BAC Information

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BAC

Clone NameB6Ng01-065B20
Chromosome3 (Build37)
Map Location 77,085,289 - 77,086,191
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635
Downstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065B20.bB6Ng01-065B20.g
ACCDH884687DH884688
length1,257944
definitionDH884687|Mus musculus domesticus DNA, BAC clone: B6Ng01-065B20, 5' end.DH884688|Mus musculus domesticus DNA, BAC clone: B6Ng01-065B20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaatcataataaagcaatttacttcacatcaa
cagtcaatatcaaattaaatggagacatacatgaagcaatcctactgaaa
tcggggacaagacaaggatgcccgctctccccatatctattcaatatagt
acttgaagtgttagctagaacaataagccaaaaaaagagatcaagggaat
acaaattggtaaagaagaaataaagtatcaccatttacagatgatatgac
agtatacataagtgaccccaaaaattctaccagagaacttctccaaatga
taaacaacttcaacaaagtagccagatataaaattaactcaaaaaattag
taaccttccttaacacaagtgataaacaagccaagagagaaattagggaa
acaattcccttcaccatagccactaataatataaaatatcttagggtaac
tccaaccaaacaagtgaaagtcctgtaacttcaagtctgtcaacaaagaa
atcgaagatctcagaaaattgagaggtctcccctgctcatggattggcag
aattaacatagcaaaattggccatcctaccaagggcaatatatacattca
gtgcaatccccatccaaattccaacccaattcttcaaagacgtggaaagc
acagttctcaaattcatctggaaaggaaaaaacaaaaaacaaaaaacata
agacataaaacaacaacataaaacagagtagggaaaacaattattaacaa
taaaaaacagctgagggaaccaccatccctgaccttaagctttactacag
aataatagtaataaaaactgcatggtactgatacagagacagatacgttg
atcaatgaatagaactgaagacccagaaataaaaccacactcttatggtc
acttgattttgacaaagattccaatagatacactgaatctaatagaagag
aaagtgtgaaatagacttgaatttatggcacaaggggaaattttctaaca
gaactctagtgctcatgcactagatcaagaattgataaatggaacctcat
gaaactggaaagcttgtaggcaaaggaaataggtcaataagtcattcagc
aacctacagatggggaaatcttccctagccccattccatagaagcctaat
tctaaatatttaagactcagaagttatcccaaaacccacaccattcagaa
aaaaatggctagctactgaatcaccgaggaatcatggtagagaagaagtt
ccgagag
gaattcagtacaaccagtaatgttcatgcttctattgaaccaatgggtgt
attttgttaggctaatcgttattgtagttctcatggtttacagctgggta
aaactggttgatgactattctcagccagcattaagtgagtagtatcccaa
tgagaaagctaaccatcagggaggaggcttcctggtttgtaccagttgag
ttcacagggtcttattattgacttattgtgaggggggggggaaaggccat
taaaagagaatgtattattttgtgaatctctgtctccctgagcaacaacg
caaagaaaactgttccacatcttgcattagactatctaaacaaaatttta
aaaatgaataggtcctgtgtcaacaatcgagtatttgcctagcatgtgaa
tgtcactgagtttaactcccaatatcataaataaatacaaaattagtaac
attaagtgagaatcactcataattatataaaatttaaaattaaaatttca
tgtaaaaatcccacatttataaaacacatagaacgcattctatgaaattt
gtgatagtgttttgggactcaatgcaatcaagcttcaatggcttccttgc
taaaacctccctctagaaactgttttaactcttctgaactcgtttccgta
tctgatcagtgaactgggcacatgttgctgagagcagcacagtaatgttg
taccccattaatggtctgaaatttacctttatgtgagtttgatgaaacaa
acctatgcaaagattttagaaaaagctgctactgaaagctgtgggccttt
tatctctaaatgattattagagcactaattctccagagccaacattttca
gagattctaccctaatatcattatccatatgatataatatcataatagag
aatcaggctttattggattggtaatcttacggaataatttagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77085289_77086191
seq2: B6Ng01-065B20.g_68_966

seq1  GAATTCAGTACAACCAGTAATGTTCATGCTTCTATTGAACCAATGGGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACAACCAGTAATGTTCATGCTTCTATTGAACCAATGGGTGT  50

