BAC Information

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BAC

Clone NameB6Ng01-060L13
Chromosome3 (Build37)
Map Location 84,388,764 - 84,561,885
singlet/doubletdoublet
Overlap geneArfip1, EG627369, Tigd4, Tmem154
Upstream geneLOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, EG667788
Downstream geneLOC624889, Fbxw7, Dear1, LOC100042237, LOC100042125, Pet112l, 9930021J17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060L13.bB6Ng01-060L13.g
ACCDH881617DH881618
length785864
definitionDH881617|Mus musculus domesticus DNA, BAC clone: B6Ng01-060L13, 5' end.DH881618|Mus musculus domesticus DNA, BAC clone: B6Ng01-060L13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,388,764 - 84,389,548)(84,561,029 - 84,561,885)
sequence
gaattctgataatgtgtcaaaatttccagcactcttcatcagtaggtttc
tcttcatggacagatattgaggttactaatcacagtgtaatcttcagtaa
acaaagatattaagttcccagatgagccagttggtggcacatgcctttaa
tcccaggcaaccagaccttcgttcgagaccagctatagaattccaggata
gctggagctacacttagaaaccctgtctccaaaaacaacaactgcaaaac
aaaaacaaacaaacaaaacaaaacaaaaaagagcagccagtgcttttcaa
gccagtcctgtccctcatctgggcaaagtgagaaagctggccctggtggt
gtgggctcaggagagctggcagactgacaacccagccactcagctacaga
tccagggctttgagttggcccacctcaacatctactccatctatgaatta
ttggactttgtgaaagggctggccctgcagattcaaagctgcaggatctc
catgacacagggcaacaacaggatatctaagaggagtcctgggagagggc
gagatccagtattgatagagtagctgaagccagaggcctctaaccagatt
aatgactcattgtaatgaatatttgccaggaaagttgtttgggcagaagg
gtaaacaccgtggcatacctcagcttccattttagagttttgttttgttt
tgttttgttttgtttgtgggggaggctgcaagtgtggagggcagatggag
gtacagggagatgagtgggattggagtgcctgatt
gaattctaagcagaaagggtttattttggctcatggtttcaggtgctttg
gtccatgggcagttggtcattgctttttgaccctgtgttgaggcagaaca
tattgtggaggaaaactgcttaccctgtggtgaccagaaaggagaggggg
gaaaagaggaagtctaggaagggatgaaaagagaaagtaaaaaatgaatg
agagaataaggagcttgggtcccaatatcccctttacagacatattccca
atgacctaacttcctctcgctaggcccactttctacatgcactacagact
ggtgaccaagcctttagaacagggatgcatttaagacctaaactgtaaca
atttcttttagaaacaaatgctagggaagcactataaccactctaatttt
taaaaagctatgcatatatcctaactctcacaagacttcttcagttttct
tgctacctcctacaccaatggttcaaatatagtcgtagttatagtgtaca
tacattctgtacagaaatatttaacagtaaataaatccacccactaggac
aaaaacatgggctcttccctccccgattattgaaatgcattacatgtgtt
gccaagcccttcctattataagtgctgcacgagagcttttagcttttatt
gtctttttccattagtaagggattattttttggggggtgggattagacat
tttgcttggctttgggggctggtggctctcatgggaacccttttcacata
gacttaactttatacacaactgggccaaagtgtctactttagccagtgtt
ctatttgctgtgaagagacttctatgaccacagcacctctattataggta
ttacctggggcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_84388764_84389548
seq2: B6Ng01-060L13.b_47_831

seq1  GAATTCTGATAATGTGTCAAAATTTCCAGCACTCTTCATCAGTAGGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATAATGTGTCAAAATTTCCAGCACTCTTCATCAGTAGGTTTC  50

seq1  TCTTCATGGACAGATATTGAGGTTACTAATCACAGTGTAATCTTCAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGGACAGATATTGAGGTTACTAATCACAGTGTAATCTTCAGTAA  100

seq1  ACAAAGATATTAAGTTCCCAGATGAGCCAGTTGGTGGCACATGCCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGATATTAAGTTCCCAGATGAGCCAGTTGGTGGCACATGCCTTTAA  150

seq1  TCCCAGGCAACCAGACCTTCGTTCGAGACCAGCTATAGAATTCCAGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCAACCAGACCTTCGTTCGAGACCAGCTATAGAATTCCAGGATA  200

seq1  GCTGGAGCTACACTTAGAAACCCTGTCTCCAAAAACAACAACTGCAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGCTACACTTAGAAACCCTGTCTCCAAAAACAACAACTGCAAAAC  250

seq1  AAAAACAAACAAACAAAACAAAACAAAAAAGAGCAGCCAGTGCTTTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACAAACAAAACAAAACAAAAAAGAGCAGCCAGTGCTTTTCAA  300

seq1  GCCAGTCCTGTCCCTCATCTGGGCAAAGTGAGAAAGCTGGCCCTGGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCCTGTCCCTCATCTGGGCAAAGTGAGAAAGCTGGCCCTGGTGGT  350

seq1  GTGGGCTCAGGAGAGCTGGCAGACTGACAACCCAGCCACTCAGCTACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTCAGGAGAGCTGGCAGACTGACAACCCAGCCACTCAGCTACAGA  400

seq1  TCCAGGGCTTTGAGTTGGCCCACCTCAACATCTACTCCATCTATGAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGCTTTGAGTTGGCCCACCTCAACATCTACTCCATCTATGAATTA  450

seq1  TTGGACTTTGTGAAAGGGCTGGCCCTGCAGATTCAAAGCTGCAGGATCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTTTGTGAAAGGGCTGGCCCTGCAGATTCAAAGCTGCAGGATCTC  500

