MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-065M16
Chromosome	3 (Build37)
Map Location	21,577,310 - 21,578,383
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG665094, LOC100040325
Downstream gene	7530428D23Rik, LOC100039465, LOC100040353, Tbl1xr1, LOC545506, LOC675593, LOC100040378
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG665094 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665094 MGI:3647006
definition	note : predicted gene, EG665094 pseudo : _no_value

name	LOC100040325 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	7530428D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319506 MGI:2442162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100039465 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040353 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs

name	Tbl1xr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81004 MGI:2441730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545506 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 145 ESTs, 14 Proteins pseudo : _no_value

name	LOC675593 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins pseudo : _no_value

name	LOC100040378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040325 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250842 GeneID:100040325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040325 transcript_id : XM_001474503.1

name	7530428D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369445 GeneID:319506 MGI:2442162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 7530428D23 gene transcript_id : XM_887943.2

name	LOC100039465 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250813 GeneID:100039465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039465 transcript_id : XM_001472980.1

name	LOC100040353 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250844 GeneID:100040353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs product : similar to splicing coactivator subunit SRm300 transcript_id : XM_001474539.1

name	Tbl1xr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130978338 GeneID:81004 MGI:2441730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transducin (beta)-like 1X-linked receptor 1 transcript_id : NM_030732.3

name	LOC100040378 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250846 GeneID:100040378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040378 transcript_id : XM_001474577.1

name	LOC100040325 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250843 GeneID:100040325
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474553.1

name	7530428D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369446 GeneID:319506 MGI:2442162
definition	codon_start : 1 product : hypothetical protein LOC319506 protein_id : XP_893036.2

name	LOC100039465 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250814 GeneID:100039465
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473030.1

name	LOC100040353 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250845 GeneID:100040353
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474589.1

name	Tbl1xr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543001 CCDS:CCDS17266.1 GeneID:81004 MGI:2441730
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : nuclear receptor corepressor/HDAC3 complex subunit TBLR1; F-box-like/WD repeat protein TBL1XR1; TBL1-related protein 1 product : IRA1 protein protein_id : NP_109657.2

name	LOC100040378 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250847 GeneID:100040378
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474627.1

name	LOC545506 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250815 GeneID:545506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 145 ESTs, 14 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_031007.1

name	LOC675593 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250816 GeneID:675593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins product : similar to spindlin pseudo : _no_value transcript_id : XR_031023.1

