTCCAGTTGGTAGCAAGGTTATAGAACATTTTGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACACTTGGTCTCCAGTTGGTAGCAAGGTTATAGAACATTTTGGAAA  600

seq1  TGGAGTCTTGCTGGAGGATGTGTATCACTGGGTGAGATGGGACTTGAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTTGCTGGAGGATGTGTATCACTGGGTGAGATGGGACTTGAGGT  650

seq1  TTTTTAGCCTGGATCCACTTCCCTCCTTCCCTCCTTCCCTCCTTTCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGCCTGGATCCACTTCCCTCCTTCCCTCCTTCCCTCCTTTCCTCC  700

seq1  CTCCCTCCTTCCCTCCTTCCCTCCTTTCCTCCCTCCCTCCCTCTTCTTCT  750
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTACTTCCCTCCTTCCCTCCTTTCCTCCCTCCCTCCCTCTTCTTCT  750

seq1  CTCTCCCTCCCTTCCTCTTTCCTTTCTTTTCTCCCTCCTTCCCTCCTTCC  800
      | |||||||||||| |||| ||||||| | | || ||||||||| | | |
seq2  CACTCCCTCCCTTCGTCTTCCCTTTCTGTACACCGTCCTTCCCT-CATAC  799

seq1  CTCTCTTCCTTATGTAGGCAAATGACATATGACCTCTGCTTCCTGATTGA  850
      |||||||||||||||||| ||||||| ||||||||||||||||||| |||
seq2  CTCTCTTCCTTATGTAGG-AAATGAC-TATGACCTCTGCTTCCTGAATGA  847

seq1  GAAGTTGGCCCATGTTCCTGTTGTCATACCTTCCTTGTAATGACCAACAG  900
      ||||||||||||||| | |||||||||| ||  |||||||||| ||||| 
seq2  GAAGTTGGCCCATGTACTTGTTGTCATA-CTATCTTGTAATGA-CAACAA  895

seq1  TTTTCCCTCTGGAACTATAAGCCAAAAGAACC-CCTCTCTCACCTAAGTT  949
      ||| | |||||||||||||   |||||||||| | ||||||| ||||| |
seq2  TTTACTCTCTGGAACTATA--GCAAAAGAACCACTTCTCTCA-CTAAG-T  941

seq1  CCTTTCTGTCAAGGCATTCTGTCTCAGCAACAGAAATGTGGCCCATACAA  999
       |||||||   ||| |||||| |||| ||||| || ||||| ||||||||
seq2  ACTTTCTG--CAGGGATTCTG-CTCACCAACA-AACTGTGG-CCATACAA  986

seq1  TG  1001
      ||
seq2  TG  988