BAC Information

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BAC

Clone NameB6Ng01-057P03
Chromosome3 (Build37)
Map Location 144,848,761 - 145,001,164
singlet/doubletdoublet
Overlap geneCol24a1
Upstream geneLmo4, LOC545572, Hs2st1, Sep15, LOC435761, Sh3glb1, LOC668890, Clca1, Clca2, Clca4, EG622139, AI747448, Clca6, Clca3, Clca5, Odf2l
Downstream gene2410019A14Rik, Cyr61, Ddah1, LOC100040331, Bcl10, 2410004B18Rik, Syde2, Wdr63, Mcoln3, Mcoln2, Edg7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057P03.bB6Ng01-057P03.g
ACCDH879658DH879659
length1,0311,131
definitionDH879658|Mus musculus domesticus DNA, BAC clone: B6Ng01-057P03, 5' end.DH879659|Mus musculus domesticus DNA, BAC clone: B6Ng01-057P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,848,761 - 144,849,678)(145,000,014 - 145,001,164)
sequence
gaattctttttatttctgttccaaatgaaattgaaaatgccttggtctag
ttctagaagaaaaacttaaaggtttattatgaattaaaatcatgctaact
ttataatatgaaaacagaaccatcatctatatgatgttgagccttctcat
caaaactatacttccatatgcccactaatccttccttcatcttttagaat
gttttgattttctttttgtaatataatttattataattgttatattggac
atggtcaatagagcctatgctcttcatttagaataggatgtgatctccca
ttatattttcaacattagtaattgtatgtagggagttttgtgtatcaatt
ctgtatctttctagcttgctgtagtttttgtttgtagtattatagcctga
tctctttgagttttctagataactcaacatgttctggatatattggtagc
cttactactctgttaatttttacatttctagtcttttttatcttgtataa
tttcactgtctaatactttctggtacaatgttaaactataatgataatag
gaacttttaagactcgtctctgaatagggatgctttcatgtttattccta
aaatatgatactgatttgggaactaaaataaatgtagcataagaacaacc
agtcttccaagatcttgcagggttcctttattaatgctttcccctgtggt
tttggctaaggaaaatgggaaaaggtgacaagaactctttgatgattttt
tttcttctatgtaaattgtgtgtatgcacatgtgtgcatatataaaacaa
gtactatattttgtctgtcctggaaattgaacctagggcctagaacatgc
tggagtcagttttagtagtccctcgaaagaaatattccattttgtagaat
ctttcgccaatctgtattttgtattttgtctatcattctaattttttagc
aactcttcatcttttcctggatgaggtggctagcattcacctgcttactg
acttccgaggaaaacttccatttatgctttc
gaattctaaagttgaaggtcagcggtgcgcatagatatgtatattttctt
ggagagggcctgtagtcattacagaatgctcgaagagacttgtgaatcag
aggtttaagacccactgttctgaacacagcaggaaaagagaaagcaagaa
gactaaaacgttgctagttcataattttgctgataatctatagctagtcg
attaaaagctgttctttttgctctatataaaatgagaataactcggagga
aacatggcagtggcgagagaggaattatctccccggcgagatgctttatg
cccaccttagcgaccagagaatgccagaaagcacttacgtgttcgccgcg
gagtccggggagccctggatgtcctttgagaccctacgaggaaagaaatg
gagatctggcatggaaagttaacccacagaaagcagttgactaacaaaat
gtagattctaaaaatcttgggatctctgtttctatgtttacttgctctgt
tttttaacactggacgctgaacccagagcctcacacactccaggcaagca
agcatcccaccactgagctatatccccagcccctaattagcttttgatca
ctactgttagttccctaatcaatacaatattctctctatttcttactaaa
tttgaatacgagtttaattcatattttaaaaactgaattctaaaaataac
tgttataaaaggctccaatctagcaaagaatctgctaaatatactgaggc
tttttagaagtgtgtttagctcagtagtattgagacaacatgccttcaga
cataatctgtttatcattactgagaagttggaccacatccagccctgtct
ctaatccagtcactgttgcaattcatgaatgaactgaccaaggaaagaga
ctgtccacagattcatccaaagggctctttaaaaaaaaaaagccatctag
gaaatcactatagaaatctttctaggtcagagaacacgaacaatctaatc
cctcattacaccctaggttaaaaatagatgtgaataactccactaggaag
ttctgcaaagattaaaagaagttgaacaagaagaaagggagatttgaggc
ttattggatacaactatggatcaatttcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_144848761_144849678
seq2: B6Ng01-057P03.b_166_1075

seq1  ATCATCTATATGATGTTGAGCCTTCTCATCAAAACTATACTTCCATATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTATATGATGTTGAGCCTTCTCATCAAAACTATACTTCCATATGC  50

seq1  CCACTAATCCTTCCTTCATCTTTTAGAATGTTTTGATTTTCTTTTTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAATCCTTCCTTCATCTTTTAGAATGTTTTGATTTTCTTTTTGTAA  100

