BAC Information

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BAC

Clone NameB6Ng01-060G22
Chromosome3 (Build37)
Map Location 91,806,288 - 91,807,181
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668179, LOC635756, 4930529C04Rik, 9130204L05Rik, LOC100042463
Downstream genePglyrp3, EG619750, Lor, A030004J04Rik, Sprr2a, LOC100042999, LOC545543, LOC100043005, LOC545545, LOC100042514, LOC619984, Sprr2b, Sprr2c, Sprr2d, Sprr2e, Sprr2f, Sprr2g, Sprr2h, Sprr2i, Sprr2j, LOC100043022, Sprr2k, Sprr1b, Sprr3, LOC100042575, Sprr1a, Sprr4, LOC100042581, Ivl, Smcp, Lce1a1, Lce1b, LOC620325, Lce1a2, Lce1c, Lce1d, LOC100043062, Lce1e, Lce1f, LOC668264, Lce1g, Lce1h, Lce1i, LOC545547, LOC631101, Kprp, Lce1l, 2310050C09Rik, Lce3a, Lce3b, Lce3c, LOC630994, 2310001H18Rik, Lce3f
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060G22.bB6Ng01-060G22.g
ACCDH881406DH881407
length1,247884
definitionDH881406|Mus musculus domesticus DNA, BAC clone: B6Ng01-060G22, 5' end.DH881407|Mus musculus domesticus DNA, BAC clone: B6Ng01-060G22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgatcaataccaaatgcctgagaagcacctgaaataaat
gttcaacatccttaatcatcagggaaatgcaaataaaaagaacactgaga
ttccaactcacacctgtcagaatggctaagacaaaaattcagttgacagc
agactctgtctaggatattgagagaggggatctctcctcaattgttggtg
gcattgcaagcttgtacaaccactctggaaatctttctggtggttactca
gaacattggacatagtactactggaggatctagcaatacatctcctgggc
ttatatccaaaagatgttccaactttaataaggacacatgcttcactatg
ttcatagcagccttatttataatagcctgaagctagaaagaacccacatg
tccctcaacacaggaatggaaacagaaaatgtggtacacttacacaatgg
agtactactcagcaattaaaaacaatgaatttaggaagttcttaggcaaa
tggatggatctataggatatcatccggagtgatgtaacccaatcacaaag
gaactcacatgatacgcattcactgacaagtcaatatttgcccagaaaca
gaatacccaagatacaatttgtaaaacatgtgaaactcaaggagaaggaa
gaccaaggtgtggatacttcgtccctccttagaatggggaacaaaataca
gatgtaaggaattacagagataatgttgggagctgagaagaaaggatgga
ccacccagagactgccccacctggcgatccatcccatagtcagccaccaa
tctcacacattcttgcatatgacagcaaggttttgctgaaaggaccctga
tatagctgtctctagtaagactatgccagtgccttgcaaatactaagtgg
gtgctcagagtcatctattggatggaacacaggcctctaatagaggaact
acagaaagtactcaaggagctgaagtgtctgcacactatatgtgggacaa
caatatgactaaccactacccccagagctcctgatctagctgctatgtag
tagagacgtcttagtgccacatggaagaaagtcccttgtctagaaactca
tgtaccagtcatgaagccaagtcaagatggatgtttggttaggaacggca
gtgtagctatggacttcgattcctaaatatgaagactccagacttgcagg
cacagaatttcattatctggaataagagagatgtctaccgttatgtc
gaattcttatagaattgtcactagaaattaagaaatcatacatttgtgta
tatagcatcactacaagtcactgcatcttccttgagctgacttaaagggt
gggataatacctagtgattgtcattcatatatatatatatatatatatat
atatatatatacatatatatatatatatatatatatatatgaatatggaa
aggcatacacacacacacacacacacacacatatatatatatgaatattg
aaaggcatattagtagccagagtccttcctaaaatgttgtcccttcagac
ttgcctagaaggattcatccattgggcttcacagtccatgatgaaactat
ctgggggggggtgggcggggggattttaacctctcctagataactcttga
caactttgtagtatttgggccctagtcttcttttgattgataaatgtttt
agcatcacatgtgctttcctccagtagtgtcttgatatgtttatctttct
catagaatgaaatattttttccagtgtcctctgtatccctggttagtgaa
aatatagtttctttatcctgcctttttctgcttctaccttcaattatgac
agttttttgggggggttggcaattgtgaccctacaaagaatgaaagacat
cagtctactccgttactgctttcctggttagattgaaaatttgacactgt
tttaattggccaaactttttgtgtgactgggccttttctttttcagcttt
caaaatacttcattttattctgtacatttgggttatttagctagaatatg
atgtgtgcgtttctctctggtctgtctatttggtgttctgtgtatctctt
atattgagaacttagttcttagtttgggaacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_91806288_91807181
seq2: B6Ng01-060G22.g_68_951 (reverse)

