BAC Information

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BAC

Clone NameB6Ng01-058G17
Chromosome3 (Build37)
Map Location 73,553,148 - 73,710,524
singlet/doubletdoublet
Overlap genenone
Upstream gene2010204N08Rik, Slitrk3, Bche
Downstream geneLOC667425, LOC619764, LOC667434, LOC100041551, EG667459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058G17.bB6Ng01-058G17.g
ACCDH880002DH880003
length801758
definitionDH880002|Mus musculus domesticus DNA, BAC clone: B6Ng01-058G17, 5' end.DH880003|Mus musculus domesticus DNA, BAC clone: B6Ng01-058G17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,709,936 - 73,710,524)(73,553,148 - 73,553,905)
sequence
gaattcttctgtattggttccatgtccaagaatagcactgtatattccaa
tcacctagacctaataagaaatgttgaaaacaggaactataaatgtaaat
gtcacttttatttcctcagaggaacagttgaaaagagagctatacccaag
tgtgtgaagacatgacttgggaagagcctatagtgtttctatttctgtat
tttaggcctatgcctagaagtttctaatctatatacaacctgaatttctg
caagtccagaccctgaaggctttaccttccgtcctctgtcactaacctag
gccatacatatcaaagtctcagatttactgcaaataaactcactctttct
agattttttttcttttcctttttttttttttttttttttttttttttttt
tgactctaactggctagtccaaatcagctgtgctctctcaaactcctctc
caaacttaactcaaaatggctcctcttggcttctgactgaattgcactgc
ttggagagactgcccctgaactgttctaactcaactgctctgctctgaaa
tgaactaattcaacgtcactcatctaaactgaactgaactgaactgaatt
gaattgaattgaattgaaataataataataataaaaaagatgacagactt
tccctcactgctctgtatttagcctgtctttcttctcttttctcataaga
gttggatatattatatctttgacttattctgtcaaatctttctctgattt
gacattttgtttgtccctcaattagaggtcattgtttgggaataaatgtg
t
gaattccctatgattcagtcccacagcatgtagcttctcattcatttatc
caagggactaatgaatgaaagagatgaataggagatgaaaggtggagatt
atatccaaattagaagactgagactttgaaataacacatatgaacatcat
agcgtgataggtgatacgtctcatagaaaacaaatcagcaggctggagag
atgactcagtgagtaacagtatctgtgtcagtatgaggaactgagttaag
gttctcagaagaaagtaaagttgcatgcattagtgtaaaattcttgacct
gaaaagagtaaaaggagacaggagatggagaagagtctctggaaactctc
aagctggctaggttggtgtccacagctgtgaagaaagggaccctgtctaa
caaaatgatggaaagtgaaaagtgacaaccaacactgtcttctgacttct
atacttgagccatggtgaacacacatgactcccacctctgacacacatac
acacataaatacaacacatacagacattttaagaaagaaaaaaaaaatca
cacactcctgaatctactgctattcaacactgagagagtgacaaacagaa
tgagaattgtgtctgggaactgacagtgaccattggctaacagccgttaa
gaagatggtaatcacagtctttcaggaaaaggagctagctagatcctgcc
aaaactgtattccttcttcttcttctatgtatgtatgtatgtatgtatgt
atgtatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_73709936_73710524
seq2: B6Ng01-058G17.b_50_638 (reverse)

seq1  GTTCAGTTCAGTTTAGATGAGTGACGTTGAATTAGTTCATTTCAGAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTTCAGTTTAGATGAGTGACGTTGAATTAGTTCATTTCAGAGCAG  50

seq1  AGCAGTTGAGTTAGAACAGTTCAGGGGCAGTCTCTCCAAGCAGTGCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTGAGTTAGAACAGTTCAGGGGCAGTCTCTCCAAGCAGTGCAATT  100

seq1  CAGTCAGAAGCCAAGAGGAGCCATTTTGAGTTAAGTTTGGAGAGGAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGAAGCCAAGAGGAGCCATTTTGAGTTAAGTTTGGAGAGGAGTTT  150

seq1  GAGAGAGCACAGCTGATTTGGACTAGCCAGTTAGAGTCAAAAAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCACAGCTGATTTGGACTAGCCAGTTAGAGTCAAAAAAAAAAAA  200

seq1  AAAAAAAAAAAAAAAAAAAAAGGAAAAGAAAAAAAATCTAGAAAGAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAGGAAAAGAAAAAAAATCTAGAAAGAGTGA  250

seq1  GTTTATTTGCAGTAAATCTGAGACTTTGATATGTATGGCCTAGGTTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTGCAGTAAATCTGAGACTTTGATATGTATGGCCTAGGTTAGTG  300

