BAC Information

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BAC

Clone NameB6Ng01-058I11
Chromosome3 (Build37)
Map Location 136,329,404 - 136,330,439
singlet/doubletsinglet
Overlap genenone
Upstream geneNfkb1, ENSMUSG00000045520, Slc39a8, LOC100039350, LOC383923, Bank1, LOC100039477, LOC668868
Downstream genePpp3ca, LOC668870, LOC100039447, Emcn, EG229862, Ddit4l, LOC668874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058I11.bB6Ng01-058I11.g
ACCDH880081DH880082
length1,1591,028
definitionDH880081|Mus musculus domesticus DNA, BAC clone: B6Ng01-058I11, 5' end.DH880082|Mus musculus domesticus DNA, BAC clone: B6Ng01-058I11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatatcaaatagctaagatgtagctaaagaaata
ttcaatattcttaggcatcaaagatatgcaaattgaaacaatcctgagat
tccacttcacaccagtcagaatggctaggatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgctggtg
ggattgcaagctggtataaccactcttgaaatcagtctggtggttcctca
gagaattgaacatagtactaccaaaggacccagctataccactcctgggc
atatacccccaaaatgctccaacatataacaatgacacatgctccactat
gttcatagcagccatatttataatagcgagaagctggaaagaaaccagat
gtccctcaacagaggaatggatacagaaaatgtgttacatttacacaatg
gagtactatcagcttctaaaacaatgaatttatgaaattctcaggcaaat
gaatggaactagaaaaaatcatcctgagtgaggtaatccagtcacaaaag
agcacacatggtatacactcaccaattagcccagaagctcagaatgccca
agatacaattcacagaccacatgaagctcaagaagaaggaaggccaaagt
gtggatactttggtccttcttagaagggaaaacaaatacccatgggaaga
gaaacagagacaaagtgtggagcagactgaaggaaagacaatccagagac
tgtcccacctggggattcatccaatatacagtcaccaaactccgatacta
ttatggatgctaagaaatgcttgctgaaaggagcctgatataggtgtctc
ctgagaggctttaccagtgcctaacaaatacagagatggatcctttcagc
cagccattggactgagcacagggtccccaatggaggagctggagaaagga
cccagtttcggaaggggtctgcagcccaatagaggagcacatatgaaaca
accactacccccaggctccaggactaaacacaccaataggcctcatgctc
tagcgcatagtaaaaaggagcttgttgtcaccatgggagggagtagcctg
cctgtaaagctgatgccatgtatggaataacggcgggaagcagaatagtg
tggtgtggt
gaattccctttcacagcccaaccataatgagtccatgcgattagttcttg
gtattgataatctgggccaagctgtctgtgacatgccagcagagtgatgg
agcaatgatacgcacccttccatctgtaagcttcttcagctgaatacaga
gctttctaagaccctgctatagacagagtatcaaatagcgacaagtctta
ttatgacaacatcaagaactgttgatcacctccttagaaagactgcatga
ggctttaaataaaaaaaaaatagtcatttctgtgttagtcgctaagattt
atcgatgtatccattaggaaattaatatacagccattgcttattttattc
caaagtaaactgtgtactaagatacagaagtgctacctcagtgttatgta
agagactaaaaacattcacacctgtcttaatacatgaacatctaatcttc
atttctgtaaacaaacaattcatgtaccagttatgttttgagcaactgtg
caaagtactggctcatttctcaacaaatgtgaagaataaaggattcagtc
agataattccctttagtcttgatgcataggtcttacagataagttatcct
tgcaaggatcaatgtgtaaggcgctgctcccacaaagagttatgtactgg
aagattgatggagtgtcttagttagggttttactgctgtgcacagacacc
atgaccaaggcaactttcaaatggacaatatttaatcggggctgtcttac
aggttcagagattcagtccattgtcatcaaggtgggaacatgacggcatc
caggcaggcatgttacagctggagctgagagttctatatcttcatctgaa
ggcttctagcagaatactggcttccaggcagctagaatgagggtcttaaa
cccacacccacagtaacactttctccaacaagcacactactctaacaggc
cataccttctaatagtgccactcactgggtcagcaacccaaaccatcaca
tggaggggatgttgggtggcaatttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_136329404_136330439
seq2: B6Ng01-058I11.g_68_1095 (reverse)

seq1  CCCAAATCTGCACCCCAACATCCCCTCCATGTGATGGTTTGTGTATGCTT  50
      ||||||| |||  |||||||||||||||||||||||||||| || ||| |
seq2  CCCAAAT-TGCCACCCAACATCCCCTCCATGTGATGGTTTGGGT-TGC-T  47

