BAC Information

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BAC

Clone NameB6Ng01-062B16
Chromosome3 (Build37)
Map Location 104,812,237 - 104,812,693
singlet/doubletsinglet
Overlap geneCttnbp2nl
Upstream geneMagi3, EG433634, LOC668622, Lrig2, Slc16a1, EG624251, 7530404M11Rik, Ppm1j, Rhoc, Mov10, Capza1, St7l, LOC100043572, Wnt2b
Downstream gene4930564D02Rik, 1700095B22Rik, Kcnd3, Ddx20, 6530418L21Rik, Rap1a, EG433637, Adora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062B16.bB6Ng01-062B16.g
ACCDH882602DH882603
length716457
definitionDH882602|Mus musculus domesticus DNA, BAC clone: B6Ng01-062B16, 5' end.DH882603|Mus musculus domesticus DNA, BAC clone: B6Ng01-062B16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattagagaagcagccactaagattaagaacaaaaatgagcatt
aagaataggtgcccttaaactttatatgtcccagtacaggagaacgccag
ggccaaaaaggggaagtgggtgggtaggggagtgggggcgttccacccca
catacgagccggaagcataaagtgtagagcctggggtgccgactgattga
gctaactcaccttatttgctgtgtggtcactgccggcttttttcccggga
aacctgctgtgccgcctgcattattgaatcggccaacgcgccgggagagg
cggcggtttgttgattgggcttcctcttccttcctcactgactcactccc
tgcggtcgttcggttgccggcagcgagatgaattcactcaaaggcaggaa
tacggttattttcagcatcaatcaataacataggaaagacatgtgagcaa
aacgccaggccaacgccaggaaccgaaaaaaagacacgttgcgggcctgg
cgtttaggatccgcccccgtgacgagcatcaccaacatcaacattcacgt
tcaagttggagatgcccaacccgactatgactataccagatcctttcccc
ttggaacctgcatcgtgcgctctgctgtctctagtctccacttacccgga
tactgtatacctgtctgcctttggcagtgtgggaagtgtgtcgcagctct
cgctgtcagtatctca
tatggagctagagttacaggtggttgtgagctgcctgatgtgagtgtgtt
agcaactaaactcggtcctttggaagagcaattagtgctcatccctgcta
agccatctctccaggccccagacaggaaggtttaagaacagtctgaaatg
gaaaacaagcttggggagaggcagtgcttcggtagcaggagtgaaccatc
tcacctcacctgcaggctccaaagagctggaaccttggaaagcaggtgct
gtagggagtctggttcagagtctggattttcaaagactagatgaagaaga
gactcttccttaaactgggtatgaggagcagtatctgcaaccccagggct
tgagaagtaaagtcaaaaggtcatctttagctacccagtgatttaaagca
tgaggagggcagatgcggtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_104812237_104812693
seq2: B6Ng01-062B16.g_67_523

seq1  GAATTCTATGGAGCTAGAGTTACAGGTGGTTGTGAGCTGCCTGATGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGGAGCTAGAGTTACAGGTGGTTGTGAGCTGCCTGATGTGAG  50

seq1  TGTGTTAGCAACTAAACTCGGTCCTTTGGAAGAGCAATTAGTGCTCATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAGCAACTAAACTCGGTCCTTTGGAAGAGCAATTAGTGCTCATCC  100

seq1  CTGCTAAGCCATCTCTCCAGGCCCCAGACAGGAAGGTTTAAGAACAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAGCCATCTCTCCAGGCCCCAGACAGGAAGGTTTAAGAACAGTCT  150

seq1  GAAATGGAAAACAAGCTTGGGGAGAGGCAGTGCTTCGGTAGCAGGAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAAAACAAGCTTGGGGAGAGGCAGTGCTTCGGTAGCAGGAGTGA  200

seq1  ACCATCTCACCTCACCTGCAGGCTCCAAAGAGCTGGAACCTTGGAAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCACCTCACCTGCAGGCTCCAAAGAGCTGGAACCTTGGAAAGCA  250

seq1  GGTGCTGTAGGGAGTCTGGTTCAGAGTCTGGATTTTCAAAGACTAGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGTAGGGAGTCTGGTTCAGAGTCTGGATTTTCAAAGACTAGATGA  300

seq1  AGAAGAGACTCTTCCTTAAACTGGGTATGAGGAGCAGTATCTGCAACCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGACTCTTCCTTAAACTGGGTATGAGGAGCAGTATCTGCAACCCC  350

seq1  AGGGCTTGAGAAGTAAAGTCAAAAGGTCATCTTTAGCTACCCAGTGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTGAGAAGTAAAGTCAAAAGGTCATCTTTAGCTACCCAGTGATTT  400

seq1  AAAGCATGAGGAGGGCAGATGCGGTGGTGTGTGTGTGTGTGTGTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATGAGGAGGGCAGATGCGGTGGTGTGTGTGTGTGTGTGTGTGTGT  450

seq1  GTGTGTG  457
      |||||||
seq2  GTGTGTG  457