BAC Information

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BAC

Clone NameB6Ng01-062M14
Chromosome3 (Build37)
Map Location 84,388,764 - 84,526,054
singlet/doubletdoublet
Overlap geneArfip1, EG627369, Tigd4, Tmem154
Upstream geneLOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, EG667788
Downstream geneLOC624889, Fbxw7, Dear1, LOC100042237, LOC100042125, Pet112l, 9930021J17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062M14.bB6Ng01-062M14.g
ACCDH883076DH883077
length7981,064
definitionDH883076|Mus musculus domesticus DNA, BAC clone: B6Ng01-062M14, 5' end.DH883077|Mus musculus domesticus DNA, BAC clone: B6Ng01-062M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,388,764 - 84,389,561)(84,524,974 - 84,526,054)
sequence
gaattctgataatgtgtcaaaatttccagcactcttcatcagtaggtttc
tcttcatggacagatattgaggttactaatcacagtgtaatcttcagtaa
acaaagatattaagttcccagatgagccagttggtggcacatgcctttaa
tcccaggcaaccagaccttcgttcgagaccagctatagaattccaggata
gctggagctacacttagaaaccctgtctccaaaaacaacaactgcaaaac
aaaaacaaacaaacaaaacaaaacaaaaaagagcagccagtgcttttcaa
gccagtcctgtccctcatctgggcaaagtgagaaagctggccctggtggt
gtgggctcaggagagctggcagactgacaacccagccactcagctacaga
tccagggctttgagttggcccacctcaacatctactccatctatgaatta
ttggactttgtgaaagggctggccctgcagattcaaagctgcaggatctc
catgacacagggcaacaacaggatatctaagaggagtcctgggagagggc
gagatccagtattgatagagtagctgaagccagaggcctctaaccagatt
aatgactcattgtaatgaatatttgccaggaaagttgtttgggcagaagg
gtaaacaccgtggcatacctcagcttccattttagagttttgttttgttt
tgttttgttttgtttgtgggggaggctgcaagtgtggagggcagatggag
gtacagggagatgagtgggattggagtgcctgattcgaaattcacaaa
gaattcttaacagcttacttgccactgaccctgtgtgatagctgtagcta
tcaacctgacagaaacctagcgtcatgaagaacggaccagacagaatggc
ctttgggcttgtctgtgagacattttcttaattgctaattgacataggag
ggtccagcccattatggaaagtactgcccctaggaagttaggtctgggct
ccctaagatggccgctgagtgagccagaacgtaagcaacaatctgtgtgg
ttcttgtctcaagctcctgtcttgaattcctgccttggctgtaatataag
atgaaacaaaccccctagccttggtttctgttacaggatttgtcacagca
acagaaaggacacctaggacacccatctcgcccgatcatagctgctggtc
cacaggcctggacttgagaagacctgtgtcccaacaccaggctgctggaa
gatatcatcctgggcaatttcacatcacaggccactcccaggccagctct
ttcttctctcttagaggcagagcctccaaagtatctctaaaaatagaagc
tgctttcctggaccgatggaattaaaatgatttaagatttctcttggttg
acaggtcctgaagtgtctattagcatatgcaaatgttataaaataatggg
ttactttgattgtatttaccctccctcaccatctcttaccagtaactctt
cctgctcctccaatcaattcaatcctttctggtctcctctatgatcaggt
ctccccctgcccctccagaatctgatgtgggagaaaacatgtaatattta
tctatctaaggctggcttcttttgttcaccatgatgatctccagttccat
ccattctcctgcaacacccgattgttattctttaaggctaaataataata
ccccattgcatacatatgccaggttttatttgcctactcatcagttgagt
ggcactagactattcatgacttgcagtatgaacagtgccacaataacatg
ggcacacagccctctatagtatactgttgactcttttgggtgtgcacaca
gcagcagtatgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_84388764_84389561
seq2: B6Ng01-062M14.b_48_845

seq1  GAATTCTGATAATGTGTCAAAATTTCCAGCACTCTTCATCAGTAGGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATAATGTGTCAAAATTTCCAGCACTCTTCATCAGTAGGTTTC  50

seq1  TCTTCATGGACAGATATTGAGGTTACTAATCACAGTGTAATCTTCAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGGACAGATATTGAGGTTACTAATCACAGTGTAATCTTCAGTAA  100