clone name	MSMg01-471C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500A13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-291F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367I23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-491G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name		B6Ng01-065M16.g
ACC		DH885164
length		1,058
definition		DH885164\|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M16, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence		gaattctactcatcagtaaaagtctgacaatgaagatcaaccatcagtag actatggctgctggagtgaagctgttagcattctcttgtagaagtaaggg gtgcctcacaaaaccctcacctaagattcttgtcaccatttctttctgct tttactccctttgcatatagtatgcagaatgctgactttctggttgtgca gctatctgccagtcatctcgaatcctgtaattaacctccataaattgttt gccaatctgacttgagagaacctttctttttatgagtcatctccttccat actttgggtgaaccaaaatttctttcctgtctccacaggtaagacatatg acactgtctacattaaggtttgttgagaatatggagcaactagaactctc ataaactcactgctggtcagaataggaaaatcatatgatgtttctaaaag ctgatgtttcttatgatagaacactcactgtatgattgagccacagagtt taaatacatgcttatgtaaatataatgatagcttatatacacacacaaga ttcactcatggattatcttagcagcttcttctgtaatagtgccaaactgg aagcaatcaattgtctaccaacagagccttgaatggttttatgatgaatc tatatgcaacaatttcccagaactacaataacaaaatactaaacatgagt agcaacactggaggctagaagtttgaaatcaagctattaattcttttcct ttcttctagctgctttcttggcttgctgatgtcctgtgtcctcccatgct accctgaccatgtcaatgattgtacttacttcaatgtgtgtttgcaaacc ttttctaaaccatagtatttgattacctggctgagggcatgctcaaagcc actcacatattacacactatgtagattggagacatcctactgtaattagg attgtgacaatttccagtgtgcatcctgggaaaaaataaaattgacccag ttgactcagaaatatatgaccacagggtaacagaaccttcatggatcttt tattcctt
quality values		Open. Hide. 50 47 52 47 12 17 20 12 12 10 7 7 8 5 7 31 50 49 50 50 55 47 61 55 61 61 61 55 52 55 61 61 61 61 55 49 49 61 55 55 61 61 59 61 61 61 59 52 52 39 41 41 41 28 49 52 59 52 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 43 55 59 59 61 61 61 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 50 55 55 50 55 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 50 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 45 61 61 61 61 53 53 53 47 53 47 61 53 47 47 53 61 50 52 61 61 47 61 61 53 61 61 52 61 53 61 61 53 53 57 57 53 53 53 50 42 57 57 57 57 53 53 57 53 57 57 50 53 45 50 53 47 42 47 53 53 57 53 52 57 53 50 50 40 45 50 57 42 53 53 53 45 53 40 57 50 52 28 53 53 50 57 53 57 42 47 53 53 39 32 32 52 50 53 53 53 57 45 53 33 45 53 53 57 41 17 37 52 53 57 37 32 41 38 50 45 53 52 34 53 42 47 47 45 53 53 53 57 34 33 38 24 52 36 50 43 26 52 52 52 39 50 45 42 43 43 22 50 50 38 31 57 30 50 53 45 50 52 36 34 37 57 41 22 57 57 42 50 30 33 50 42 25 32 52 39 53 50 45 40 40 39 33 32 42 40 42 24 35 41 57 42 52 57 35 26 38 57 28 36 44 37 35 7 36 53 50 21 53 28 57 57 38 52 42 42 26 10 57 53 53 24 31 40 37 37 44 25 37 42 27 36 52 15 37 36 52 52 14 5 18 23 35 27 24 33 48 27 37 57 38 26 35 57 52 37 42 18 27 33 37 37 33 37 39 32 33 29 23 29 37 57 57 33 31 32 40 57 48 41 37 28 37 20 24 31 41 37 37 32 37 57 46 23 26 21 32 33 18 18 17 29 24 25 29 34 22 33 30 31 30 28 48 20 36 27 32 27 27 34 48 33 14 26 38 27 29 25 34 51 23 22 29 28 33 25 12 19 29 23 15 7 7 18 39 35 25 23 36 14 28 34 6 51 34 28 20 29 29 29 7 11 29 10 29 23 29 28 51 27 29 38 9 43 11 14 33 19 51 51 29 28 28 20 51 12 15 30 14 29 25 17 16 28 18 46 33 19 23 19 35 23 31 23 21 33 10 11 29 17 29 6 51 28 23 22 27 36 27 29 27 23 51 46 22 33 28 23 28 28 31 22 28 16 24 16 29 12 24 21 14 12 36 12 24 23 28 28 20 25 12 27 8 24 26 25 30 15 28 19 14 29 27 34 31 29 20 17 29 14 36 22 11 9 40 6 6 22 11 13 7 4 5 5 11 23 18 19 38 28 16 26 8 20 6 26 7 5 5 8 38 14 17 21 9 5 6 9 51 51 38 29 23 8 4 4 4 7 5 11 6 11 18 34 23 9 10 35 5 6 35 10 7 8 5 8 20 44 8 12 7 7 6 27 16 13 8 8 7 15 7 27 44 11 4 26 7 5 15 4 3 4 3 6 7 6 8 10 14 9 8 12 13 26 18 33 30 11 6 19 20 11 13 18 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_21577310_21578383
seq2: B6Ng01-065M16.g_70_1127 (reverse)

seq1  AAGGAAATAAAAGATCATAGAAGGTTTCTTGTTTCCCTGTGGTCATATAT  50
      |||| |||||||||||   |||||||   |||| ||||||||||||||||
seq2  AAGG-AATAAAAGATCCATGAAGGTT--CTGTTACCCTGTGGTCATATAT  47

seq1  TTCTGAGTTCAACTTGGGTCAATATCTATTTTTTTCCTCAGGAATGCACA  100
      ||||||| ||||| ||||||||| | ||||||||  | |||| |||||||
seq2  TTCTGAG-TCAAC-TGGGTCAAT-TTTATTTTTT--CCCAGG-ATGCACA  91