seq1  ACAGAGGACGGAAGGTAAAGCCTTCAGGGTCTGGACTTGCAGAAATTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGACGGAAGGTAAAGCCTTCAGGGTCTGGACTTGCAGAAATTCAG  350

seq1  GTTGTATATAGATTAGAAACTTCTAGGCATAGGCCTAAAATACAGAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATATAGATTAGAAACTTCTAGGCATAGGCCTAAAATACAGAAATA  400

seq1  GAAACACTATAGGCTCTTCCCAAGTCATGTCTTCACACACTTGGGTATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTATAGGCTCTTCCCAAGTCATGTCTTCACACACTTGGGTATAG  450

seq1  CTCTCTTTTCAACTGTTCCTCTGAGGAAATAAAAGTGACATTTACATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTTCAACTGTTCCTCTGAGGAAATAAAAGTGACATTTACATTTA  500

seq1  TAGTTCCTGTTTTCAACATTTCTTATTAGGTCTAGGTGATTGGAATATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCTGTTTTCAACATTTCTTATTAGGTCTAGGTGATTGGAATATAC  550

seq1  AGTGCTATTCTTGGACATGGAACCAATACAGAAGAATTC  589
      |||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTATTCTTGGACATGGAACCAATACAGAAGAATTC  589

seq1: chr3_73553148_73553905
seq2: B6Ng01-058G17.g_68_825

seq1  GAATTCCCTATGATTCAGTCCCACAGCATGTAGCTTCTCATTCATTTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTATGATTCAGTCCCACAGCATGTAGCTTCTCATTCATTTATC  50

seq1  CAAGGGACTAATGAATGAAAGAGATGAATAGGAGATGAAAGGTGGAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGACTAATGAATGAAAGAGATGAATAGGAGATGAAAGGTGGAGATT  100

seq1  ATATCCAAATTAGAAGACTGAGACTTTGAAATAACACATATGAACATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAAATTAGAAGACTGAGACTTTGAAATAACACATATGAACATCAT  150

seq1  AGCGTGATAGGTGATACGTCTCATAGAAAACAAATCAGCAGGCTGGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGATAGGTGATACGTCTCATAGAAAACAAATCAGCAGGCTGGAGAG  200

seq1  ATGACTCAGTGAGTAACAGTATCTGTGTCAGTATGAGGAACTGAGTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCAGTGAGTAACAGTATCTGTGTCAGTATGAGGAACTGAGTTAAG  250

seq1  GTTCTCAGAAGAAAGTAAAGTTGCATGCATTAGTGTAAAATTCTTGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGAAGAAAGTAAAGTTGCATGCATTAGTGTAAAATTCTTGACCT  300

seq1  GAAAAGAGTAAAAGGAGACAGGAGATGGAGAAGAGTCTCTGGAAACTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGTAAAAGGAGACAGGAGATGGAGAAGAGTCTCTGGAAACTCTC  350

seq1  AAGCTGGCTAGGTTGGTGTCCACAGCTGTGAAGAAAGGGACCCTGTCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGCTAGGTTGGTGTCCACAGCTGTGAAGAAAGGGACCCTGTCTAA  400

seq1  CAAAATGATGGAAAGTGAAAAGTGACAACCAACACTGTCTTCTGACTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGATGGAAAGTGAAAAGTGACAACCAACACTGTCTTCTGACTTCT  450

seq1  ATACTTGAGCCATGGTGAACACACATGACTCCCACCTCTGACACACATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGAGCCATGGTGAACACACATGACTCCCACCTCTGACACACATAC  500

seq1  ACACATAAATACAACACATACAGACATTTTAAGAAAGAAAAAAAAAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAAATACAACACATACAGACATTTTAAGAAAGAAAAAAAAAATCA  550

seq1  CACACTCCTGAATCTACTGCTATTCAACACTGAGAGAGTGACAAACAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCCTGAATCTACTGCTATTCAACACTGAGAGAGTGACAAACAGAA  600

seq1  TGAGAATTGTGTCTGGGAACTGACAGTGACCATTGGCTAACAGCCGTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATTGTGTCTGGGAACTGACAGTGACCATTGGCTAACAGCCGTTAA  650

seq1  GAAGATGGTAATCACAGTCTTTCAGGAAAAGGAGCTAGCTAGATCCTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGGTAATCACAGTCTTTCAGGAAAAGGAGCTAGCTAGATCCTGCC  700

seq1  AAAACTGTATTCCTTCTTCTTCTTCTATGTATGTATGTATGTATGTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTATTCCTTCTTCTTCTTCTATGTATGTATGTATGTATGTATGT  750

seq1  ATGTATGT  758
      ||||||||
seq2  ATGTATGT  758