seq1  AAAGTTCCCAAATCTAGGGAAACAAAAGTTTCTCAAATATAAGAGATACA  50
      |||||||||||| ||| |  ||| ||   ||||| |||||||||||||||
seq2  AAAGTTCCCAAA-CTAAG--AACTAA--GTTCTC-AATATAAGAGATACA  44

seq1  CAGAACACCAAATAGACAGGACCAGAGAAGAAACGCACACATCATATTCT  100
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  CAGAACACCAAATAGACA-GACCAGAG-AGAAACGCACACATCATATTCT  92

seq1  AGCTAAATAA-CCAAATGTACAGAATTAAAATGAAGTATTTTGAAAGCTG  149
      |||||||||| |||||||||||||| ||||||||||||||||||||||||
seq2  AGCTAAATAACCCAAATGTACAGAA-TAAAATGAAGTATTTTGAAAGCTG  141

seq1  AAAAAGAAAAGGACCAAGTCACACAAAAAGTTTGGCCAATTAAAACAGTT  199
      |||||||||||| || |||||||||||||||||||||||||||||||| |
seq2  AAAAAGAAAAGG-CCCAGTCACACAAAAAGTTTGGCCAATTAAAACAG-T  189

seq1  GTCAAATTTTCAATCTAACCAGGAAAGCAGTAACGGAGTAGACTGATGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATTTTCAATCTAACCAGGAAAGCAGTAACGGAGTAGACTGATGTC  239

seq1  TTTCATTCTTTGAAGGGTCACAATTGCCAACCCCCCCAAAAAACTGTCAT  299
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTCATTCTTTGTAGGGTCACAATTGCCAACCCCCCCAAAAAACTGTCAT  289

seq1  AATTGAAGGTAGAAGCAGAAAAAGGCAGGATAAAGAAACTATATTTTCAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAGGTAGAAGCAGAAAAAGGCAGGATAAAGAAACTATATTTTCAC  339

seq1  TAACCAGGGATACAGAGGACACTGGAAAAAATATTTCATTCTATGAGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGGGATACAGAGGACACTGGAAAAAATATTTCATTCTATGAGAAA  389

seq1  GATAAACATATCAAGACACTACTGGAGGAAAGCACATGTGATGCTAAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACATATCAAGACACTACTGGAGGAAAGCACATGTGATGCTAAAAC  439

seq1  ATTTATCAATCAAAAGAAGACTAGGGCCCAAATACTACAAAGTTGTCAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAATCAAAAGAAGACTAGGGCCCAAATACTACAAAGTTGTCAAG  489

seq1  AGTTATCTAGGAGAGGTTAAAATCTAGCAGGTGATCTTTCCTGAGATAGT  549
      ||||||||||||||||||||||||   | |   | |   ||  |||||||
seq2  AGTTATCTAGGAGAGGTTAAAATCCCCCCGCCCACCCCCCCCCAGATAGT  539

seq1  TTCATCATGGACTGTGAAGCACAATGGATGAATCCTTCTAGGCAAGTCTG  599
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTCATCATGGACTGTGAAGCCCAATGGATGAATCCTTCTAGGCAAGTCTG  589

seq1  AAGGGACAACATTTTAGGAAGGACTCTGGCTACTAATATGCCTTTCAATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACAACATTTTAGGAAGGACTCTGGCTACTAATATGCCTTTCAATA  639

seq1  TTCATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATGCCTTTCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATGCCTTTCCA  689

seq1  TATTCATATATATATATATATATATATATATATGTATATATATATATATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATATATATATATATATATATATATATGTATATATATATATATA  739

seq1  TATATATATATATATATATGAATGACAATCACTAGGTATTATCCCACCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATGAATGACAATCACTAGGTATTATCCCACCCT  789

seq1  TTAAGTCAGCTCAAGGAAGATGCAGTGACTTGTAGTGATGCTATATACAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCAGCTCAAGGAAGATGCAGTGACTTGTAGTGATGCTATATACAC  839

seq1  AAATGTATGATTTCTTAATTTCTAGTGACAATTCTATAAGAATTC  894
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATGATTTCTTAATTTCTAGTGACAATTCTATAAGAATTC  884