BAC Information

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BAC

Clone NameB6Ng01-059G04
Chromosome3 (Build37)
Map Location 15,727,716 - 15,846,881
singlet/doubletdoublet
Overlap geneLOC100038947, LOC622425, LOC664795
Upstream geneEG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
Downstream geneLOC381484, Ythdf3, LOC100040034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059G04.bB6Ng01-059G04.g
ACCDH880685DH880686
length9961,087
definitionDH880685|Mus musculus domesticus DNA, BAC clone: B6Ng01-059G04, 5' end.DH880686|Mus musculus domesticus DNA, BAC clone: B6Ng01-059G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,846,366 - 15,846,881)(15,727,716 - 15,728,811)
sequence
gaattcaaggatgtacatggtaatatctattcttggttgtcaacttgact
atatctgaaatgaactgtaatccagaattggagggcatacctactgaaaa
ggagttggaaatacctgatattccttggcttaatgttgatgaggcaactt
taaggctcaggggaattgcaattctagagtgcatatgttatgtaaaacct
aatcctccacaatggtaaggcccagaagatatggccttcatcaatcttat
aagatggtaagaggggcacaaagacatttgaagaatttcattcttgccct
ttaccttgtgccataccttagggtttgatgatgctgctcacttggatgaa
ttgaatgcaaagagtttaattaggccttgaggtaacaaggtccaagtggc
agcactgaatagccaaagataaggtgattgtacctactataatgggaagt
atagacaagacaacattcataatgacctagcctctaatggccagcatagg
aaaggtgaaatttataatggcataactcatatgtacctttggtactggct
aatcaatcatggtatttccaggcatgaaatagataggaagcctactgcat
atgtgtttgatatgtataagcagagaaattctcagacaaatgaaaaaaat
acttcatcggttgatggcaaaaaaataatcttggccagtgaattaatttg
cagacttgagccagtttgcagacccataacctcttgaataaatgtatgtc
caggttcccctaggaaggatcttgaggaaacacctgaaagttttgctgtt
agtctttttcccgttcttcacaaaagggttctttggccttttacaagtgt
aactgtacactgggggaaaggaaataatcaaatgttctatggtccattgg
atattagtctgacttgaccctgattccaggagatcacagaaacactgttg
ctctcagttaagtagtagtttatggagtgtgtgattaatggatttt
gaattcatcatgaaacacttcttgtcttctttgaggagagagttgtgaat
ctctgtcaactgttaaattcttgattttcagaatcctgtgggtcagggac
tatagttcccactatgctaggagaactgatccctagggagagttacaagg
ttagcatgatccagaaatgcttctacttggtagtattttggatgatccct
gagagattgcccttagaccaagaggttttcagtctctcaagtactcaggg
aaagctgtgaacagggcatatacatgaaagaggatggtaaatggaaagga
agagagttgacatgctgccttatttagatatgagcatcctggaaaatttc
agagttgggggaataaaagaatcctagtgaagtataaaacagcctgatgg
aaatgcttgctggaaaacatgcaagaaaaagatgaaaattgtacacataa
gaatgcaagagtaaagacttcatgatttagaatctcaactatcatgtagt
ccatggccaccctagtatagatgccatctaaaatctttctgttgctcatg
agaatctaattttaattttgaagtcaatcaaagattaaagtttgttttta
agaaaagaaacaggatggttgcatagttcattgggtgcagtgttttcaca
acatattagcggccctcagctcaatcccaacaagccacacccaacaatac
acataatttgggttataatcctaatacctggggtatggaatatagaaggt
cagaggtatgatttcttacttgcccaagttcatagaacagcatctgatag
ttgtatatgttaacttgacacaacctacaattacctagtaagaactttgc
agttaaggacttggtaaaattgtgttagcctgttggtaggtttgtggagg
attgtctgattgtaactgatatggtaaattcattcttatgtaactgcctt
catttcattagactctgggcccacactgcataaaatcagtgaagaaatgt
agtgaacatcaggcaacaaacagaaatggtgggggtattccatccaatgc
ttctgactgagaatgggagtatgaatcctgcctactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15846366_15846881
seq2: B6Ng01-059G04.b_47_562 (reverse)

