BAC Information

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BAC

Clone NameB6Ng01-057F13
Chromosome14 (Build37)3 (Build37)
Map Location 83,131,954 - 83,132,54641,058,778 - 41,059,337
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057F13.bB6Ng01-057F13.g
ACCDH879242DH879243
length587950
definitionDH879242|Mus musculus domesticus DNA, BAC clone: B6Ng01-057F13, 5' end.DH879243|Mus musculus domesticus DNA, BAC clone: B6Ng01-057F13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(83,131,954 - 83,132,546)(41,058,778 - 41,059,337)
sequence
agcatcaggcatgggaaagataataactttcagtggtaaggtgtttccaa
atgggaatttggcaggccaataagtgaggttacagaagaagaacataacc
ataacaagttggtttataacttccagaaacaaagacatgattgcaaggtg
gtaataataaggttgtcataacaaggtgatcatcacaatcatttgaaaca
aaggcatggacgtcctttcctgcaacagggaatacagaaccatttaaagt
taaggttacagataaggcacaggccagtgcctgaggaagatgtttaatca
catacaggaatgaccctagtttgtctgtactataagatggcttcgaagcc
ctaggtggaggctggctggtttatgaacactgaagcgactgacctctttc
ctctagtctccactgtgctttctctagatctcacccctccttcagtaccc
aacctacagtttgtttttcctgcatttactttaatctctccttctggttg
aaatataagtatgagattaaggtaagaactattaataattagcattattt
taaaaagtattaccatttgttgaagtgtgtgtgtgtt
gaattctttgtttagctccgagccccattttttaatggagtgatttgatt
ttctggagtccaccttgagttctttatatatatatatatatattagatat
tagtcccctatctgatttaggattggtaaagatcctttcccaatctgttg
gtggcctttttgtcttattgacagtgtcttttgccttacagaagctttgc
aattttatgaggtcccatttgttgattctcaatcttacagaacaagccat
tgcggttctatttaggaatttttcccctgtgctcatatcttcaaggcttt
tccccactttctcctatataagtttcactgtctctggttttatgtggagt
tccttgatccttagtacaaggagataggactggatcaattcacaatcttc
tacatgttaaccaccagttgtatgagcaccatttgttgaaaatggtgttg
tttttccactggatgcttttagctcccttgtcaaagatcaagtgaccata
ggtgtgtgggttcatttctggttcttcagttctattccatttgtctcctt
gtctgttgctataccagtaccatgcaatttttatcactattgctctgtag
tacagcattaggtcaggcatggtgattccataagaggttcttttatcctt
gaggagagtttttgttatcctaggttttttgttatttcacatgaatttgc
agattcccctttccaaatcgttgaagaattgagttggaattttgatgggg
attgcattgaatctgtagattgcttttggcaagatagccatttttactat
attgatcctgcccatccatgagcatggaagatcttttcatcctctgagat
cttctttaatttctttttcagatacttgaagttttatcatacagatcttt
catttctttgttagagtcacacaagatattttatatatttgtgactattg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83131954_83132546
seq2: B6Ng01-057F13.b_44_636

seq1  GAATTCAGCATCAGGCATGGGAAAGATAATAACTTTCAGTGGTAAGGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATCAGGCATGGGAAAGATAATAACTTTCAGTGGTAAGGTGT  50

seq1  TTCCAAATGGGAATTTGGCAGGCCAATAAGTGAGGTTACAGAAGAAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATGGGAATTTGGCAGGCCAATAAGTGAGGTTACAGAAGAAGAAC  100

seq1  ATAACCATAACAAGTTGGTTTATAACTTCCAGAAACAAAGACATGATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCATAACAAGTTGGTTTATAACTTCCAGAAACAAAGACATGATTGC  150

seq1  AAGGTGGTAATAATAAGGTTGTCATAACAAGGTGATCATCACAATCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGTAATAATAAGGTTGTCATAACAAGGTGATCATCACAATCATTT  200

seq1  GAAACAAAGGCATGGACGTCCTTTCCTGCAACAGGGAATACAGAACCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAGGCATGGACGTCCTTTCCTGCAACAGGGAATACAGAACCATT  250

