BAC Information

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BAC

Clone NameB6Ng01-058G02
Chromosome3 (Build37)
Map Location 119,528,604 - 119,529,519
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058G02.bB6Ng01-058G02.g
ACCDH879974DH879975
length9121,244
definitionDH879974|Mus musculus domesticus DNA, BAC clone: B6Ng01-058G02, 5' end.DH879975|Mus musculus domesticus DNA, BAC clone: B6Ng01-058G02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttcaaagtatgaggggtaactccatagcatgactgcaggctc
agtgaagcccaacacagcacaacagcttctgggcacacttttatatccat
tctttccaaacaacggagtaaagatttaaatggaaagaattcacagtgag
cacagaaagcagttaagatgggaaatttgggtaaatttccaggataaagc
attcattgtctcatgacaggtggtggatgacattactcgaaaggtactta
ccacctagtatcttcatggaaattaggcaaacatctaaagaggacatatt
ctgcctctctaatatagatgagctttcaatgttaatttcttgacttctca
tttacatacactacttcttgggtaattctcagctctttcataccacccta
atatcaacagccaagattttttaactgctcttgtctgctctagcttctga
taatatgcagcatgtccacttcatatctaagtagcctctcaaagttaatg
caacaaaactggtttctctagatgtttatacatctgatcctttttttatg
tcaattactgaagctatatatcatatatctatttgtctccaaggcttcca
acccaatttcaattcttttctgtctcctatgatcccaagtgtaatgacaa
ttttggagttcttggtttcttaaaagaaaaaaaaaaaaaaaaacagaaat
attataggaagatgtttccattgtaatcccaggtgtgaggtattgggctg
tttcagattgcccacagcagctgactatgatttgccttgtgctctaccca
gggcataattttgccagctgcagatggtttctgcgattgtgtgatgtttg
ggattctggggattgcaaaggatagataaatgacaggtcccagaggtggg
tgggttgttgtg
gaattcaataaaaatgagggaacaacatgctcaaacttataagacagtat
gaaagtaaagctcatagcactgtcatcataaaaaaattgagagttctcat
actaacaaattaaaagtacatttaaaggctctaggagaaaagaaggagga
ggaggcagcaatagcagcaaatacacacaggaagagtaaattataggaaa
taatcaacttgagggcagaaattaatcaattagaaatgaagaaaacaata
caaagaatcacctaaatcaagagctgattccttgagaaaatcaacaagat
agacaaatccttggtcaaactaactaaaaggcagagagattctccaaatt
aacaaaatcagaaatgaagacagggacataacaatggacactgaggacaa
tcaaagactcagcatggcttattcaaaagcctgttcttcacaaaactgga
aaatccaaatgaaatggatgatatttttagatagataccaattccaaaat
ctaaatcaagatcaggtaaactatctgaagacatagaagtagtcattaaa
agtctcccaatcaaaaaatgccttgaaccagatgattttattgaagaatt
ctaccaaagtttcaaagagctaatgccaatactcctcaaaactattccac
aatatataaacagaagaaacactgtcaaactcattttatgagaccagtta
ccctgatacataaaccacacaaaggttcagcaaagagagtttcagaccaa
tttcccttatgaatattgatgggaaaatattcaagaaaatactggcaaac
caaatccaagaacacatcaaagacatcatccatcatgatcaaataggctt
tatccatggatgcaggatggtttagtatgctaaatccatcaatgcaatcc
accatataaacaagtggaaagaaaaaatccacatatcatctcactagatg
ccgcaaagcctttcacaaaatcaacactcttcatgatagtctgggaagag
gggatacaagtgcatacctaaacacaaaatagtcatttgctgaaggccag
tggcaacatcaaattaagtgaaagagaaacttaagcattccataaattag
aacatagctacattcccccatcctcttctaatagtactgaagtcttgcta
gggccaatagacactaagggatgatgagccgagtcagtatctgtccagta
agatgatgcattaaggcacctccagatactctctgcgaacgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119528604_119529519
seq2: B6Ng01-058G02.b_43_954 (reverse)

