BAC Information

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BAC

Clone NameB6Ng01-065L24
Chromosome3 (Build37)
Map Location 77,595,300 - 77,771,323
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
Downstream geneEG626461, LOC667526, LOC626479, LOC100041691, LOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065L24.bB6Ng01-065L24.g
ACCDH885135DH885136
length9191,145
definitionDH885135|Mus musculus domesticus DNA, BAC clone: B6Ng01-065L24, 5' end.DH885136|Mus musculus domesticus DNA, BAC clone: B6Ng01-065L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,595,300 - 77,595,921)(77,770,163 - 77,771,323)
sequence
gaattctagagaaaactaacaagtttttaaatatttaaaataatgctttt
tagaatgtagttgtggtttcagaagcttgtgaatgaaaaatttaaaaata
tgtgtaagataatgactcacttctttttaaatatattttattacttcttt
gagaattccatacatgcatataatataatttgaatacattcttccatttt
gtctccttccaaatccggttaatttcactcactacctccatagttcctcc
tatattaatttaataggtgataccctaatatgagggccatccactagatt
ttggtcattctaccagagccacacccttttagaaaactgactctcttttc
ccaagaaggcatcagttgtcacatggtcctcagctatgggtcagaataca
taagctccacctgcaggcatgctaaaatggtgataacttggtttggtata
agtttcctgcaggcaaacatagctgctgtgaactcatgggagcaggattc
tgctatgtccaacatatactgcttttgcctcattgttctctgacctctgg
ctctttcagcctatttaccctacttcaaccatggtccctgagccttgctt
gtatagcttgggatacaaatgtctcatttattcctgagtactccacaggc
aaatgcactttgaccaatatgagcttctgggttaactgctgaacaataaa
caaagaaccttctccaattaggtgtcagagccaacttcaacaaaataaat
gacaaacacttctaaaaaatttaaaggtcactaaaaatatggagagtctg
aaaaactttcacaattaagaaagacttcaggatgcatggctactaaatat
tatttggaatttacatggaaattttagaagctaggaaacaaaattaaagg
tagaaaatagttaagaatg
gaattctatcctgactgtatgtaatcagtgctatgacatattctggaaaa
tataagaactacaatatgattcccacataatggcaagaattttagttcaa
tgaagcttgtgtgaaaagatctgctgtctagaatcagatatgcggacttt
aaatatattacttaagatatgttcctttttatatgtaatggatgctcatc
attgttgagaaatctatagaaatggaaaaaataaaattattttcaaagcc
gtgaaagtagcacatttttttcacaaacaagttcatacatatatgcatat
aaatgcacatagatatgtggtgtgatgcttatttcttgataattcaatta
aaaatttgctccttttctttccattaatatgcctaacacaagaataaaat
ctgctttgtccagatgaatctgatagttctccagtctcgtgtgtagatgt
aacctttgctaagctgcacttactttgctttgcactgatttgtagtgtat
gtcgtttgtaccagaggtatttagtttattcaggggctctatgcagataa
ataatttccactcaaaagtactgggaatagcttgaatacttcatatttgg
tattattaagatatgtgagctcccaaataaatatggttatttttaaattt
ctcactaaactgaatggactgtgctaataatctgcttcattcggtgcttg
caattcccagaaagttttatagttctgttccattttagtgaaatacatat
ttaataagcaaatttcttttatattgacactttaaacacaaggatttgct
agttgtaaagaatgagacttatgtctgtacacataacttcacctacagca
cattaagggaattttattgaagatgaacaaatggagtataaactatttct
caggaacagttatcaatgctatagccaaaatagagaactactttccttat
ttttattgtatcatattgcatttctctggggcaataaacatgaacatgaa
aactaaatgtttagatgttatggcttacattacggagttaaagattgtat
tttttcaccgagaatgtaggtcaatcatatgacgtgccttagagaaaacg
gtcagaatccagcctaattttccatgatgtgggtgttgctattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77595300_77595921
seq2: B6Ng01-065L24.b_47_668

seq1  GAATTCTAGAGAAAACTAACAAGTTTTTAAATATTTAAAATAATGCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAGAAAACTAACAAGTTTTTAAATATTTAAAATAATGCTTTT  50