seq1  TAAAGTTAAGGTTACAGATAAGGCACAGGCCAGTGCCTGAGGAAGATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTAAGGTTACAGATAAGGCACAGGCCAGTGCCTGAGGAAGATGTT  300

seq1  TAATCACATACAGGAATGACCCTAGTTTGTCTGTACTATAAGATGGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACATACAGGAATGACCCTAGTTTGTCTGTACTATAAGATGGCTTC  350

seq1  GAAGCCCTAGGTGGAGGCTGGCTGGTTTATGAACACTGAAGCGACTGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCTAGGTGGAGGCTGGCTGGTTTATGAACACTGAAGCGACTGACC  400

seq1  TCTTTCCTCTAGTCTCCACTGTGCTTTCTCTAGATCTCACCCCTCCTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTCTAGTCTCCACTGTGCTTTCTCTAGATCTCACCCCTCCTTCA  450

seq1  GTACCCAACCTACAGTTTGTTTTTCCTGCATTTACTTTAATCTCTCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAACCTACAGTTTGTTTTTCCTGCATTTACTTTAATCTCTCCTTC  500

seq1  TGGTTGAAATATAAGTATGAGATTAAGGTAAGAACTATTAATAATTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGAAATATAAGTATGAGATTAAGGTAAGAACTATTAATAATTAGCA  550

seq1  TTATTTTAAAAAGTATTACCATTTGTTGAAGTGTGTGTGTGTT  593
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAAAAAGTATTACCATTTGTTGAAGTGTGTGTGTGTT  593

seq1: chr3_41058778_41059337
seq2: B6Ng01-057F13.g_464_1018 (reverse)

seq1  CAATAGTCACAAATAATATAAAATATCTTGGCATGACTCTAACTAAGGAA  50
      |||||||||||||| |||||||||||||| |  |||||||||| || |||
seq2  CAATAGTCACAAAT-ATATAAAATATCTT-GTGTGACTCTAAC-AAAGAA  47

seq1  GTGAAAGATCTGTATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTAA  100
       |||||||||||||||| || |||||||||| |||||| |||||||||||
seq2  ATGAAAGATCTGTATGATAA-AACTTCAAGTATCTGAA-AAAGAAATTAA  95

seq1  AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGA  150
      ||||||||||||| |||| |||||||| |||||||||||||| |||||||
seq2  AGAAGATCTCAGAGGATGAAAAGATCTTCCATGCTCATGGATGGGCAGGA  145

seq1  TCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAAT  200
      |||| || ||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATAGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAAT  195

seq1  GCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTTGAAAGAGC  250
      |||||||||||||||||||||||||||||||||||||| || ||||| | 
seq2  GCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGATTTGGAAAGGGG  245

seq1  AATCTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTC  300
      ||||||||||||||| || ||||||||||||||||||||| |||||||||
seq2  AATCTGCAAATTCATGTGAAATAACAAAAAACCTAGGATAACAAAAACTC  295

seq1  TTCTCAAGGATAACAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAG  350
      | ||||||||||| |||||||||  ||||||||||||||||||||||| |
seq2  TCCTCAAGGATAAAAGAACCTCTTATGGAATCACCATGCCTGACCTAATG  345

seq1  CTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGA  400
      || |||||||||||||| |||||||||| ||||||||||||||||||  |
seq2  CTGTACTACAGAGCAATAGTGATAAAAATTGCATGGTACTGGTATAGCAA  395

seq1  CAGACAAGCAGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCAC  450
      |||||||| |||| |||||||||||| ||||||  |||||| ||| ||||
seq2  CAGACAAGGAGACAAATGGAATAGAACTGAAGAACCAGAAATGAACCCAC  445

seq1  ACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGG  500
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  ACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAAGCATCCAGTGG  495

seq1  AAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATC  550
      |||||  ||| ||||||||||||||||||||   ||||||||| |||| |
seq2  AAAAACAACACCATTTTCAACAAATGGTGCTCATACAACTGGTGGTTAAC  545

seq1  ATGTAGAAGA  560
      ||||||||||
seq2  ATGTAGAAGA  555