seq1  ACAAAGATATTAAGTTCCCAGATGAGCCAGTTGGTGGCACATGCCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGATATTAAGTTCCCAGATGAGCCAGTTGGTGGCACATGCCTTTAA  150

seq1  TCCCAGGCAACCAGACCTTCGTTCGAGACCAGCTATAGAATTCCAGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCAACCAGACCTTCGTTCGAGACCAGCTATAGAATTCCAGGATA  200

seq1  GCTGGAGCTACACTTAGAAACCCTGTCTCCAAAAACAACAACTGCAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGCTACACTTAGAAACCCTGTCTCCAAAAACAACAACTGCAAAAC  250

seq1  AAAAACAAACAAACAAAACAAAACAAAAAAGAGCAGCCAGTGCTTTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACAAACAAAACAAAACAAAAAAGAGCAGCCAGTGCTTTTCAA  300

seq1  GCCAGTCCTGTCCCTCATCTGGGCAAAGTGAGAAAGCTGGCCCTGGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCCTGTCCCTCATCTGGGCAAAGTGAGAAAGCTGGCCCTGGTGGT  350

seq1  GTGGGCTCAGGAGAGCTGGCAGACTGACAACCCAGCCACTCAGCTACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTCAGGAGAGCTGGCAGACTGACAACCCAGCCACTCAGCTACAGA  400

seq1  TCCAGGGCTTTGAGTTGGCCCACCTCAACATCTACTCCATCTATGAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGCTTTGAGTTGGCCCACCTCAACATCTACTCCATCTATGAATTA  450

seq1  TTGGACTTTGTGAAAGGGCTGGCCCTGCAGATTCAAAGCTGCAGGATCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTTTGTGAAAGGGCTGGCCCTGCAGATTCAAAGCTGCAGGATCTC  500

seq1  CATGACACAGGGCAACAACAGGATATCTAAGAGGAGTCCTGGGAGAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACACAGGGCAACAACAGGATATCTAAGAGGAGTCCTGGGAGAGGGC  550

seq1  GAGATCCAGTATTGATAGAGTAGCTGAAGCCAGAGGCCTCTAACCAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCAGTATTGATAGAGTAGCTGAAGCCAGAGGCCTCTAACCAGATT  600

seq1  AATGACTCATTGTAATGAATATTTGCCAGGAAAGTTGTTTGGGCAGAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCATTGTAATGAATATTTGCCAGGAAAGTTGTTTGGGCAGAAGG  650

seq1  GTAAACACCGTGGCATACCTCAGCTTCCATTTTAGAGTTTTGTTTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACACCGTGGCATACCTCAGCTTCCATTTTAGAGTTTTGTTTTGTTT  700

seq1  TGTTTTGTTTTGTTTGTGGGGGAGGCTGCAAGTGTGGAGGGCAGATGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTGTTTGTGGGGGAGGCTGCAAGTGTGGAGGGCAGATGGAG  750

seq1  GTACAGGGAGATGAGTGGGATTGGAGTGCCTGATTCGAAATTCACAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGGAGATGAGTGGGATTGGAGTGCCTGATTCGAAATTCACAAA  798

seq1: chr3_84524974_84526054
seq2: B6Ng01-062M14.g_69_1132 (reverse)

seq1  CATCATTACTGCACTGCTGTGTGCACACCCAAAAGAGTCAAAACCAGTAT  50
      ||||| |||||  ||||||||||||||||||||||||||||   ||||||
seq2  CATCA-TACTG--CTGCTGTGTGCACACCCAAAAGAGTCAA---CAGTAT  44

seq1  ACTATAGAGGGGCCTGTGTGCCCATGTTTATTGTGGCACTGTTCATAACT  100
      |||||||||||  ||||||||||||| ||||||||||||||||||| |||
seq2  ACTATAGAGGG--CTGTGTGCCCATG-TTATTGTGGCACTGTTCAT-ACT  90

seq1  GCCAAGTCATGAAATTAGTCTAGTTGCCACTCAACTGATGAGTAGGCAAA  150
      | |||||||||||  |||||||| ||||||||||||||||||||||||||
seq2  G-CAAGTCATGAA--TAGTCTAG-TGCCACTCAACTGATGAGTAGGCAAA  136