seq1  TATAATTTATTATAATTGTTATATTGGACATGGTCAATAGAGCCTATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTATTATAATTGTTATATTGGACATGGTCAATAGAGCCTATGCT  150

seq1  CTTCATTTAGAATAGGATGTGATCTCCCATTATATTTTCAACATTAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTAGAATAGGATGTGATCTCCCATTATATTTTCAACATTAGTAA  200

seq1  TTGTATGTAGGGAGTTTTGTGTATCAATTCTGTATCTTTCTAGCTTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGTAGGGAGTTTTGTGTATCAATTCTGTATCTTTCTAGCTTGCTG  250

seq1  TAGTTTTTGTTTGTAGTATTATAGCCTGATCTCTTTGAGTTTTCTAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTTGTTTGTAGTATTATAGCCTGATCTCTTTGAGTTTTCTAGATA  300

seq1  ACTCAACATGTTCTGGATATATTGGTAGCCTTACTACTCTGTTAATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACATGTTCTGGATATATTGGTAGCCTTACTACTCTGTTAATTTTT  350

seq1  ACATTTCTAGTCTTTTTTATCTTGTATAATTTCACTGTCTAATACTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTAGTCTTTTTTATCTTGTATAATTTCACTGTCTAATACTTTCT  400

seq1  GGTACAATGTTAAACTATAATGATAATAGGAACTTTTAAGACTCGTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAATGTTAAACTATAATGATAATAGGAACTTTTAAGACTCGTCTCT  450

seq1  GAATAGGGATGCTTTCATGTTTATTCCTAAAATATGATACTGATTTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGGATGCTTTCATGTTTATTCCTAAAATATGATACTGATTTGGGA  500

seq1  ACTAAAATAAATGTAGCATAAGAACAACCAGTCTTCCAAGATCTTGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATAAATGTAGCATAAGAACAACCAGTCTTCCAAGATCTTGCAGG  550

seq1  GTTCCTTTATTAATGCTTTCCCCTGTGGTTTTGGCTAAGGAAAATGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTTATTAATGCTTTCCCCTGTGGTTTTGGCTAAGGAAAATGGGAA  600

seq1  AAGGTGACAAGAACTCTTTGATGATTTTTTTTCTTCTATGTAAATTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGACAAGAACTCTTTGATGATTTTTTTTCTTCTATGTAAATTGTGT  650

seq1  GTATGCACATGTGTGCATATATAAAACAAGTACTATATTTTGTCTGTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCACATGTGTGCATATATAAAACAAGTACTATATTTTGTCTGTCCT  700

seq1  GGAAATTGAACCTAGGGCCTAGAACATGCTGGAGTCAGTTTTAGTAGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGAACCTAGGGCCTAGAACATGCTGGAGTCAGTTTTAGTAGTCC  750

seq1  CTCGAAAGAAAATATTCCATTTTTGTAAGAATCTTTCGCCAATCTGTATT  800
      |||||||| |||||||||| |||||| |||||||||||||||||||||||
seq2  CTCGAAAG-AAATATTCCA-TTTTGT-AGAATCTTTCGCCAATCTGTATT  797

seq1  TTGTATTTTGTCTATCATTTCTAATTTTATTAGCAACTCTTCATCTTTTC  850
      ||||||||||||||||| |||||||||| |||||||||||||||||||||
seq2  TTGTATTTTGTCTATCA-TTCTAATTTT-TTAGCAACTCTTCATCTTTTC  845

seq1  CTTGATGAAGTTGGCTAGCATTTCACCTGCTTAACTGACTTCAGAGGAAC  900
      || |||| || ||||||||| ||||||||||| ||||||||| |||||| 
seq2  CTGGATG-AGGTGGCTAGCA-TTCACCTGCTT-ACTGACTTCCGAGGAAA  892

seq1  ACTTCCATTTATGCTTTC  918
      ||||||||||||||||||
seq2  ACTTCCATTTATGCTTTC  910

seq1: chr3_145000014_145001164
seq2: B6Ng01-057P03.g_68_1198 (reverse)

seq1  AATGAATATTGATCCACTAAGTTTGTAT-CAATAAGCCTCAAAAATCTCT  49
      |||||| ||||||||| ||   |||||| |||||||||||  ||||||| 
seq2  AATGAA-ATTGATCCA-TA--GTTGTATCCAATAAGCCTC--AAATCTC-  43

seq1  CCTTTCTTCTTTGTTTCAACTTCTTTTATTCTGTTGCAGATCTCTCTAGT  99
      |||||||||||   |||||||||||||| ||| ||||||| ||  |||||
seq2  CCTTTCTTCTT--GTTCAACTTCTTTTAATCT-TTGCAGAACTTCCTAGT  90

