BAC Information

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BAC

Clone NameB6Ng01-061O16
Chromosome3 (Build37)
Map Location 84,360,548 - 84,484,384
singlet/doubletdoublet
Overlap geneArfip1, EG627369, Tigd4, Tmem154
Upstream gene1700028M03Rik, LOC100042007, LOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, EG667788
Downstream geneLOC624889, Fbxw7, Dear1, LOC100042237, LOC100042125, Pet112l, 9930021J17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061O16.bB6Ng01-061O16.g
ACCDH882466DH882467
length1,119816
definitionDH882466|Mus musculus domesticus DNA, BAC clone: B6Ng01-061O16, 5' end.DH882467|Mus musculus domesticus DNA, BAC clone: B6Ng01-061O16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,360,548 - 84,361,680)(84,483,568 - 84,484,384)
sequence
gaattcacagagagagacctcagagtctggcctgcctcttcggggattaa
aggcatgcactaccactgcccagcaagcactgtaattttaacctaaagct
ctcctgttccctagactcttgtcctctccaatctatacaacgaagcccag
agcaaacaggaagaggctccatactggctcctcccactccctccactgcc
tcaggacaacagcttcccccatcaggtatcccctcagcattcgttccctc
tggcagcaagttttccactcttcactggaccactgttagagagttgcagg
ttataaatccaagaccactgtacttttcacatctgtcacttcctcctctg
cagctgtcataaccacagccccccaccccgactgccatatcccacttctc
caccatcctccataatcaggagaacctacaaaatggtaccttcaggtgta
cctccatatccattatagccatccccacagctatggacacttctatagct
atcatattctgcattccccacaagcacatacacattgcttcctggtcttg
gcccaaaattgcctcagccaccacaaaactccccaaacctccactccatt
cctaaaactcgagactcctgcatttcttgcctagataatgcttttctcac
ttttgctttatgatcactgatggaataatactttgcaatacaatttaatc
acagaatcacagtcataaatgtagcaaaatcaaggcccctcttcttcctt
ccagactgctatcaggaattatttcaccatcaattttcccacattctcca
atgtaatctgtaaggcggtgttcctcaggatcttccctaaccctaccaaa
cagcttcttcagttacaagacatgcaggttttcagcctcctctcttaata
tgaaatgtctgactcaactactctcccacctatgacatgcggctttgcag
tcaaagcagcatcatcctcagccaagatgagaagctacataatcaaacca
tatcaccttgtgctcgcaacgctctcagaatcgtctgggagctttcctcg
ctgcttcaagtcgctctacctcctgtggttcaaccaataagagtatagaa
cgattctttctgctctctc
gaattccaggacccaggatggcaagaactacacagagaaaccctgactta
agaaaaaaaaaatagttagaaaaccggaagcaagaaaaccaaggtgggac
tcagactcagcacaagaaccagaggtgctaaagtggtggtggatggagct
agcagaaggcagctcagggactttcccccaaagctcccacacacaccccg
ccactgagttaaagcagcttttaacccaatggaagtcggggagcccctaa
accgccgctcagcctcaggcaaccccatgggctctagcacttgcctttgc
tttgtgaagaacggcaataactggtgccatgtcacacagcactagagtct
agcacctagcaccctggccataaaacagatctccagaaaatgagcgctac
ctaggttaagtaagctccacggggctttcaggttttcttcttttgcctca
gacaccctacatatccactccttccccgactccatgttcataacgaagga
accctggaagagcccttcccattttagaacttgttccctaaaagtgctcc
ggaaggcaggtgagtgggtaagtgccgtgccttctcagcctggggcacag
acaccagggcggcatacctgatgtcaactttgttcgtctacctatcttct
ttcctggtgtgcttcttggttgtccctcgggagttccgcccacctgctat
aacttcctcatttattctcatatttcggggctaacaatttggatattatt
caggacatgagtggtggggatggggataaaattggcagagctgagggtgg
gtgaggatatagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_84360548_84361680
seq2: B6Ng01-061O16.b_48_1166

seq1  GAATTCACAGAGAGAGACCTCAGAGTCTGGCCTGCCTCTTCGGGGATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAGAGAGACCTCAGAGTCTGGCCTGCCTCTTCGGGGATTAA  50

seq1  AGGCATGCACTACCACTGCCCAGCAAGCACTGTAATTTTAACCTAAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGCACTACCACTGCCCAGCAAGCACTGTAATTTTAACCTAAAGCT  100