seq1  CACAACAACCCACCCACCCTCTGGGGACCCTGTCATTTATCTATCCTTTG  50
      |||||||||||||||| ||||||||   ||||||||||||||||||||||
seq2  CACAACAACCCACCCA-CCTCTGGG--ACCTGTCATTTATCTATCCTTTG  47

seq1  CAAATCCCCAGAATCCCAAACATCACACAATCGCAGAAACCATCTGCAGC  100
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-AATCCCCAGAATCCCAAACATCACACAATCGCAGAAACCATCTGCAGC  96

seq1  TGGCAAAATTATGCCCTGGGTAGAGCACAAGGCAAATCATAGTCAGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAATTATGCCCTGGGTAGAGCACAAGGCAAATCATAGTCAGCTGC  146

seq1  TGTGGGCAATCTGAAACAGCCCAATACCTCACACCTGGGATTACAATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCAATCTGAAACAGCCCAATACCTCACACCTGGGATTACAATGGA  196

seq1  AACATCTTCCTATAATATTTCTGTTTTTTTTTTTTTTTTTCTTTTAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTTCCTATAATATTTCTGTTTTTTTTTTTTTTTTTCTTTTAAGAA  246

seq1  ACCAAGAACTCCAAAATTGTCATTACACTTGGGATCATAGGAGACAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAACTCCAAAATTGTCATTACACTTGGGATCATAGGAGACAGAAA  296

seq1  AGAATTGAAATTGGGTTGGAAGCCTTGGAGACAAATAGATATATGATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGAAATTGGGTTGGAAGCCTTGGAGACAAATAGATATATGATATA  346

seq1  TAGCTTCAGTAATTGACATAAAAAAAGGATCAGATGTATAAACATCTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCAGTAATTGACATAAAAAAAGGATCAGATGTATAAACATCTAGA  396

seq1  GAAACCAGTTTTGTTGCATTAACTTTGAGAGGCTACTTAGATATGAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAGTTTTGTTGCATTAACTTTGAGAGGCTACTTAGATATGAAGTG  446

seq1  GACATGCTGCATATTATCAGAAGCTAGAGCAGACAAGAGCAGTTAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCTGCATATTATCAGAAGCTAGAGCAGACAAGAGCAGTTAAAAAA  496

seq1  TCTTGGCTGTTGATATTAGGGTGGTATGAAAGAGCTGAGAATTACCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCTGTTGATATTAGGGTGGTATGAAAGAGCTGAGAATTACCCAAG  546

seq1  AAGTAGTGTATGTAAATGAGAAGTCAAGAAATTAACATTGAAAGCTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTGTATGTAAATGAGAAGTCAAGAAATTAACATTGAAAGCTCATC  596

seq1  TATATTAGAGAGGCAGAATATGTCCTCTTTAGATGTTTGCCTAATTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGAGAGGCAGAATATGTCCTCTTTAGATGTTTGCCTAATTTCCA  646

seq1  TGAAGATACTAGGTGGTAAGTACCTTTCGAGTAATGTCATCCACCACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATACTAGGTGGTAAGTACCTTTCGAGTAATGTCATCCACCACCTG  696

seq1  TCATGAGACAATGAATGCTTTATCCTGGAAATTTACCCAAATTTCCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGACAATGAATGCTTTATCCTGGAAATTTACCCAAATTTCCCATC  746

seq1  TTAACTGCTTTCTGTGCTCACTGTGAATTCTTTCCATTTAAATCTTTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGCTTTCTGTGCTCACTGTGAATTCTTTCCATTTAAATCTTTACT  796

seq1  CCGTTGTTTGGAAAGAATGGATATAAAAGTGTGCCCAGAAGCTGTTGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTGTTTGGAAAGAATGGATATAAAAGTGTGCCCAGAAGCTGTTGTGC  846

seq1  TGTGTTGGGCTTCACTGAGCCTGCAGTCATGCTATGGAGTTACCCCTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGGGCTTCACTGAGCCTGCAGTCATGCTATGGAGTTACCCCTCAT  896

seq1  ACTTTGAAGTGAATTC  916
      ||||||||||||||||
seq2  ACTTTGAAGTGAATTC  912