seq1  TAGAATGTAGTTGTGGTTTCAGAAGCTTGTGAATGAAAAATTTAAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGTAGTTGTGGTTTCAGAAGCTTGTGAATGAAAAATTTAAAAATA  100

seq1  TGTGTAAGATAATGACTCACTTCTTTTTAAATATATTTTATTACTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAGATAATGACTCACTTCTTTTTAAATATATTTTATTACTTCTTT  150

seq1  GAGAATTCCATACATGCATATAATATAATTTGAATACATTCTTCCATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCCATACATGCATATAATATAATTTGAATACATTCTTCCATTTT  200

seq1  GTCTCCTTCCAAATCCGGTTAATTTCACTCACTACCTCCATAGTTCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTTCCAAATCCGGTTAATTTCACTCACTACCTCCATAGTTCCTCC  250

seq1  TATATTAATTTAATAGGTGATACCCTAATATGAGGGCCATCCACTAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAATTTAATAGGTGATACCCTAATATGAGGGCCATCCACTAGATT  300

seq1  TTGGTCATTCTACCAGAGCCACACCCTTTTAGAAAACTGACTCTCTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATTCTACCAGAGCCACACCCTTTTAGAAAACTGACTCTCTTTTC  350

seq1  CCAAGAAGGCATCAGTTGTCACATGGTCCTCAGCTATGGGTCAGAATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGGCATCAGTTGTCACATGGTCCTCAGCTATGGGTCAGAATACA  400

seq1  TAAGCTCCACCTGCAGGCATGCTAAAATGGTGATAACTTGGTTTGGTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCCACCTGCAGGCATGCTAAAATGGTGATAACTTGGTTTGGTATA  450

seq1  AGTTTCCTGCAGGCAAACATAGCTGCTGTGAACTCATGGGAGCAGGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCTGCAGGCAAACATAGCTGCTGTGAACTCATGGGAGCAGGATTC  500

seq1  TGCTATGTCCAACATATACTGCTTTTGCCTCATTGTTCTCTGACCTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGTCCAACATATACTGCTTTTGCCTCATTGTTCTCTGACCTCTGG  550

seq1  CTCTTTCAGCCTATTTACCCTACTTCAACCATGGTCCCTGAGCCTTGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCAGCCTATTTACCCTACTTCAACCATGGTCCCTGAGCCTTGCTT  600

seq1  GTATAGCTTGGGATACAAATGT  622
      ||||||||||||||||||||||
seq2  GTATAGCTTGGGATACAAATGT  622

seq1: chr3_77770163_77771323
seq2: B6Ng01-065L24.g_66_1210 (reverse)

seq1  TGAATAGCAACACCACAATCAGTGAAAAATATAAGCTGTGAATTCTGACA  50
      ||||||||||||||   |||| || ||||| || ||  || |||||||| 
seq2  TGAATAGCAACACCCACATCA-TGGAAAAT-TAGGC--TGGATTCTGAC-  45

seq1  TGTTTTTTCACTAAGGCACCAGTCCATAATGA-TGAACTACATACTCTGT  99
          ||||| |||||||||  || ||| |||| ||| |||||| ||| ||
seq2  --CGTTTTCTCTAAGGCAC--GT-CAT-ATGATTGACCTACATTCTCGGT  89

seq1  GTAGAAAAATACATCTTTTAACTCGTTAATGTTAGGCATAACATTCTAAA  149
      |   |||||||||   ||||||||  |||||| || ||||||| ||||||
seq2  G--AAAAAATACAATCTTTAACTCCGTAATGTAAGCCATAACA-TCTAAA  136

seq1  CATTTTAGTTTTCATGTTTAATGTTTATTGCCACCAGAGAAATGCAATAT  199
      || ||||||||||||| || |||||||||||| |||||||||||||||||
seq2  CA-TTTAGTTTTCATG-TTCATGTTTATTGCC-CCAGAGAAATGCAATAT  183

seq1  GATACATATAAAATAA-GAAAGTAGTTCTCTATTTTGGCTATTAGCATTG  248
      ||||||   ||||||| |||||||||||||||||||||||| ||||||||
seq2  GATACAATAAAAATAAGGAAAGTAGTTCTCTATTTTGGCTA-TAGCATTG  232

