BAC Information

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BAC

Clone NameB6Ng01-063K18
Chromosome3 (Build37)
Map Location 137,816,362 - 137,965,512
singlet/doubletdoublet
Overlap geneRg9mtd2, 4930579F01Rik, Adh7, Adh1
Upstream geneLOC100039447, Emcn, EG229862, Ddit4l, LOC668874, H2afz, Dnajb14, Map2k1ip1, Dapp1, EG329763, LOC100039528, Mttp
Downstream geneAdh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771, Rap1gds1, EG229879, B930007M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063K18.bB6Ng01-063K18.g
ACCDH883693DH883694
length1,0351,032
definitionDH883693|Mus musculus domesticus DNA, BAC clone: B6Ng01-063K18, 5' end.DH883694|Mus musculus domesticus DNA, BAC clone: B6Ng01-063K18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,964,467 - 137,965,512)(137,816,362 - 137,817,411)
sequence
gaattccttgttcttccggttacgctgttcaaggatcactcttactttat
aaaaaaacaaaacaaaacaaaaacaaacaaacagctgaagtgaatagcct
tgtgctttattctgtttccgtagatacttttatttctatagagttattcc
ccgagcgtaaccttgctggggaagtaagtggacatgcatgcttttatagt
ttagtaactattgctaagcggttgctagaacctgtgctgagtcacatgtc
tgtgggaacaagggccagcaaacgactggtgatgtggcccttctcattgc
cagggctcagcacaccgttttctatgctcctgagacacggacttcccttc
acaaggagcttcagttctatttagggtttggttttttttttttttttttg
tcctagatgaacaaacatgtaggtattagagatagattcaccaatcagat
gttacaaatattgtcctttgcacaatgcggtcttcctttcccctctgttc
gtccctgtctccccaccccacacccaccctatctccttttctgtctcttc
tctttttaagataggaccttgcgatatagcccggctttgccccaaattca
gattctcttgtccgtaccttctgagtcctggaattgcaggtttatgctac
atcatctggttggttttatttgtttatagcaaaatttgcatgtctttcag
agtttgactagtggtgtgatacaaggagaagtgtgtaagattattgaagt
taatctcccactttgagttaagtcacaaattgtcaaagaatcaaagcaat
acgttctcagaccacggacagtttcttgtcgtttgcactcctatgtctgt
tactcctataactgtgtttcgccactcatgaagctactggtgttccaacc
acacactcacttctgtgaaaacagccaactgagactaaccagtagtttct
agttggaatacatgtacatataaaaaagtgttacctatttcaacattctc
ccataggaaaaaaagtatacatcgtcttccatgaa
gaattcctcccatgtcacacatggtcacatctgcctgtccagtggtgact
gcatggctggggagctcctaggtgtaatatggctgagaaactggattttt
tttttttaattataaatttgaagttggcaggtgtggctaggcattgggta
aacaaatctagaatatcccaggggccttgtcagaatggtcattagccttt
ctcttgtcagtgggaaattctgatttataatatacatacaagcagattct
ctgtttaagttgtatctgtttctctaataaactattcctattcaaaaagc
ccctggctcctctaatattttgcccctacataggaaaagtacttgttgag
aaattcagcttacatttcctggacagtctttttatctgggatagacacag
atttccagcatttcaagtttgagaaaatataaaatccttatctaacagta
agttggtagaaagggaaaaataaaatgtaagaaaaaaaatgaaatactct
tcactcagggttttatttcattgacatatttgtgtctaagtgtataattg
aaactgaatttcctttaaatgtttttgtagcagattttagcagagccatc
gtatgtggcctggttctgagtagtggcacctaggctttgacgtgacgtct
gtaactagtcagtgattggtatctgagatcttacggggttgtgcatttga
aggactctcagagcctttacgtaacagtctgggagcctcctatggctgag
aattgcttaggtatggtttccttcagacagcccctagattgtattagagg
ttctggtatttggaaattgacctgctaacagtgccttttatgttaaataa
aaagtacttgtgctaagctgtgttgtccagtcctggagggcggattcccg
tgcgctgaggagcgaactcagcttgtatgttgctctgtgtgtggatcaca
tctgcataactagaacactgacatagtttacctgacaaagatgtgggtgc
tcgtctccagttccatgatgttcactgaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_137964467_137965512
seq2: B6Ng01-063K18.b_42_1076 (reverse)

seq1  TTCATGGGAAGACGATGTAATACTGTTTTTCCTATGGGGAGAATGGTTGA  50
      ||||| |||||||||||| ||||| |||||||||| |||||||| |||||
seq2  TTCAT-GGAAGACGATGT-ATACTTTTTTTCCTAT-GGGAGAAT-GTTGA  46