seq1  GACCCAGTGAGTGGCACTATTAGAAGGTATGGCCCTGTTAGAGTAGGTGT  100
      |||||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  GACCCAGTGAGTGGCACTATTAGAAGGTATGG-CCTGTTAGAGTA-GTGT  95

seq1  GGCCTTGTTGGAGGAAGTGTTACTGTGGGTGTGGGTTTTAAGACCCTCAT  150
      |  |||||||||| ||||||||||||||||||||| ||||||||||||||
seq2  G--CTTGTTGGAGAAAGTGTTACTGTGGGTGTGGG-TTTAAGACCCTCAT  142

seq1  TCTAGCTGCCTGGAAGCCAGTATTCTGCTAGAAGCCTTCAGATGAAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTGCCTGGAAGCCAGTATTCTGCTAGAAGCCTTCAGATGAAGATA  192

seq1  TAGAACTCTCAGCTCCAGCTGTAACATGCCTGCCTGGATGCCGTCATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTCTCAGCTCCAGCTGTAACATGCCTGCCTGGATGCCGTCATGTT  242

seq1  CCCACCTTGATGACAATGGACTGAATCTCTGAACCTGTAAGACAGCCCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTTGATGACAATGGACTGAATCTCTGAACCTGTAAGACAGCCCCG  292

seq1  ATTAAATATTGTCCATTTGAAAGTTGCCTTGGTCATGGTGTCTGTGCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATATTGTCCATTTGAAAGTTGCCTTGGTCATGGTGTCTGTGCACA  342

seq1  GCAGTAAAACCCTAACTAAGACACTCCATCAATCTTCCAGTACATAACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAAAACCCTAACTAAGACACTCCATCAATCTTCCAGTACATAACTC  392

seq1  TTTGTGGGAGCAGCGCCTTACACATTGATCCTTGCAAGGATAACTTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGAGCAGCGCCTTACACATTGATCCTTGCAAGGATAACTTATCT  442

seq1  GTAAGACCTATGCATCAAGACTAAAGGGAATTATCTGACTGAATCCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGACCTATGCATCAAGACTAAAGGGAATTATCTGACTGAATCCTTTA  492

seq1  TTCTTCACATTTGTTGAGAAATGAGCCAGTACTTTGCACAGTTGCTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACATTTGTTGAGAAATGAGCCAGTACTTTGCACAGTTGCTCAAA  542

seq1  ACATAACTGGTACATGAATTGTTTGTTTACAGAAATGAAGATTAGATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACTGGTACATGAATTGTTTGTTTACAGAAATGAAGATTAGATGTT  592

seq1  CATGTATTAAGACAGGTGTGAATGTTTTTAGTCTCTTACATAACACTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTAAGACAGGTGTGAATGTTTTTAGTCTCTTACATAACACTGAG  642

seq1  GTAGCACTTCTGTATCTTAGTACACAGTTTACTTTGGAATAAAATAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACTTCTGTATCTTAGTACACAGTTTACTTTGGAATAAAATAAGCA  692

seq1  ATGGCTGTATATTAATTTCCTAATGGATACATCGATAAATCTTAGCGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGTATATTAATTTCCTAATGGATACATCGATAAATCTTAGCGACT  742

seq1  AACACAGAAATGACTATTTTTTTTTTATTTAAAGCCTCATGCAGTCTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGAAATGACTATTTTTTTTTTATTTAAAGCCTCATGCAGTCTTTC  792

seq1  TAAGGAGGTGATCAACAGTTCTTGATGTTGTCATAATAAGACTTGTCGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGGTGATCAACAGTTCTTGATGTTGTCATAATAAGACTTGTCGCT  842

seq1  ATTTGATACTCTGTCTATAGCAGGGTCTTAGAAAGCTCTGTATTCAGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATACTCTGTCTATAGCAGGGTCTTAGAAAGCTCTGTATTCAGCTG  892

seq1  AAGAAGCTTACAGATGGAAGGGTGCGTATCATTGCTCCATCACTCTGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTTACAGATGGAAGGGTGCGTATCATTGCTCCATCACTCTGCTG  942

seq1  GCATGTCACAGACAGCTTGGCCCAGATTATCAATACCAAGAACTAATCGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCACAGACAGCTTGGCCCAGATTATCAATACCAAGAACTAATCGC  992

seq1  ATGGACTCATTATGGTTGGGCTGTGAAAGGGAATTC  1036
      ||||||||||||||||||||||||||||||||||||
seq2  ATGGACTCATTATGGTTGGGCTGTGAAAGGGAATTC  1028