seq1  ATAACTGTTCCTGAG-AATAGTTTATACTCCATTTGTTCATCTTCAATAA  297
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATAACTGTTCCTGAGAAATAGTTTATACTCCATTTGTTCATCTTCAATAA  282

seq1  AATTCCCTTAATGTGCTGTAGGTGAAG-TATGTGTACAGACATAAGTCTC  346
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AATTCCCTTAATGTGCTGTAGGTGAAGTTATGTGTACAGACATAAGTCTC  332

seq1  ATTCTTTACAACTAGCAAATCCTTGTGTTTAAAAGTGTCAATATAAAAGA  396
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATTCTTTACAACTAGCAAATCCTTGTGTTT-AAAGTGTCAATATAAAAGA  381

seq1  AATTTGCTTATTAAATATGTATTTCACTAAAATGGAACAGAACTATAAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCTTATTAAATATGTATTTCACTAAAATGGAACAGAACTATAAAA  431

seq1  CTTTCTTGGGAATTGCAAGCACCGAATGAAGCAGATTATTAGCACAGTCC  496
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTC-TGGGAATTGCAAGCACCGAATGAAGCAGATTATTAGCACAGTCC  480

seq1  ATTCAGTTTAGTGAGAAATTTAAAAATAACCATATTTATTTGGGAGCTCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTTAGTGAGAAATTTAAAAATAACCATATTTATTTGGGAGCTCA  530

seq1  CATATCTTAATAATACCAAATATGAAGTATTCAAGCTATTCCCAGTACTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTTAATAATACCAAATATGAAGTATTCAAGCTATTCCCAGTACTT  580

seq1  TTGAGTGGAAATTATTTATCTGCATAGAGCCCCTGAATAAACTAAATACC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGGAAATTATTTATCTGCATAGAGCCCCTGAATAAACTAAATACC  630

seq1  TCTGGTACAAACGACATACACTACAAATCAGTGCAAAGCAAAGTAAGTGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTACAAACGACATACACTACAAATCAGTGCAAAGCAAAGTAAGTGC  680

seq1  AGCTTAGCAAAGGTTACATCTACACACGAGACTGGAGAACTATCAGATTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGCAAAGGTTACATCTACACACGAGACTGGAGAACTATCAGATTC  730

seq1  ATCTGGACAAAGCAGATTTTATTCTTGTGTTAGGCATATTAATGGAAAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGACAAAGCAGATTTTATTCTTGTGTTAGGCATATTAATGGAAAGA  780

seq1  AAAGGAGCAAATTTTTAATTGAATTATCAAGAAATAAGCATCACACCACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGCAAATTTTTAATTGAATTATCAAGAAATAAGCATCACACCACA  830

seq1  TATCTATGTGCATTTATATGCATATATGTATGAACTTGTTTGTGAAAAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATGTGCATTTATATGCATATATGTATGAACTTGTTTGTGAAAAAA  880

seq1  ATGTGCTACTTTCACGGCTTTGAAAATAATTTTATTTTTTCCATTTCTAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTACTTTCACGGCTTTGAAAATAATTTTATTTTTTCCATTTCTAT  930

seq1  AGATTTCTCAACAATGATGAGCATCCATTACATATAAAAAGGAACATATC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTCAACAATGATGAGCATCCATTACATATAAAAAGGAACATATC  980

seq1  TTAAGTAATATATTTAAAGTCCGCATATCTGATTCTAGACAGCAGATCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAATATATTTAAAGTCCGCATATCTGATTCTAGACAGCAGATCTT  1030

seq1  TTCACACAAGCTTCATTGAACTAAAATTCTTGCCATTATGTGGGAATCAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACAAGCTTCATTGAACTAAAATTCTTGCCATTATGTGGGAATCAT  1080

seq1  ATTGTAGTTCTTATATTTTCCAGAATATGTCATAGCACTGATTACATACA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGTTCTTATATTTTCCAGAATATGTCATAGCACTGATTACATACA  1130

seq1  GTCAGGATAGAATTC  1161
      |||||||||||||||
seq2  GTCAGGATAGAATTC  1145