seq1  AATAGGTTAAACAACTGTATTTATATGTACATGTATTCCAACCTAGAAAC  100
      |||||||  ||| ||| | |||||||||||||||||||||| ||||||||
seq2  AATAGGT--AAC-ACT-TTTTTATATGTACATGTATTCCAA-CTAGAAAC  91

seq1  TACTGGTTAGTTCTCAGTTGGCTGTTTTCACAGAAGTGAGTTGTGTGGTT  150
      |||||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  TACTGGTTAG-TCTCAGTTGGCTGTTTTCACAGAAGTGAG-TGTGTGGTT  139

seq1  GGAACACCAGTAGCTTCATGAGTGGCGAAACACAGTTATAGGAGTAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACCAGTAGCTTCATGAGTGGCGAAACACAGTTATAGGAGTAACAG  189

seq1  ACATAGGAGTGCAAACGACAAGAAACTGTCCGTGGTCTGAGAACGTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGAGTGCAAACGACAAGAAACTGTCCGTGGTCTGAGAACGTATTG  239

seq1  CTTTGATTCTTTGACAATTTGTGACTTAACTCAAAGTGGGAGATTAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATTCTTTGACAATTTGTGACTTAACTCAAAGTGGGAGATTAACTT  289

seq1  CAATAATCTTACACACTTCTCCTTGTATCACACCACTAGTCAAACTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATCTTACACACTTCTCCTTGTATCACACCACTAGTCAAACTCTGA  339

seq1  AAGACATGCAAATTTTGCTATAAACAAATAAAACCAACCAGATGATGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGCAAATTTTGCTATAAACAAATAAAACCAACCAGATGATGTAG  389

seq1  CATAAACCTGCAATTCCAGGACTCAGAAGGTACGGACAAGAGAATCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACCTGCAATTCCAGGACTCAGAAGGTACGGACAAGAGAATCTGAA  439

seq1  TTTGGGGCAAAGCCGGGCTATATCGCAAGGTCCTATCTTAAAAAGAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGCAAAGCCGGGCTATATCGCAAGGTCCTATCTTAAAAAGAGAAG  489

seq1  AGACAGAAAAGGAGATAGGGTGGGTGTGGGGTGGGGAGACAGGGACGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAAAGGAGATAGGGTGGGTGTGGGGTGGGGAGACAGGGACGAAC  539

seq1  AGAGGGGAAAGGAAGACCGCATTGTGCAAAGGACAATATTTGTAACATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGAAAGGAAGACCGCATTGTGCAAAGGACAATATTTGTAACATCT  589

seq1  GATTGGTGAATCTATCTCTAATACCTACATGTTTGTTCATCTAGGACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTGAATCTATCTCTAATACCTACATGTTTGTTCATCTAGGACAAA  639

seq1  AAAAAAAAAAAAAAACCAAACCCTAAATAGAACTGAAGCTCCTTGTGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAACCAAACCCTAAATAGAACTGAAGCTCCTTGTGAAG  689

seq1  GGAAGTCCGTGTCTCAGGAGCATAGAAAACGGTGTGCTGAGCCCTGGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCCGTGTCTCAGGAGCATAGAAAACGGTGTGCTGAGCCCTGGCAA  739

seq1  TGAGAAGGGCCACATCACCAGTCGTTTGCTGGCCCTTGTTCCCACAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGGGCCACATCACCAGTCGTTTGCTGGCCCTTGTTCCCACAGACA  789

seq1  TGTGACTCAGCACAGGTTCTAGCAACCGCTTAGCAATAGTTACTAAACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTCAGCACAGGTTCTAGCAACCGCTTAGCAATAGTTACTAAACTA  839

seq1  TAAAAGCATGCATGTCCACTTACTTCCCCAGCAAGGTTACGCTCGGGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCATGCATGTCCACTTACTTCCCCAGCAAGGTTACGCTCGGGGAA  889

seq1  TAACTCTATAGAAATAAAAGTATCTACGGAAACAGAATAAAGCACAAGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTATAGAAATAAAAGTATCTACGGAAACAGAATAAAGCACAAGGC  939

seq1  TATTCACTTCAGCTGTTTGTTTGTTTTTGTTTTGTTTTGTTTTTTTATAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTTCAGCTGTTTGTTTGTTTTTGTTTTGTTTTGTTTTTTTATAA  989

seq1  AGTAAGAGTGATCCTTGAACAGCGTAACCGGAAGAACAAGGAATTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGTGATCCTTGAACAGCGTAACCGGAAGAACAAGGAATTC  1035

seq1: chr3_137816362_137817411
seq2: B6Ng01-063K18.g_68_1099

seq1  GAATTCCTCCCATGTCACACATGGTCACATCTGCCTGTCCAGTGGTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCATGTCACACATGGTCACATCTGCCTGTCCAGTGGTGACT  50