seq1  TATAAATTTCACCTTTCCTATGCTGGCCATTAGAGGCTAGGTCATTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTTCACCTTTCCTATGCTGGCCATTAGAGGCTAGGTCATTATGA  50

seq1  ATGTTGTCTTGTCTATACTTCCCATTATAGTAGGTACAATCACCTTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTCTTGTCTATACTTCCCATTATAGTAGGTACAATCACCTTATCT  100

seq1  TTGGCTATTCAGTGCTGCCACTTGGACCTTGTTACCTCAAGGCCTAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTATTCAGTGCTGCCACTTGGACCTTGTTACCTCAAGGCCTAATTA  150

seq1  AACTCTTTGCATTCAATTCATCCAAGTGAGCAGCATCATCAAACCCTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTGCATTCAATTCATCCAAGTGAGCAGCATCATCAAACCCTAAG  200

seq1  GTATGGCACAAGGTAAAGGGCAAGAATGAAATTCTTCAAATGTCTTTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGCACAAGGTAAAGGGCAAGAATGAAATTCTTCAAATGTCTTTGTG  250

seq1  CCCCTCTTACCATCTTATAAGATTGATGAAGGCCATATCTTCTGGGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTTACCATCTTATAAGATTGATGAAGGCCATATCTTCTGGGCCTT  300

seq1  ACCATTGTGGAGGATTAGGTTTTACATAACATATGCACTCTAGAATTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGTGGAGGATTAGGTTTTACATAACATATGCACTCTAGAATTGCA  350

seq1  ATTCCCCTGAGCCTTAAAGTTGCCTCATCAACATTAAGCCAAGGAATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCTGAGCCTTAAAGTTGCCTCATCAACATTAAGCCAAGGAATATC  400

seq1  AGGTATTTCCAACTCCTTTTCAGTAGGTATGCCCTCCAATTCTGGATTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTCCAACTCCTTTTCAGTAGGTATGCCCTCCAATTCTGGATTAC  450

seq1  AGTTCATTTCAGATATAGTCAAGTTGACAACCAAGAATAGATATTACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATTTCAGATATAGTCAAGTTGACAACCAAGAATAGATATTACCAT  500

seq1  GTACATCCTTGAATTC  516
      ||||||||||||||||
seq2  GTACATCCTTGAATTC  516

seq1: chr3_15727716_15728811
seq2: B6Ng01-059G04.g_66_1152

seq1  GAATTCATCATGAAACACTTCTTGTCTTCTTTGAGGAGAGAGTTGTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATGAAACACTTCTTGTCTTCTTTGAGGAGAGAGTTGTGAAT  50

seq1  CTCTGTCAACTGTTAAATTCTTGATTTTCAGAATCCTGTGGGTCAGGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCAACTGTTAAATTCTTGATTTTCAGAATCCTGTGGGTCAGGGAC  100

seq1  TATAGTTCCCACTATGCTAGGAGAACTGATCCCTAGGGAGAGTTACAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTCCCACTATGCTAGGAGAACTGATCCCTAGGGAGAGTTACAAGG  150

seq1  TTAGCATGATCCAGAAATGCTTCTACTTGGTAGTATTTTGGATGATCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATGATCCAGAAATGCTTCTACTTGGTAGTATTTTGGATGATCCCT  200

seq1  GAGAGATTGCCCTTAGACCAAGAGGTTTTCAGTCTCTCAAGTACTCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATTGCCCTTAGACCAAGAGGTTTTCAGTCTCTCAAGTACTCAGGG  250

seq1  AAAGCTGTGAACAGGGCATATACATGAAAGAGGATGGTAAATGGAAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGTGAACAGGGCATATACATGAAAGAGGATGGTAAATGGAAAGGA  300