seq1  CTCCTGTTCCCTAGACTCTTGTCCTCTCCAATCTATACAACGAAGCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTTCCCTAGACTCTTGTCCTCTCCAATCTATACAACGAAGCCCAG  150

seq1  AGCAAACAGGAAGAGGCTCCATACTGGCTCCTCCCACTCCCTCCACTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACAGGAAGAGGCTCCATACTGGCTCCTCCCACTCCCTCCACTGCC  200

seq1  TCAGGACAACAGCTTCCCCCATCAGGTATCCCCTCAGCATTCGTTCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACAACAGCTTCCCCCATCAGGTATCCCCTCAGCATTCGTTCCCTC  250

seq1  TGGCAGCAAGTTTTCCACTCTTCACTGGACCACTGTTAGAGAGTTGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCAAGTTTTCCACTCTTCACTGGACCACTGTTAGAGAGTTGCAGG  300

seq1  TTATAAATCCAAGACCACTGTACTTTTCACATCTGTCACTTCCTCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATCCAAGACCACTGTACTTTTCACATCTGTCACTTCCTCCTCTG  350

seq1  CAGCTGTCATAACCACAGCCCCCCACCCCGACTGCCATATCCCACTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTCATAACCACAGCCCCCCACCCCGACTGCCATATCCCACTTCTC  400

seq1  CACCATCCTCCATAATCAGGAGAACCTACAAAATGGTACCTTCAGGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCCTCCATAATCAGGAGAACCTACAAAATGGTACCTTCAGGTGTA  450

seq1  CCTCCATATCCATTATAGCCATCCCCACAGCTATGGACACTTCTATAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATATCCATTATAGCCATCCCCACAGCTATGGACACTTCTATAGCT  500

seq1  ATCATATTCTGCATTCCCCACAAGCACATACACATTGCTTCCTGGTCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTCTGCATTCCCCACAAGCACATACACATTGCTTCCTGGTCTTG  550

seq1  GCCCAAAATTGCCTCAGCCACCACAAAACTCCCCAAACCTCCACTCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAATTGCCTCAGCCACCACAAAACTCCCCAAACCTCCACTCCATT  600

seq1  CCTAAAACTCGAGACTCCTGCATTTCTTGCCTAGATAATGCTTTTCTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAACTCGAGACTCCTGCATTTCTTGCCTAGATAATGCTTTTCTCAC  650

seq1  TTTTGCTTTATGATCACTGATGGAATAATACTTTGCAATACAATTTAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTATGATCACTGATGGAATAATACTTTGCAATACAATTTAATC  700

seq1  ACAGAATCACAGTCATAAATGTAGCAAAATCAAGGCCCCTCTTCTTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATCACAGTCATAAATGTAGCAAAATCAAGGCCCCTCTTCTTCCTT  750

seq1  CCAGACTGCTATCAGGAATTATTTCACCATCAATTTTCCCACATTCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTGCTATCAGGAATTATTTCACCATCAATTTTCCCACATTCTCCA  800

seq1  ATGTAATCTGTAAGGCGGTGTTCCTCAGGATCTTCCCTAACCCTACCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATCTGTAAGGCGGTGTTCCTCAGGATCTTCCCTAACCCTACCAAA  850

seq1  CAGCTTCTTCAGTTACAAGACATGCAGGTTTTCCAGCCTCCTCTCTTAAT  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGCTTCTTCAGTTACAAGACATGCAGGTTTT-CAGCCTCCTCTCTTAAT  899

seq1  ATGAAATGTCTGACTCAACTACTCTCCCACCTATGACATGCGGCTTTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGTCTGACTCAACTACTCTCCCACCTATGACATGCGGCTTTGCA  949

seq1  GTCAAGGCAGCATCACCCTCAGCCAAGGATGAGAAGCTACAT-ATCAAAC  999
      ||||| ||||||||| |||||||||| ||||||||||||||| |||||||
seq2  GTCAAAGCAGCATCATCCTCAGCCAA-GATGAGAAGCTACATAATCAAAC  998

seq1  CATATCACCTTGTGCTCGCAACGC-CTCAGAACCGGTCTGTGAGCTTTCC  1048
      |||||||||||||||||||||||| ||||||| | ||||| |||||||||
seq2  CATATCACCTTGTGCTCGCAACGCTCTCAGAATC-GTCTGGGAGCTTTCC  1047

