BAC Information

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BAC

Clone NameB6Ng01-063D20
Chromosome3 (Build37)
Map Location 67,233,711 - 67,234,753
singlet/doubletsinglet
Overlap geneGfm1
Upstream geneLOC625115, Shox2, Rsrc1, Mlf1
Downstream geneLxn, Rarres1, Mfsd1, LOC667207, Gm412, EG208426, EG545531, LOC631379
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063D20.bB6Ng01-063D20.g
ACCDH883393DH883394
length1,1881,041
definitionDH883393|Mus musculus domesticus DNA, BAC clone: B6Ng01-063D20, 5' end.DH883394|Mus musculus domesticus DNA, BAC clone: B6Ng01-063D20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaaaggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaacccttagat
tctacctcacaccagtcagaatgactaagatcaaaaattcaggtgacagc
ggatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactacaggaggatccagcaatacttctcctgggc
atatatccagaagatgttccaactggtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacgcagat
gcccctcaacagaggaagggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacacaatatgtactcactgataaatggatattagcccagaaac
ttagaatacccaagatataagatacaatttgcaaaacacatgaaactcaa
gaagaacaaagaccaaagtgtggacactttgccccttcttagaattggga
tcaaaacagccatggaaggagttacagagacaaagtttggagctgagatg
aacggatggaccatctagacactgccatactcaaggatccatcccataat
cagctttcgaacgctgacaccattacatacactagcaagattttgctgaa
aggacccaagtatagctgtctcttgtgagaactatttcggggcctagcaa
taacagaagtggattgccccacagtcagcttattggatggatcaccaggg
ccccaatgtaggagctagagaaagtacccaaggagctaaaggggtctgca
accctaataggtggaaaaacaatatgaactaaccagtaccccggagcctc
gtgtctctagctgcatatgtatcagaagatggctatagtcggcattggaa
agagaaggcccattggtttgccaactttaattacctcatacaggaatgcc
agtgccaaaattggaagtgaatggtggcggagattgcg
gaattctttgctgaccaggctatcttggaactcattagagatccgcctag
ttctgcctctgaagtgttcttattagacatgtgtgacgccatacccggca
cgtttttgttttttttatacagagatggttttttaatttttatttttttc
ctttaaagacaaagggaccagagtacctgcctccgtagtaatgacacctc
cctgtgacaatcctctgcataaactacgctttctcctcctgaccaggaga
gggcgcgcgccacgtcgagctcagacagaggtgcctctcccttgtcttcc
tctggccgtcctcctgaccttcctcccggaagtgctcctgcggctccggt
tgccggcgtgactttgagctcttcccgctctgctgccggcgctgagcaca
accgatcacctcagagcaggagccttggaagtggctgttccaggcttgcc
atgcggctgctgcgggtcgccgcagccctggggcgtggaccgttccctcg
ggtccctgcagtcctgggctggcaggggaagcaggtactggtgccagaga
accttccagagcagggcaggttggcgacacctttccttacctggggtctt
gagcagcgatttcccgagccccgtaagcccttgggtatccgcatgccagc
tcggccttgcgacccgcagctctgcgccggggtccctcccttcctgatga
tctaccttaaagagaagtgccccgagtgaaagtcagatgaaagttagtgt
ccccggggctcgaatcccggatttcggactcgttatccagtggtcctctt
actactgggtgtggttgggatgctctctgaacgtgtgggttctattcaac
atcccggtacttcttctctggccaagtttcccagtcagtgtatagattaa
actttgtaagtctttggagtgaggtactcaaagcaaggaagccgtgggta
gatgtgacctctacttgtcatggatacctcgttgcttggctaccagtgtt
cctgtgggtttaaccatccagcgcctgtcagctgtcttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67233711_67234753
seq2: B6Ng01-063D20.g_66_1106

seq1  GAATTCTTTGCTGACCAGGCTATCTTGGAACTCATTAGAGATCCGCCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTGACCAGGCTATCTTGGAACTCATTAGAGATCCGCCTAG  50

seq1  TTCTGCCTCTGAAGTGTTCTTATTAGACATGTGTGACGCCATACCCGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTCTGAAGTGTTCTTATTAGACATGTGTGACGCCATACCCGGCA  100

seq1  CGTTTTTGTTTTTTTTATACAGAGATGGTTTTTTAATTTTTATTTTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTTGTTTTTTTTATACAGAGATGGTTTTTTAATTTTTATTTTTTTC  150

seq1  CTTTAAAGACAAAGGGACCAGAGTACCTGCCTCCGTAGTAATGACACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAGACAAAGGGACCAGAGTACCTGCCTCCGTAGTAATGACACCTC  200