seq1  GCATGGCTGGGGAGCTCCTAGGTGTAATATGGCTGAGAAACTGGATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCTGGGGAGCTCCTAGGTGTAATATGGCTGAGAAACTGGATTTTT  100

seq1  TTTTTTTAATTATAAATTTGAAGTTGGCAGGTGTGGCTAGGCATTGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAATTATAAATTTGAAGTTGGCAGGTGTGGCTAGGCATTGGGTA  150

seq1  AACAAATCTAGAATATCCCAGGGGCCTTGTCAGAATGGTCATTAGCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATCTAGAATATCCCAGGGGCCTTGTCAGAATGGTCATTAGCCTTT  200

seq1  CTCTTGTCAGTGGGAAATTCTGATTTATAATATACATACAAGCAGATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTCAGTGGGAAATTCTGATTTATAATATACATACAAGCAGATTCT  250

seq1  CTGTTTAAGTTGTATCTGTTTCTCTAATAAACTATTCCTATTCAAAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAAGTTGTATCTGTTTCTCTAATAAACTATTCCTATTCAAAAAGC  300

seq1  CCCTGGCTCCTCTAATATTTTGCCCCTACATAGGAAAAGTACTTGTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTCCTCTAATATTTTGCCCCTACATAGGAAAAGTACTTGTTGAG  350

seq1  AAATTCAGCTTACATTTCCTGGACAGTCTTTTTATCTGGGATAGACACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGCTTACATTTCCTGGACAGTCTTTTTATCTGGGATAGACACAG  400

seq1  ATTTCCAGCATTTCAAGTTTGAGAAAATATAAAATCCTTATCTAACAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGCATTTCAAGTTTGAGAAAATATAAAATCCTTATCTAACAGTA  450

seq1  AGTTGGTAGAAAGGGAAAAATAAAATGTAAGAAAAAAAATGAAATACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTAGAAAGGGAAAAATAAAATGTAAGAAAAAAAATGAAATACTCT  500

seq1  TCACTCAGGGTTTTATTTCATTGACATATTTGTGTCTAAGTGTATAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAGGGTTTTATTTCATTGACATATTTGTGTCTAAGTGTATAATTG  550

seq1  AAACTGAATTTCCTTTAAATGTTTTTGTAGCAGATTTTAGCAGAGCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAATTTCCTTTAAATGTTTTTGTAGCAGATTTTAGCAGAGCCATC  600

seq1  GTATGTGGCCTGGTTCTGAGTAGTGGCACCTAGGCTTTGACGTGACGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGGCCTGGTTCTGAGTAGTGGCACCTAGGCTTTGACGTGACGTCT  650

seq1  GTAACTAGTCAGTGATTGGTATCTGAGATCTTACGGGGTTGTGCATTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTAGTCAGTGATTGGTATCTGAGATCTTACGGGGTTGTGCATTTGA  700

seq1  AGGACTCTCAGAGCCTTTACGTAACAGTCTGGGAGCCTCCTATGGCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCTCAGAGCCTTTACGTAACAGTCTGGGAGCCTCCTATGGCTGAG  750

seq1  AATTGCTTAGGTATGGTTTCCTTCAGACAGCCCCTAGATTGTATTAGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTAGGTATGGTTTCCTTCAGACAGCCCCTAGATTGTATTAGAGG  800

seq1  TTCTGGTATTTGGAAATTGACCTGCTAACAGTGCCTTTTATGTTAAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTATTTGGAAATTGACCTGCTAACAGTGCCTTTTATGTTAAATAA  850

seq1  AAAGTACTTGTGCTAAGCTGGTGTTGTCCAGTCCTGGAGGGGCGGATTCC  900
      ||||||||||||||||||| |||||||||||||||||| |||||||||||
seq2  AAAGTACTTGTGCTAAGCT-GTGTTGTCCAGTCCTGGA-GGGCGGATTCC  898

seq1  CGTGCGCTGAGGAGCCGAAACTCAGCTTGTAGTGGTGCCTCTGTGTGTGG  950
      |||||||||||||||   ||||||||||||| || || |||||||||| |
seq2  CGTGCGCTGAGGAGC--GAACTCAGCTTGTA-TGTTG-CTCTGTGTGT-G  943

seq1  GATCACATCCTGCATAACCTAGAACACTGACATAGTTTACCCTGACAGAA  1000
      |||||||| |||||||| ||||||||||||||||||||| ||||||   |
seq2  GATCACAT-CTGCATAA-CTAGAACACTGACATAGTTTA-CCTGAC---A  987

seq1  AGGATGGTGGTGCTCGTCTCCAGTTCCCATGGAGTGTTTCACTGAGAGGA  1050
      | ||||  ||||||||||||||||| |||||  |   |||||||| ||||
seq2  AAGATGTGGGTGCTCGTCTCCAGTT-CCATGATG---TTCACTGA-AGGA  1032