BAC Information

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BAC

Clone NameB6Ng01-060H08
Chromosome3 (Build37)
Map Location 53,132,249 - 53,133,235
singlet/doubletsinglet
Overlap genenone
Upstream geneFoxo1, LOC100039762, LOC100039832, Cog6, Lhfp, LOC100039808
Downstream geneLOC666413, 8030451K01Rik, 2810046L04Rik, Stoml3, Frem2, Ppia-ps3_416.1, LOC621155, Ufm1, EG666444, LOC100039937, Trpc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060H08.bB6Ng01-060H08.g
ACCDH881426DH881427
length9791,165
definitionDH881426|Mus musculus domesticus DNA, BAC clone: B6Ng01-060H08, 5' end.DH881427|Mus musculus domesticus DNA, BAC clone: B6Ng01-060H08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcctatggcggtaactaataaacgttcatgctgaccgtggtc
caggcaagcaggatcacttgctgatttctcaaacgtgtggagtatttaca
agaagcctcttcactttctcacgcatcctgtttccagtagagcgtcatag
gcagcagtgagaactaacaggaggatgcacactacctcttttcaggatct
cgtatacacatggtttaccctggccccttctgactccagagtatcactgg
cctctctgtgtaaacttgttcatggaaactgagttatccccccttgaact
tctgctcataggtatttctttgacttgccattatgatagctgtccctaaa
acggagtctactgcagtgggcatccaacaaacattggttgaagaaacaaa
tgataaactgtgtagggtactcttctcagatcctttgaaattcagctaag
ataccttcttcctgaagatttttcttgactctctcttgagtctaatcaga
cacaccttgtgtgaaaatcggacacagctctcagaagatcacagggccac
tactggtttgtgtctctcaccctggactatgattgtccatgggtagagtg
tattacaatcacactggctatggcgcctaaagggtgcttgtctcagagga
ggctcccaaagacaagcagtgaaaggaatgtgggtctcagcaatgatctc
cagtttataacgctttagtaaagaagaccctaaaatgccaatctcccagg
ttcttcggcttcacagtgctttctggagtgagtcacagttttggtgctct
ttgccagtcttctggtgcacaccctggccaagggttttgaaaccttcaag
tttgccctacttccaacaatctgcttaattttaagttggcatacaaagca
atgggtttcattatggccttttacatacaatgcacacacatgcatgcaca
cacacaacaccatgcacccatttacatac
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggagagctagagaagtactcaaggagctaaagggatctgcactctata
ggtggagcaacatatgaactaaccagtactcctgagctctgactctagct
gcatatgtacaaaagaatggactagtcgcattaatggaaggagagtcatg
gaactccaacttatgtgtgcctcgttcaggacgctagggtcaaagggggg
agatgtgtgagtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_53132249_53133235
seq2: B6Ng01-060H08.b_44_1022 (reverse)

seq1  GTATGTATATGTGTGTGCATGTGTGTTTGTGTGTGTGCATGCATGTGTGT  50
      ||||||| |  || ||||||| ||| ||||||||||||||||||||||||
seq2  GTATGTAAA--TGGGTGCATG-GTG-TTGTGTGTGTGCATGCATGTGTGT  46

seq1  GCATTTGTATGTAAAAAGGCCATAATGAAACCCATTGCTTTGTATGCCAA  100
      ||| |||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCA-TTGTATGT-AAAAGGCCATAATGAAACCCATTGCTTTGTATGCCAA  94

seq1  CTTAAAAATTAAGCAGATTGTTGGAAGTAGGGCAAAACTTGAAGGTTTCA  150
      ||| ||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTT-AAAATTAAGCAGATTGTTGGAAGTAGGGC-AAACTTGAAGGTTTCA  142

seq1  AAACCCTTGGCCAGGGTGTGCACCAGAAGACTGGCAAAGAGCACCAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTGGCCAGGGTGTGCACCAGAAGACTGGCAAAGAGCACCAAAAC  192

seq1  TGTGACTCACTCCAGAAAGCACTGTGAAGCCGAAGAACCTGGGAGATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTCACTCCAGAAAGCACTGTGAAGCCGAAGAACCTGGGAGATTGG  242

seq1  CATTTTAGGGTCTTCTTTACTAAAGCGTTATAAACTGGAGATCATTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGGGTCTTCTTTACTAAAGCGTTATAAACTGGAGATCATTGCTG  292

seq1  AGACCCACATTCCTTTCACTGCTTGTCTTTGGGAGCCTCCTCTGAGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCACATTCCTTTCACTGCTTGTCTTTGGGAGCCTCCTCTGAGACAA  342

seq1  GCACCCTTTAGGCGCCATAGCCAGTGTGATTGTAATACACTCTACCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCTTTAGGCGCCATAGCCAGTGTGATTGTAATACACTCTACCCATG  392

seq1  GACAATCATAGTCCAGGGTGAGAGACACAAACCAGTAGTGGCCCTGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATCATAGTCCAGGGTGAGAGACACAAACCAGTAGTGGCCCTGTGAT  442

seq1  CTTCTGAGAGCTGTGTCCGATTTTCACACAAGGTGTGTCTGATTAGACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGAGCTGTGTCCGATTTTCACACAAGGTGTGTCTGATTAGACTC  492

seq1  AAGAGAGAGTCAAGAAAAATCTTCAGGAAGAAGGTATCTTAGCTGAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAGTCAAGAAAAATCTTCAGGAAGAAGGTATCTTAGCTGAATTT  542

seq1  CAAAGGATCTGAGAAGAGTACCCTACACAGTTTATCATTTGTTTCTTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATCTGAGAAGAGTACCCTACACAGTTTATCATTTGTTTCTTCAA  592

seq1  CCAATGTTTGTTGGATGCCCACTGCAGTAGACTCCGTTTTAGGGACAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTTGTTGGATGCCCACTGCAGTAGACTCCGTTTTAGGGACAGCT  642

seq1  ATCATAATGGCAAGTCAAAGAAATACCTATGAGCAGAAGTTCAAGGGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATGGCAAGTCAAAGAAATACCTATGAGCAGAAGTTCAAGGGGGG  692

seq1  ATAACTCAGTTTCCATGAACAAGTTTACACAGAGAGGCCAGTGATACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCAGTTTCCATGAACAAGTTTACACAGAGAGGCCAGTGATACTCT  742

seq1  GGAGTCAGAAGGGGCCAGGGTAAACCATGTGTATACGAGATCCTGAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCAGAAGGGGCCAGGGTAAACCATGTGTATACGAGATCCTGAAAAG  792

seq1  AGGTAGTGTGCATCCTCCTGTTAGTTCTCACTGCTGCCTATGACGCTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTGTGCATCCTCCTGTTAGTTCTCACTGCTGCCTATGACGCTCTA  842

seq1  CTGGAAACAGGATGCGTGAGAAAGTGAAGAGGCTTCTTGTAAATACTCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAACAGGATGCGTGAGAAAGTGAAGAGGCTTCTTGTAAATACTCCA  892

seq1  CACGTTTGAGAAATCAGCAAGTGATCCTGCTTGCCTGGACCACGGTCAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTTGAGAAATCAGCAAGTGATCCTGCTTGCCTGGACCACGGTCAGC  942

seq1  ATGAACGTTTATTAGTTACCGCCATAGGAAAGAATTC  987
      |||||||||||||||||||||||||||||||||||||
seq2  ATGAACGTTTATTAGTTACCGCCATAGGAAAGAATTC  979