seq1  GGGGTTAATTTCACCATCTATGTTATAACCTAGGGTGTTAATGAGGGATT  149
      || ||||  |||| ||||||| || |||||||||||| ||||||||||||
seq2  GGAGTTA--TTCA-CATCTAT-TTTTAACCTAGGGTG-TAATGAGGGATT  135

seq1  AGGATTTGTTCGTGTTTCTCTGACCTAGAAAAGATTTCTATAGTTGATTT  199
      ||   ||||||||| ||||||||||||| |||||||||||||| ||||||
seq2  AG--ATTGTTCGTG-TTCTCTGACCTAG-AAAGATTTCTATAG-TGATTT  180

seq1  CCTAGATGGCTTTTTTTTTTTTAAAGAGCCCTTTGGATGAATCTGTGGAC  249
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATGGC-TTTTTTTTTTTAAAGAGCCCTTTGGATGAATCTGTGGAC  229

seq1  AGTCTCTTTCCTTGGTCAGTTCATTCATGAATTGCAACAGTGACTGGATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTTCCTTGGTCAGTTCATTCATGAATTGCAACAGTGACTGGATT  279

seq1  AGAGACAGGGCTGGATGTGGTCCAACTTCTCAGTAATGATAAACAGATTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGGCTGGATGTGGTCCAACTTCTCAGTAATGATAAACAGATTA  329

seq1  TGTCTGAAGGCATGTTGTCTCAATACTACTGAGCTAAACACACTTCTAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAAGGCATGTTGTCTCAATACTACTGAGCTAAACACACTTCTAAA  379

seq1  AAGCCTCAGTATATTTAGCAGATTCTTTGCTAGATTGGAGCCTTTTATAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCAGTATATTTAGCAGATTCTTTGCTAGATTGGAGCCTTTTATAA  429

seq1  CAGTTATTTTTAGAATTCAGTTTTTAAAATATGAATTAAACTCGTATTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATTTTTAGAATTCAGTTTTTAAAATATGAATTAAACTCGTATTCA  479

seq1  AATTTAGTAAGAAATAGAGAGAATATTGTATTGATTAGGGAACTAACAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGTAAGAAATAGAGAGAATATTGTATTGATTAGGGAACTAACAGT  529

seq1  AGTGATCAAAAGCTAATTAGGGGCTGGGGATATAGCTCAGTGGTGGGATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCAAAAGCTAATTAGGGGCTGGGGATATAGCTCAGTGGTGGGATG  579

seq1  CTTGCTTGCCTGGAGTGTGTGAGGCTCTGGGTTCAGCGTCCAGTGTTAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGCCTGGAGTGTGTGAGGCTCTGGGTTCAGCGTCCAGTGTTAAA  629

seq1  AAACAGAGCAAGTAAACATAGAAACAGAGATCCCAAGATTTTTAGAATCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGCAAGTAAACATAGAAACAGAGATCCCAAGATTTTTAGAATCT  679

seq1  ACATTTTGTTAGTCAACTGCTTTCTGTGGGTTAACTTTCCATGCCAGATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGTTAGTCAACTGCTTTCTGTGGGTTAACTTTCCATGCCAGATC  729

seq1  TCCATTTCTTTCCTCGTAGGGTCTCAAAGGACATCCAGGGCTCCCCGGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTCTTTCCTCGTAGGGTCTCAAAGGACATCCAGGGCTCCCCGGAC  779

seq1  TCCGCGGCGAACACGTAAGTGCTTTCTGGCATTCTCTGGTCGCTAAGGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCGGCGAACACGTAAGTGCTTTCTGGCATTCTCTGGTCGCTAAGGTG  829

seq1  GGCATAAAGCATCTCGCCGGGGAGATAATTCCTCTCTCGCCACTGCCATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAAAGCATCTCGCCGGGGAGATAATTCCTCTCTCGCCACTGCCATG  879

seq1  TTTCCTCCGAGTTATTCTCATTTTATATAGAGCAAAAAGAACAGCTTTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCGAGTTATTCTCATTTTATATAGAGCAAAAAGAACAGCTTTTA  929

seq1  ATCGACTAGCTATAGATTATCAGCAAAATTATGAACTAGCAACGTTTTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGACTAGCTATAGATTATCAGCAAAATTATGAACTAGCAACGTTTTAG  979

seq1  TCTTCTTGCTTTCTCTTTTCCTGCTGTGTTCAGAACAGTGGGTCTTAAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGCTTTCTCTTTTCCTGCTGTGTTCAGAACAGTGGGTCTTAAAC  1029

seq1  CTCTGATTCACAAGTCTCTTCGAGCATTCTGTAATGACTACAGGCCCTCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATTCACAAGTCTCTTCGAGCATTCTGTAATGACTACAGGCCCTCT  1079

seq1  CCAAGAAAATATACATATCTATGCGCACCGCTGACCTTCAACTTTAGAAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAAATATACATATCTATGCGCACCGCTGACCTTCAACTTTAGAAT  1129

seq1  TC  1151
      ||
seq2  TC  1131