BAC Information

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BAC

Clone NameB6Ng01-056D10
Chromosome3 (Build37)
Map Location 41,059,142 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056D10.bB6Ng01-056D10.g
ACCDH878444DH878445
length1,0291,093
definitionDH878444|Mus musculus domesticus DNA, BAC clone: B6Ng01-056D10, 5' end.DH878445|Mus musculus domesticus DNA, BAC clone: B6Ng01-056D10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtctagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtcgc
ctacctgatttaggataggtaaagatgctttccctatctgctggtggcct
ttttgtcttattgacggtgtcttttgctttacagaagctttgtaatttta
tgaggtcccatttgtcgattctcaatcttacagcacaagccattgctgtt
ttattcaggaatttttcccctgtgcccatatcttcggggctttttcccac
attctcctctataagtttcagtgtctctggttttatgtggagttccttga
tccacatagatttgaccttagtaaaaggataaaggaatggattaattcac
attcttcgacataataactgtcagttgtgccatcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagattaagt
gaccataggtctgttctttcatttctgggtcttcaattctattccattgg
tctacttgtctgttgctataccagtaccatgcggtttttatcacaattgc
tttgtagtaaagctttaggtaaggcatggtgatttcaccagaggttcttt
tatccttgagaagaatttttgctatcctagatttttttgttattccagat
gaatttgcagattgctctttttaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatttgtagaaagcttttgacatgataaccatt
tttactatattgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttcttgaatttctttcttcagagacttgaagttcttatcat
acagatctttcacgtccttagttagagtcatgccaaggtattttatatta
tttgtgactattaagaaggtgttgtttcctaatttctttctcatctgtta
tcctttgtgtaagaaaggcattgacttgt
gaattcagattctcattcaatgttgatgaaggagagtcccggcacagtag
tgcacttgctatcttgcttttggtgtcctaaaagcccagataaccaacta
gaatgatgattggtttattttggctcatagtttttgagaacttagcccac
tgatcaattggtatcattgcctttatacgtgaggcaaaatagcactttgt
ggtaggaccatgtggtatatagcaaatctgctcatttcatggacagaatc
aaaaagaaagaggtgaggatggagggaaacatgaaaaatgatggagacga
aaaggaggaagcaggggaagagcagagaaaggaggaagagaaggaggaaa
atgatagcctgaattttagtgcttccttcaaaggtatccatttgaaggcc
tgccatccagaactctcttagatgctacttcttttttttttcttttattg
gatattttatttgtttcattttaaatgtattccctttcccagtgtcttgc
cacgcccccttacctatttctatgaggtgcccccacctacccacccgctc
ccatctcactgccctagcatttctctacactggagcattaagccttcaca
ggaccaagggtctcccctccaattgatgacagataaggctccttcagcta
ctttagtccttccccaactcctttttggggttcctgtgctcagaccaatg
gttgtctgtgagcatctgcttctgtattggtcaggctctggcagagcctc
tcaggagacagccgtatctggctccagtcagcaagcacttcttgacatta
gccatagtgtctgatttggtgtctgcatgtgggatgggtccccagtttgg
acagtctctggatggccttttcttttcaatctctgttccacgatttgtcc
tgtatttccttagacaggaacattctggtttaaaatttcaagattggtgg
gtggctcatccatcatgggggggggggtgcatgcttatcctctggaattg
gtctcaacaggttctccttccccctttagggaaatttcagctatgtgcat
ccctatggggtctggggaggatcttggaaaggcccaatagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059142_41059737
seq2: B6Ng01-056D10.b_45_641 (reverse)

seq1  AATTGTGATAAAAACTGCATGGTACTGGTATAGTGACAGACAAGCAGACC  50
      ||||||||||||||| |||||||||||||||||  ||||||||| |||||
seq2  AATTGTGATAAAAACCGCATGGTACTGGTATAGCAACAGACAAGTAGACC  50

seq1  AATGGAATAGAATTGAAGACTCAGAAACGAATCCACACACCTATGGTCAC  100
      |||||||||||||||||||| |||||| |||   ||| ||||||||||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAAAGAACAGACCTATGGTCAC  100

seq1  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCAT  150
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCAT  150

seq1  TTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGC  200
      ||||||||||||||| |||||||||||   ||||| |||| |||||||| 
seq2  TTTCAACAAATGGTGATGGCACAACTGACAGTTATTATGTCGAAGAATGT  200

seq1  GAATTGATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  250
      ||||| ||||| |||| | ||||| ||||||||||||||||| |||||||
seq2  GAATTAATCCATTCCTTTATCCTTTTACTAAGGTCAAATCTATGTGGATC  250

seq1  AAGGAACGCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  300
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAATGT  300

seq1  GGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAA  350
      ||| |||||||  |||||||||| ||||||||||||||||||| ||| ||
seq2  GGGAAAAAGCCCCGAAGATATGGGCACAGGGGAAAAATTCCTGAATAAAA  350

seq1  CAGCAATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATG  400
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  CAGCAATGGCTTGTGCTGTAAGATTGAGAATCGACAAATGGGACCTCATA  400

seq1  AAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  450
      ||| | ||||||||||| || |||||||||||||||||||||||||||||
seq2  AAATTACAAAGCTTCTGTAAAGCAAAAGACACCGTCAATAAGACAAAAAG  450

seq1  G-CACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  499
      | ||||| ||||| ||||||| |||||||||||||||||||||| |||| 
seq2  GCCACCAGCAGATAGGGAAAGCATCTTTACCTATCCTAAATCAGGTAGGC  500

seq1  GACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAA  549
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  GACTAATATCCAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAA  550

seq1  TCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  596
      |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAGACAAAGAATT  597