seq1  AGAGAGTTGACATGCTGCCTTATTTAGATATGAGCATCCTGGAAAATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTGACATGCTGCCTTATTTAGATATGAGCATCCTGGAAAATTTC  350

seq1  AGAGTTGGGGGAATAAAAGAATCCTAGTGAAGTATAAAACAGCCTGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGGGGGAATAAAAGAATCCTAGTGAAGTATAAAACAGCCTGATGG  400

seq1  AAATGCTTGCTGGAAAACATGCAAGAAAAAGATGAAAATTGTACACATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTGCTGGAAAACATGCAAGAAAAAGATGAAAATTGTACACATAA  450

seq1  GAATGCAAGAGTAAAGACTTCATGATTTAGAATCTCAACTATCATGTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAAGAGTAAAGACTTCATGATTTAGAATCTCAACTATCATGTAGT  500

seq1  CCATGGCCACCCTAGTATAGATGCCATCTAAAATCTTTCTGTTGCTCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCCACCCTAGTATAGATGCCATCTAAAATCTTTCTGTTGCTCATG  550

seq1  AGAATCTAATTTTAATTTTGAAGTCAATCAAAGATTAAAGTTTGTTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTAATTTTAATTTTGAAGTCAATCAAAGATTAAAGTTTGTTTTTA  600

seq1  AGAAAAGAAACAGGATGGTTGCATAGTTCATTGGGTGCAGTGTTTTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAACAGGATGGTTGCATAGTTCATTGGGTGCAGTGTTTTCACA  650

seq1  ACATATTAGCGGCCCTCAGCTCAATCCCAACAAGCCACACCCAACAATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTAGCGGCCCTCAGCTCAATCCCAACAAGCCACACCCAACAATAC  700

seq1  ACATAATTTGGGTTATAATCCTAATACCTGGGGTATGGAATATAGAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATTTGGGTTATAATCCTAATACCTGGGGTATGGAATATAGAAGGT  750

seq1  CAGAGGTATGATTTCTTACTTGCCCAAGTTCATAGAACAGCATCTGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTATGATTTCTTACTTGCCCAAGTTCATAGAACAGCATCTGATAG  800

seq1  TTGTATATGTTAACTTGACACAACCTACAATTACCTAGTAAGAACTTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATGTTAACTTGACACAACCTACAATTACCTAGTAAGAACTTTGC  850

seq1  AGTTAAGGACTTGGTAAAATTGTGTTAGCCTGTTGGTAGGTTTGTGGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGGACTTGGTAAAATTGTGTTAGCCTGTTGGTAGGTTTGTGGAGG  900

seq1  ATTGTCTTGATTGTTAACTGATATGGTAAATTCATTCTTAATGTAACTGC  950
      |||||| |||||| ||||||||||||||||||||||||| ||||||||||
seq2  ATTGTC-TGATTG-TAACTGATATGGTAAATTCATTCTT-ATGTAACTGC  947

seq1  CTTCATTTCATTAGACTCTGGGCCCCACACTGCATAAAATCAGTGAAGAA  1000
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTTCATTTCATTAGACTCTGGG-CCCACACTGCATAAAATCAGTGAAGAA  996

seq1  ATGTAGGTGAACATCAGGCAACAAACAGAAATGTTGGGTGTATTCTATCT  1050
      ||||| ||||||||||||||||||||||||||| |||| |||||| ||| 
seq2  ATGTA-GTGAACATCAGGCAACAAACAGAAATGGTGGGGGTATTCCATC-  1044

seq1  CAATGCTCTTGACTGTAGATTGGATGTATGAATTCCTGCCTTACTT  1096
      |||||||  |||||| ||| |||  ||||||| ||||||| |||||
seq2  CAATGCTTCTGACTG-AGAATGGGAGTATGAA-TCCTGCC-TACTT  1087