seq1  CATGACACAGGGCAACAACAGGATATCTAAGAGGAGTCCTGGGAGAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACACAGGGCAACAACAGGATATCTAAGAGGAGTCCTGGGAGAGGGC  550

seq1  GAGATCCAGTATTGATAGAGTAGCTGAAGCCAGAGGCCTCTAACCAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCAGTATTGATAGAGTAGCTGAAGCCAGAGGCCTCTAACCAGATT  600

seq1  AATGACTCATTGTAATGAATATTTGCCAGGAAAGTTGTTTGGGCAGAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCATTGTAATGAATATTTGCCAGGAAAGTTGTTTGGGCAGAAGG  650

seq1  GTAAACACCGTGGCATACCTCAGCTTCCATTTTAGAGTTTTGTTTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACACCGTGGCATACCTCAGCTTCCATTTTAGAGTTTTGTTTTGTTT  700

seq1  TGTTTTGTTTTGTTTGTGGGGGAGGCTGCAAGTGTGGAGGGCAGATGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTGTTTGTGGGGGAGGCTGCAAGTGTGGAGGGCAGATGGAG  750

seq1  GTACAGGGAGATGAGTGGGATTGGAGTGCCTGATT  785
      |||||||||||||||||||||||||||||||||||
seq2  GTACAGGGAGATGAGTGGGATTGGAGTGCCTGATT  785

seq1: chr3_84561029_84561885
seq2: B6Ng01-060L13.g_67_930 (reverse)

seq1  CAAGCCCCAGTTAAATCCT-TTATAGAGTTGCTGTGGTCAT-GATGTCTC  48
      |||||||||| |||  ||| | |||||| |||||||||||| || |||||
seq2  CAAGCCCCAGGTAATACCTATAATAGAGGTGCTGTGGTCATAGAAGTCTC  50

seq1  TTCACAGC-AATAGAACACTGGCTAATGTAGACACTTTGGCCCAGTTGTG  97
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  TTCACAGCAAATAGAACACTGGCTAAAGTAGACACTTTGGCCCAGTTGTG  100

seq1  TATAAAGTTAAGTCTATGTGAAAAGGCT--CCATGAGAGCCACCAG-CCC  144
      |||||||||||||||||||||||||| |  |||||||||||||||| |||
seq2  TATAAAGTTAAGTCTATGTGAAAAGGGTTCCCATGAGAGCCACCAGCCCC  150

seq1  CAAAGCCAAGCAAAATGTCTAATCCCACCCCCC-AAAAATAATCCCTTAC  193
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAAAGCCAAGCAAAATGTCTAATCCCACCCCCCAAAAAATAATCCCTTAC  200

seq1  TAATGGAAAAAGACAATAAAAGCTAAAAGCTCTCGTGCAGCACTTATAAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGAAAAAGACAATAAAAGCTAAAAGCTCTCGTGCAGCACTTATAAT  250

seq1  AGGAAGGGCTTGGCAACACATGTAATGCATTTCAATAATCGGGGAGGGAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGCTTGGCAACACATGTAATGCATTTCAATAATCGGGGAGGGAA  300

seq1  GAGCCCATGTTTTTGTCCTAGTGGGTGGATTTATTTACTGTTAAATATTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCATGTTTTTGTCCTAGTGGGTGGATTTATTTACTGTTAAATATTT  350

seq1  CTGTACAGAATGTATGTACACTATAACTACGACTATATTTGAACCATTGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACAGAATGTATGTACACTATAACTACGACTATATTTGAACCATTGG  400

seq1  TGTAGGAGGTAGCAAGAAAACTGAAGAAGTCTTGTGAGAGTTAGGATATA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAGGTAGCAAGAAAACTGAAGAAGTCTTGTGAGAGTTAGGATATA  450

seq1  TGCATAGCTTTTTAAAAATTAGAGTGGTTATAGTGCTTCCCTAGCATTTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGCTTTTTAAAAATTAGAGTGGTTATAGTGCTTCCCTAGCATTTG  500

seq1  TTTCTAAAAGAAATTGTTACAGTTTAGGTCTTAAATGCATCCCTGTTCTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAAGAAATTGTTACAGTTTAGGTCTTAAATGCATCCCTGTTCTA  550

seq1  AAGGCTTGGTCACCAGTCTGTAGTGCATGTAGAAAGTGGGCCTAGCGAGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTGGTCACCAGTCTGTAGTGCATGTAGAAAGTGGGCCTAGCGAGA  600

seq1  GGAAGTTAGGTCATTGGGAATATGTCTGTAAAGGGGATATTGGGACCCAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTAGGTCATTGGGAATATGTCTGTAAAGGGGATATTGGGACCCAA  650

seq1  GCTCCTTATTCTCTCATTCATTTTTTACTTTCTCTTTTCATCCCTTCCTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTATTCTCTCATTCATTTTTTACTTTCTCTTTTCATCCCTTCCTA  700

seq1  GACTTCCTCTTTTCCCCCCTCTCCTTTCTGGTCACCACAGGGTAAGCAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCTCTTTTCCCCCCTCTCCTTTCTGGTCACCACAGGGTAAGCAGT  750

seq1  TTTCCTCCACAATATGTTCTGCCTCAACACAGGGTCAAAAAGCAATGACC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCACAATATGTTCTGCCTCAACACAGGGTCAAAAAGCAATGACC  800

seq1  AACTGCCCATGGACCAAAGCACCTGAAACCATGAGCCAAAATAAACCCTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCCATGGACCAAAGCACCTGAAACCATGAGCCAAAATAAACCCTT  850

seq1  TCTGCTTAGAATTC  857
      ||||||||||||||
seq2  TCTGCTTAGAATTC  864