seq1  CCGCTGCTCCAAGTCGCTTCTTAAACCTCCTGTGGTTTCAAACCAATAAA  1098
       ||||||| |||||||| |||   |||||||||||||   ||||||| ||
seq2  TCGCTGCTTCAAGTCGC-TCT---ACCTCCTGTGGTT--CAACCAAT-AA  1090

seq1  GAGTTTATAGAACGATTCCTTTTCTGCTTCCTCTC  1133
      |||  |||||||||||||  ||||||||  |||||
seq2  GAG--TATAGAACGATTC--TTTCTGCT--CTCTC  1119

seq1: chr3_84483568_84484384
seq2: B6Ng01-061O16.g_68_883 (reverse)

seq1  CCCACTGTATCCTCACCCCACCCTCAGCTCTGCCAATTTTATCCCCATCC  50
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCACTATATCCTCA-CCCACCCTCAGCTCTGCCAATTTTATCCCCATCC  49

seq1  CCACCACTCATGTCCTGAATAATATCCAAATTGTTAGCCCCGAAATATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACTCATGTCCTGAATAATATCCAAATTGTTAGCCCCGAAATATGA  99

seq1  GAATAAATGAGGAAGTTATAGCAGGTGGGCGGAACTCCCGAGGGACAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATGAGGAAGTTATAGCAGGTGGGCGGAACTCCCGAGGGACAACC  149

seq1  AAGAAGCACACCAGGAAAGAAGATAGGTAGACGAACAAAGTTGACATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCACACCAGGAAAGAAGATAGGTAGACGAACAAAGTTGACATCAG  199

seq1  GTATGCCGCCCTGGTGTCTGTGCCCCAGGCTGAGAAGGCACGGCACTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCCGCCCTGGTGTCTGTGCCCCAGGCTGAGAAGGCACGGCACTTAC  249

seq1  CCACTCACCTGCCTTCCGGAGCACTTTTAGGGAACAAGTTCTAAAATGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCACCTGCCTTCCGGAGCACTTTTAGGGAACAAGTTCTAAAATGGG  299

seq1  AAGGGCTCTTCCAGGGTTCCTTCGTTATGAACATGGAGTCGGGGAAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTCTTCCAGGGTTCCTTCGTTATGAACATGGAGTCGGGGAAGGAG  349

seq1  TGGATATGTAGGGTGTCTGAGGCAAAAGAAGAAAACCTGAAAGCCCCGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGTAGGGTGTCTGAGGCAAAAGAAGAAAACCTGAAAGCCCCGTG  399

seq1  GAGCTTACTTAACCTAGGTAGCGCTCATTTTCTGGAGATCTGTTTTATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTACTTAACCTAGGTAGCGCTCATTTTCTGGAGATCTGTTTTATGG  449

seq1  CCAGGGTGCTAGGTGCTAGACTCTAGTGCTGTGTGACATGGCACCAGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTGCTAGGTGCTAGACTCTAGTGCTGTGTGACATGGCACCAGTTA  499

seq1  TTGCCGTTCTTCACAAAGCAAAGGCAAGTGCTAGAGCCCATGGGGTTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGTTCTTCACAAAGCAAAGGCAAGTGCTAGAGCCCATGGGGTTGCC  549

seq1  TGAGGCTGAGCGGCGGTTTAGGGGCTCCCCGACTTCCATTGGGTTAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTGAGCGGCGGTTTAGGGGCTCCCCGACTTCCATTGGGTTAAAAG  599

seq1  CTGCTTTAACTCAGTGGCGGGGTGTGTGTGGGAGCTTTGGGGGAAAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTAACTCAGTGGCGGGGTGTGTGTGGGAGCTTTGGGGGAAAGTCC  649

seq1  CTGAGCTGCCTTCTGCTAGCTCCATCCACCACCACTTTAGCACCTCTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTGCCTTCTGCTAGCTCCATCCACCACCACTTTAGCACCTCTGGT  699

seq1  TCTTGTGCTGAGTCTGAGTCCCACCTTGGTTTTCTTGCTTCCGGTTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGCTGAGTCTGAGTCCCACCTTGGTTTTCTTGCTTCCGGTTTTCT  749

seq1  AACTATTTTTTTTTTCTTAAGTCAGGGTTTCTCTGTGTAGTTCTTGCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTTTTTTTTCTTAAGTCAGGGTTTCTCTGTGTAGTTCTTGCCAT  799

seq1  CCTGGGTCCTGGAATTC  817
      |||||||||||||||||
seq2  CCTGGGTCCTGGAATTC  816