BAC Information

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BAC

Clone NameB6Ng01-059N14
Chromosome3 (Build37)10 (Build37)
Map Location 41,059,197 - 41,059,737114,981,306 - 114,981,839
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059N14.bB6Ng01-059N14.g
ACCDH881005DH881006
length992528
definitionDH881005|Mus musculus domesticus DNA, BAC clone: B6Ng01-059N14, 5' end.DH881006|Mus musculus domesticus DNA, BAC clone: B6Ng01-059N14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,197 - 41,059,737)(114,981,306 - 114,981,839)
sequence
gaattctttgtttagctctgagccccaattttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggattggtaaagatcctttcccaatttgttggtggcctt
tttgtcttattgacggtgtcttttgccttgcagaagctttgcaattttat
gaggtcccatttgtggattctggatcttacagcacaagtcattgctgttc
tattcaggaatttttcccctgtacccatatcttcgagggttttccctact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagataggaatggaccaatttgca
ttcttctacatgataaccgccaggtgtgccagcaccatttgttgaagatg
ctgtcctttttccactggatggtttttgctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtcgctataccagtaccatgcagtttttatcacaattgct
ctgtagtacagctttaggtcaggcatagtgattccaccagaggttctttt
atcattgagaatagtttttgctatcctaggttttttgttattccaaatga
atttgcagattgccctttctaattcgttgcagaattgagttggaattttg
gtggggattgcattgaatctatagattgctttcggcaaaatagccatttt
tactatattagtcctgccaatccatgagcatgggagatctttccatcttc
tgagatctttgatttctttcttcagagacttggagttcttatcatacaga
tctttcacttccttagttagagtcggccaaggtatttatattgtttgtga
ctattgaaaaggtgttatttcctaatttcttctcagcctgtt
ctgatccctgttataaatataatgtggttcttgtatcagcagagtggcag
ctggcgtgtatacaggtgcatatgatgtgagtagagcttctaaggggaga
gggatccaatcttaaaatcaatagggatgtattctgggattgtttgtgta
actttacacacgcacacgaataaaagaggtttttaaaaagtagatttgat
ccacatcaccctactacctcctagggtttccattggggcctgggtgctga
aatctatctattttatgatgagaggcaaatggagaacatatttgagaatg
agaccagggtgtctgtcttagtcagggttttactcctgcacaaaacatca
tgactaaaaagcaagttggggaggaaacggtttattcagcttacactgcc
acattgctgttcatcgtcaaaggaagtcaggactggaactcaggcaagtc
aggaagcaggagctgatgcagaggccgtggagggtgctgcttactggctt
gctttccctggctcgctcagttcgactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059197_41059737
seq2: B6Ng01-059N14.b_45_585 (reverse)

seq1  AATAGAATTGAAGACTCAGAAACGAATCCACACACCTATGGTCACTTGAT  50
      ||||||||||||||| |||||| ||| |||||||||||||||||||||||
seq2  AATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGAT  50

seq1  CTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCA  100
      ||| ||||||||||| |||||||||||||||||||| |||||||| ||||
seq2  CTTTGACAAGGGAGCAAAAACCATCCAGTGGAAAAAGGACAGCATCTTCA  100

seq1  ACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATT  150
      |||||||||||||||||| ||||  |||||||||||||||||||| ||||
seq2  ACAAATGGTGCTGGCACACCTGGCGGTTATCATGTAGAAGAATGCAAATT  150

seq1  GATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGA  200
      | |||| ||||||||||||||||||||||||||||||||||||| |||||
seq2  GGTCCATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGA  200

seq1  ACGCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGA  250
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTAGGGA  250

seq1  AAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCA  300
      ||| ||| ||||||||||  |||||||||||||||||| |||||||||||
seq2  AAACCCTCGAAGATATGGGTACAGGGGAAAAATTCCTGAATAGAACAGCA  300

seq1  ATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATGAAACT  350
      ||| |||||||||||||||  |||||  |||||||||||||||| ||| |
seq2  ATGACTTGTGCTGTAAGATCCAGAATCCACAAATGGGACCTCATAAAATT  350

seq1  GCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGG-CAC  399
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGGCCAC  400

seq1  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  449
      ||||| |||||||||||||||||||| |||||||||||||||||||||||
seq2  CAACAAATTGGGAAAGGATCTTTACCAATCCTAAATCAGATAGGGGACTA  450

seq1  ATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAA  499
      ||||||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  ATATCCAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAA  500

seq1  TAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  541
      |||||||||| |||| ||||||||||||||||||||||||||
seq2  TAACCCCATT-AAAATTGGGGCTCAGAGCTAAACAAAGAATT  541

seq1: chr10_114981306_114981839
seq2: B6Ng01-059N14.g_67_600

seq1  GAATTCCTGATCCCTGTTATAAATATAATGTGGTTCTTGTATCAGCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCCCTGTTATAAATATAATGTGGTTCTTGTATCAGCAGAG  50

seq1  TGGCAGCTGGCGTGTATACAGGTGCATATGATGTGAGTAGAGCTTCTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCTGGCGTGTATACAGGTGCATATGATGTGAGTAGAGCTTCTAAG  100

seq1  GGGAGAGGGATCCAATCTTAAAATCAATAGGGATGTATTCTGGGATTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGGATCCAATCTTAAAATCAATAGGGATGTATTCTGGGATTGTT  150

seq1  TGTGTAACTTTACACACGCACACGAATAAAAGAGGTTTTTAAAAAGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAACTTTACACACGCACACGAATAAAAGAGGTTTTTAAAAAGTAGA  200

seq1  TTTGATCCACATCACCCTACTACCTCCTAGGGTTTCCATTGGGGCCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCCACATCACCCTACTACCTCCTAGGGTTTCCATTGGGGCCTGGG  250

seq1  TGCTGAAATCTATCTATTTTATGATGAGAGGCAAATGGAGAACATATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAATCTATCTATTTTATGATGAGAGGCAAATGGAGAACATATTTG  300

seq1  AGAATGAGACCAGGGTGTCTGTCTTAGTCAGGGTTTTACTCCTGCACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGACCAGGGTGTCTGTCTTAGTCAGGGTTTTACTCCTGCACAAA  350

seq1  ACATCATGACTAAAAAGCAAGTTGGGGAGGAAACGGTTTATTCAGCTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATGACTAAAAAGCAAGTTGGGGAGGAAACGGTTTATTCAGCTTAC  400

seq1  ACTGCCACATTGCTGTTCATCGTCAAAGGAAGTCAGGACTGGAACTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCACATTGCTGTTCATCGTCAAAGGAAGTCAGGACTGGAACTCAGG  450

seq1  CAAGTCAGGAAGCAGGAGCTGATGCAGAGGCCGTGGAGGGTGCTGCTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGGAAGCAGGAGCTGATGCAGAGGCCGTGGAGGGTGCTGCTTAC  500

seq1  TGGCTTGCTTCCCCTGGCTCGCTCAGTTCGACTT  534
      |||||||||| |||||||||||||||||||||||
seq2  TGGCTTGCTTTCCCTGGCTCGCTCAGTTCGACTT  534