seq1  CCTGTGACAATCCTCTGCATAAACTACGCTTTCTCCTCCTGACCAGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGACAATCCTCTGCATAAACTACGCTTTCTCCTCCTGACCAGGAGA  250

seq1  GGGCGCGCGCCACGTCGAGCTCAGACAGAGGTGCCTCTCCCTTGTCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGCGCGCCACGTCGAGCTCAGACAGAGGTGCCTCTCCCTTGTCTTCC  300

seq1  TCTGGCCGTCCTCCTGACCTTCCTCCCGGAAGTGCTCCTGCGGCTCCGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCGTCCTCCTGACCTTCCTCCCGGAAGTGCTCCTGCGGCTCCGGT  350

seq1  TGCCGGCGTGACTTTGAGCTCTTCCCGCTCTGCTGCCGGCGCTGAGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGGCGTGACTTTGAGCTCTTCCCGCTCTGCTGCCGGCGCTGAGCACA  400

seq1  ACCGATCACCTCAGAGCAGGAGCCTTGGAAGTGGCTGTTCCAGGCTTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGATCACCTCAGAGCAGGAGCCTTGGAAGTGGCTGTTCCAGGCTTGCC  450

seq1  ATGCGGCTGCTGCGGGTCGCCGCAGCCCTGGGGCGTGGACCGTTCCCTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGGCTGCTGCGGGTCGCCGCAGCCCTGGGGCGTGGACCGTTCCCTCG  500

seq1  GGTCCCTGCAGTCCTGGGCTGGCAGGGGAAGCAGGTACTGGTGCCAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTGCAGTCCTGGGCTGGCAGGGGAAGCAGGTACTGGTGCCAGAGA  550

seq1  ACCTTCCAGAGCAGGGCAGGTTGGCGACACCTTTCCTTACCTGGGGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCAGAGCAGGGCAGGTTGGCGACACCTTTCCTTACCTGGGGTCTT  600

seq1  GAGCAGCGATTTCCCGAGCCCCGTAAGCCCTTGGGTATCCGCATGCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCGATTTCCCGAGCCCCGTAAGCCCTTGGGTATCCGCATGCCAGC  650

seq1  TCGGCCTTGCGACCCGCAGCTCTGCGCCGGGGTCCCTCCCTTCCTGATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCTTGCGACCCGCAGCTCTGCGCCGGGGTCCCTCCCTTCCTGATGA  700

seq1  TCTACCTTAAAGAGAAGTGCCCCGAGTGAAGGTCAGATGAAAGTTAGTGT  750
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTACCTTAAAGAGAAGTGCCCCGAGTGAAAGTCAGATGAAAGTTAGTGT  750

seq1  CCCCGGGGCTCGAATCCCGGATTTCGGACTCGTTATCCAGTGGTCCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGGGGCTCGAATCCCGGATTTCGGACTCGTTATCCAGTGGTCCTCTT  800

seq1  ACTACTGGGTGTGGTT-GGATGCTCTCTGAACGTGTGGGTTCTATTCAAC  849
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTACTGGGTGTGGTTGGGATGCTCTCTGAACGTGTGGGTTCTATTCAAC  850

seq1  ATCCCGGTAC-TCTTCTCTGGCCAAGTTTCCCAGTCAGGTGTATAGATTA  898
      |||||||||| |||||||||||||||||||||||||| ||||||||||||
seq2  ATCCCGGTACTTCTTCTCTGGCCAAGTTTCCCAGTCA-GTGTATAGATTA  899

seq1  AACTTTGTAAGTCTTTGGAGTGAGGTACTCAGAGCAGGGAAGCCGTTGGT  948
      ||||||||||||||||||||||||||||||| |||| ||||||||| |||
seq2  AACTTTGTAAGTCTTTGGAGTGAGGTACTCAAAGCAAGGAAGCCGTGGGT  949

seq1  AGATGTGACCTCTTACCTGTCATGGATACCTCGTTTGCTTTGCTACCAAG  998
      |||||||||||| ||| |||||||||||||||| |||||| |||||| ||
seq2  AGATGTGACCTC-TACTTGTCATGGATACCTCG-TTGCTTGGCTACC-AG  996

seq1  TGTTCCTGT-GGTTTAACCATCCAAGCGCTTGTCAGCTGTCTTCTT  1043
      ||||||||| ||||||||||||| ||||| ||||||||||||||||
seq2  TGTTCCTGTGGGTTTAACCATCC-AGCGCCTGTCAGCTGTCTTCTT  1041