seq1  ATTTTGTTAGGCTAATCGTTATTGTAGTTCTCATGGTTTACAGCTGGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTAGGCTAATCGTTATTGTAGTTCTCATGGTTTACAGCTGGGTA  100

seq1  AAACTGGTTGATGACTATTCTCAGCCAGCATTAAGTGAGTAGTATCCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGTTGATGACTATTCTCAGCCAGCATTAAGTGAGTAGTATCCCAA  150

seq1  TGAGAAAGCTAACCATCAGGGAGGAGGCTTCCTGGTTTGTACCAGTTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGCTAACCATCAGGGAGGAGGCTTCCTGGTTTGTACCAGTTGAG  200

seq1  TTCACAGGGTCTTATTATTGACTTATTGTGAGGGGGGGGGGAAAGGCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGGTCTTATTATTGACTTATTGTGAGGGGGGGGGGAAAGGCCAT  250

seq1  TAAAAGAGAATGTATTATTTTGTGAATCTCTGTCTCCCTGAGCAACAACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAGAATGTATTATTTTGTGAATCTCTGTCTCCCTGAGCAACAACG  300

seq1  CAAAGAAAACTGTTCCACATCTTGCATTAGACTATCTAAACAAAATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAACTGTTCCACATCTTGCATTAGACTATCTAAACAAAATTTTA  350

seq1  AAAATGAATAGGTCCTGTGTCAACAATCGAGTATTTGCCTAGCATGTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATAGGTCCTGTGTCAACAATCGAGTATTTGCCTAGCATGTGAA  400

seq1  TGTCACTGAGTTTAACTCCCAATATCATAAATAAATACAAAATTAGTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTGAGTTTAACTCCCAATATCATAAATAAATACAAAATTAGTAAC  450

seq1  ATTAAGTGAGAATCACTCATAATTATATAAAATTTAAAATTAAAATTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGAGAATCACTCATAATTATATAAAATTTAAAATTAAAATTTCA  500

seq1  TGTAAAAATCCCACATTTATAAAACACATAGAACGCATTCTATGAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAATCCCACATTTATAAAACACATAGAACGCATTCTATGAAATTT  550

seq1  GTGATAGTGTTTT-GGACTCAATGCAATCAAGCTTCAATGGCTTCCTTGC  599
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTGATAGTGTTTTGGGACTCAATGCAATCAAGCTTCAATGGCTTCCTTGC  600

seq1  TAAAACCT-CCTCTAGAAACTGTTTTAACTCTTCTGAACTCGTTTCCGTA  648
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCTCCCTCTAGAAACTGTTTTAACTCTTCTGAACTCGTTTCCGTA  650

seq1  TCTGATCAGTGAACTGGGCACATGTTGCTGAGAGCAGCACAGTAATGTTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCAGTGAACTGGGCACATGTTGCTGAGAGCAGCACAGTAATGTTG  700

seq1  TA-CCCATTAATGGTCTGAAATTTACCTTTATGTGAG-TTGATGAAAACA  746
      || |||||||||||||||||||||||||||||||||| |||||| |||||
seq2  TACCCCATTAATGGTCTGAAATTTACCTTTATGTGAGTTTGATG-AAACA  749

seq1  AACCTATGCAAAGATTTTAGAAAAAGCTGCTACTGAAAGCTGTGGGCCTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATGCAAAGATTTTAGAAAAAGCTGCTACTGAAAGCTGTGGGCCTT  799

seq1  TTATCTCTAAATGTATATTAGAGCACTAATTCTCCAGCAGCAACATTTTC  846
      |||||||||||||  ||||||||||||||||||||||   ||||||||||
seq2  TTATCTCTAAATGATTATTAGAGCACTAATTCTCCAGAGCCAACATTTTC  849

seq1  AGAGATTCTACCCATAATATTCATTATTCTATATGAATATTATATAATCA  896
      ||||||||||||| ||||| |||||| || ||||||    ||||  ||||
seq2  AGAGATTCTACCC-TAATA-TCATTA-TCCATATGA----TATAATATCA  892

seq1  TAATAGA  903
      |||||||
seq2  TAATAGA  899