BAC Information

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BAC

Clone NameB6Ng01-064H04
Chromosome3 (Build37)
Map Location 83,294,616 - 83,295,301
singlet/doubletsinglet
Overlap genenone
Upstream geneNpy2r, LOC100041940, EG633285, Lrat, Fgg, Fga, Fgb, Plrg1, EG627094, Dchs2
Downstream gene1700028M03Rik, LOC100042007, LOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064H04.bB6Ng01-064H04.g
ACCDH884231DH884232
length9811,153
definitionDH884231|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H04, 5' end.DH884232|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggaattgaattgtgtgtagtataatgtttatacacaagatgt
gcgacagaaggagaaccagtgttagaacccagtaaaaccaatgcacagat
ggagtgtgaagtttatacgtgaaagcctagttaaaataaagaagaagtat
tcaagtcatgaatctcaatttttaaaatttgtcattgtccagtgtatgta
gttttaagtttctgacaactcttcattttatgtggccttaaaccttcata
aaaacaacaaacaaacagcccaaaaacacaaaggaaaatgtagattcaac
attgaaacatgtttacaaaggtaggacaagttttgttgtgtttttgaatg
ctacacttttcatttggacctggtaatgcagagggaaatgccacaggggt
agaaactggacttactctagaccaaaatctagtttctgtttgttgctttc
taatatacctactccatttgttatagttgtaatgatctgcacaaagcaag
accctgaaagagcctctctctgtctctctgtctctctctgtctccctctc
tctgtctgtctgtctctgtctgtctgtctgtctgtctgtctgtatatgtg
tgtaagtgtgtgtgttttaacttcctattgtaacaagatacttacaataa
ttaatttaaagaaatgtggtggtttgaatgagtcattcttcataatcttg
gccatttgaatacttgtcctttcatagtggcactctttgggaggtgtggt
cttgttagaggaagtgcatcattgggagtggattttgaggtgtcaaaaga
ctcaagtcgtttctagttagtgctctctccttcttgcttggagttcaggt
gtgaggtctctactataccagcctccatcctcccccactgtgttatgatg
aactctgtctctctggacctgtaagctttaacatttccctctgtagctgc
tgttgccatggtgttttatcacagcatagaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaagttggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccggaagctggaaagaacccagat
gcccctcaacagaggaatggataaagaaatgtggtacatctacataatgg
agtactactcagctattaaagagaatgaatttatgaaattcatagccaaa
tggatggacctggagggcataatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtgtatattagcccaaaacct
aggatacccaagatataagatacaatttcctaaacacatgaaactcaaga
aaatgaagactgaagtgtggacactatgcccctccttagaagtgggaaca
aaacacccttggaaggagttacagagacaaagtttggagctgagatgaaa
ggatggaccatgtagagactgccatatccagggatccaccccataatcag
catccaaacgctgacaccattgcatacactagcaagattttatcgaaagg
acccagatgtagctgtctcttgtgagactatgccagggcctagcaaacac
agaagtggatgctcacagtcagctaatggatggatcacaaggctcccaat
ggagagctagagaagtacccaaggagctaagggatctgcatcctatagtt
gacacattatgactaccagtccccggactccttgactctagctgctttgt
atcaagatggcctatgtctgcattccttgcaagaaagccatggacccgca
aactttttatcccagtacaaggacgccagggcaaaagggaatgtgtgggg
gat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_83294616_83295301
seq2: B6Ng01-064H04.b_44_729 (reverse)

seq1  ATGACTCATTCAAACCACCACATTTCTTTAAATTAATTATTGTAAGTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCATTCAAACCACCACATTTCTTTAAATTAATTATTGTAAGTATC  50

seq1  TTGTTACAATAGGAAGTTAAAACACACACACTTACACACATATACAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACAATAGGAAGTTAAAACACACACACTTACACACATATACAGACA  100

seq1  GACAGACAGACAGACAGACAGAGACAGACAGACAGAGAGAGGGAGACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGACAGACAGACAGAGACAGACAGACAGAGAGAGGGAGACAGA  150

seq1  GAGAGACAGAGAGACAGAGAGAGGCTCTTTCAGGGTCTTGCTTTGTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAGAGAGACAGAGAGAGGCTCTTTCAGGGTCTTGCTTTGTGCAG  200

seq1  ATCATTACAACTATAACAAATGGAGTAGGTATATTAGAAAGCAACAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTACAACTATAACAAATGGAGTAGGTATATTAGAAAGCAACAAACA  250

seq1  GAAACTAGATTTTGGTCTAGAGTAAGTCCAGTTTCTACCCCTGTGGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAGATTTTGGTCTAGAGTAAGTCCAGTTTCTACCCCTGTGGCATT  300

seq1  TCCCTCTGCATTACCAGGTCCAAATGAAAAGTGTAGCATTCAAAAACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTGCATTACCAGGTCCAAATGAAAAGTGTAGCATTCAAAAACACA  350

seq1  ACAAAACTTGTCCTACCTTTGTAAACATGTTTCAATGTTGAATCTACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTTGTCCTACCTTTGTAAACATGTTTCAATGTTGAATCTACATT  400

seq1  TTCCTTTGTGTTTTTGGGCTGTTTGTTTGTTGTTTTTATGAAGGTTTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGTGTTTTTGGGCTGTTTGTTTGTTGTTTTTATGAAGGTTTAAG  450

seq1  GCCACATAAAATGAAGAGTTGTCAGAAACTTAAAACTACATACACTGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATAAAATGAAGAGTTGTCAGAAACTTAAAACTACATACACTGGAC  500

seq1  AATGACAAATTTTAAAAATTGAGATTCATGACTTGAATACTTCTTCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAAATTTTAAAAATTGAGATTCATGACTTGAATACTTCTTCTTTA  550

seq1  TTTTAACTAGGCTTTCACGTATAAACTTCACACTCCATCTGTGCATTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTAGGCTTTCACGTATAAACTTCACACTCCATCTGTGCATTGGT  600

seq1  TTTACTGGGTTCTAACACTGGTTCTCCTTCTGTCGCACATCTTGTGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGGGTTCTAACACTGGTTCTCCTTCTGTCGCACATCTTGTGTATA  650

seq1  AACATTATACTACACACAATTCAATTCCAAGAATTC  686
      ||||||||||||||||||||||||||||||||||||
seq2  AACATTATACTACACACAATTCAATTCCAAGAATTC  686