seq1  TAAAACCTGGCATATTGTATGCAATGGGGTATTTATTATTTAGCCTTAAA  200
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  TAAAACCTGGCATA-TGTATGCAATGGGGTA-TTATTATTTAGCCTTAAA  184

seq1  GAATAACAATCGGGTGTTTGCAGGAGAATGGATGGAACTGGAGATCATCA  250
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAATAACAATCGGGTG-TTGCAGGAGAATGGATGGAACTGGAGATCATCA  233

seq1  TGGTGAACAAAAGAAGCCAGCCTTAGATAGATAAATATTACATGTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAACAAAAGAAGCCAGCCTTAGATAGATAAATATTACATGTTTTCT  283

seq1  CCCACATCAGATTCTGGAGGGGCAGGGGGAGACCTGATCATAGAGGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATCAGATTCTGGAGGGGCAGGGGGAGACCTGATCATAGAGGAGAC  333

seq1  CAGAAAGGATTGAATTGATTGGAGGAGCAGGAAGAGTTACTGGTAAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGGATTGAATTGATTGGAGGAGCAGGAAGAGTTACTGGTAAGAGA  383

seq1  TGGTGAGGGAGGGTAAATACAATCAAAGTAACCCATTATTTTATAACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGGGAGGGTAAATACAATCAAAGTAACCCATTATTTTATAACATT  433

seq1  TGCATATGCTAATAGACACTTCAGGACCTGTCAACCAAGAGAAATCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGCTAATAGACACTTCAGGACCTGTCAACCAAGAGAAATCTTAA  483

seq1  ATCATTTTAATTCCATCGGTCCAGGAAAGCAGCTTCTATTTTTAGAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTAATTCCATCGGTCCAGGAAAGCAGCTTCTATTTTTAGAGATA  533

seq1  CTTTGGAGGCTCTGCCTCTAAGAGAGAAGAAAGAGCTGGCCTGGGAGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGGCTCTGCCTCTAAGAGAGAAGAAAGAGCTGGCCTGGGAGTGG  583

seq1  CCTGTGATGTGAAATTGCCCAGGATGATATCTTCCAGCAGCCTGGTGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGATGTGAAATTGCCCAGGATGATATCTTCCAGCAGCCTGGTGTTG  633

seq1  GGACACAGGTCTTCTCAAGTCCAGGCCTGTGGACCAGCAGCTATGATCGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGGTCTTCTCAAGTCCAGGCCTGTGGACCAGCAGCTATGATCGG  683

seq1  GCGAGATGGGTGTCCTAGGTGTCCTTTCTGTTGCTGTGACAAATCCTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGATGGGTGTCCTAGGTGTCCTTTCTGTTGCTGTGACAAATCCTGTA  733

seq1  ACAGAAACCAAGGCTAGGGGGTTTGTTTCATCTTATATTACAGCCAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACCAAGGCTAGGGGGTTTGTTTCATCTTATATTACAGCCAAGGC  783

seq1  AGGAATTCAAGACAGGAGCTTGAGACAAGAACCACACAGATTGTTGCTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTCAAGACAGGAGCTTGAGACAAGAACCACACAGATTGTTGCTTA  833

seq1  CGTTCTGGCTCACTCAGCGGCCATCTTAGGGAGCCCAGACCTAACTTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTGGCTCACTCAGCGGCCATCTTAGGGAGCCCAGACCTAACTTCCT  883

seq1  AGGGGCAGTACTTTCCATAATGGGCTGGACCCTCCTATGTCAATTAGCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAGTACTTTCCATAATGGGCTGGACCCTCCTATGTCAATTAGCAA  933

seq1  TTAAGAAAATGTCTCACAGACAAGCCCAAAGGCCATTCTGTCTGGTCCGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAATGTCTCACAGACAAGCCCAAAGGCCATTCTGTCTGGTCCGT  983

seq1  TCTTCATGACGCTAGGTTTCTGTCAGGTTGATAGCTACAGCTATCACACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGACGCTAGGTTTCTGTCAGGTTGATAGCTACAGCTATCACACA  1033

seq1  GGGTCAGTGGCAAGTAAGCTGTTAAGAATTC  1081
      |||||||||||||||||||||||||||||||
seq2  GGGTCAGTGGCAAGTAAGCTGTTAAGAATTC  1064