seq1  CCTGGAAATTTGTCACAATCTTATTTACAGTAGGATGTCTCCAATCTACA  150
       ||||||| ||||||||||| || ||||||||||||||||||||||||||
seq2  -CTGGAAA-TTGTCACAATCCTAATTACAGTAGGATGTCTCCAATCTACA  139

seq1  TAGTTGTGTAATATGTGAGTGGCTTTTGAGCATGCCCTCAGCCAGGTAAT  200
      ||| ||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAG-TGTGTAATATGTGAGTGGC-TTTGAGCATGCCCTCAGCCAGGTAAT  187

seq1  CAAATACTATGGGTTTAGAAAAGGTTTGGCAAACACACATTGAAGTAAGT  250
      |||||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  CAAATACTAT-GGTTTAGAAAAGGTTT-GCAAACACACATTGAAGTAAGT  235

seq1  ACAATCATTGACATGGTCAGGGTAGCATGGGAGGACACAGGACATCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCATTGACATGGTCAGGGTAGCATGGGAGGACACAGGACATCAGCA  285

seq1  AGCCAAGAAAAGCAGCTAGAAGAAAGGAAAAGAATTAATAGCTTGATTTC  350
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAG-AAAGCAGCTAGAAGAAAGGAAAAGAATTAATAGCTTGATTTC  334

seq1  AAACTTCTAGCCTCCAGTGTTGCTACTCATGTTTAGTATTTTGTTATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTAGCCTCCAGTGTTGCTACTCATGTTTAGTATTTTGTTATTGT  384

seq1  AGTTCTGGGAAATTGTTGCATATAGATTCATCATAAAACCATTCAAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGGAAATTGTTGCATATAGATTCATCATAAAACCATTCAAGGCT  434

seq1  CTGTTGGTAGACAATTGATTGCTTCCAGTTTGGCACTATTACAGAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGTAGACAATTGATTGCTTCCAGTTTGGCACTATTACAGAAGAAG  484

seq1  CTGCTAAGATAATCCATGAGTGAATCTTGTGTGTGTATATAAGCTATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAGATAATCCATGAGTGAATCTTGTGTGTGTATATAAGCTATCAT  534

seq1  TATATTTACATAAGCATGTATTTAAACTCTGTGGCTCAATCATACAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTACATAAGCATGTATTTAAACTCTGTGGCTCAATCATACAGTGA  584

seq1  GTGTTCTATCATAAGAAACATCAGCTTTTAGAAACATCATATGATTTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTATCATAAGAAACATCAGCTTTTAGAAACATCATATGATTTTCC  634

seq1  TATTCTGACCAGCAGTGAGTTTATGAGAGTTCTAGTTGCTCCATATTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGACCAGCAGTGAGTTTATGAGAGTTCTAGTTGCTCCATATTCTC  684

seq1  AACAAACCTTAATGTAGACAGTGTCATATGTCTTACCTGTGGAGACAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCTTAATGTAGACAGTGTCATATGTCTTACCTGTGGAGACAGGA  734

seq1  AAGAAATTTTGGTTCACCCAAAGTATGGAAGGAGATGACTCATAAAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTTTGGTTCACCCAAAGTATGGAAGGAGATGACTCATAAAAAGA  784

seq1  AAGGTTCTCTCAAGTCAGATTGGCAAACAATTTATGGAGGTTAATTACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCTCTCAAGTCAGATTGGCAAACAATTTATGGAGGTTAATTACAG  834

seq1  GATTCGAGATGACTGGCAGATAGCTGCACAACCAGAAAGTCAGCATTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCGAGATGACTGGCAGATAGCTGCACAACCAGAAAGTCAGCATTCTG  884

seq1  CATACTATATGCAAAGGGAGTAAAAGCAGAAAGAAATGGTGACAAGAATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTATATGCAAAGGGAGTAAAAGCAGAAAGAAATGGTGACAAGAATC  934

seq1  TTAGGTGAGGGTTTTGTGAGGCACCCCTTACTTCTACAAGAGAATGCTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTGAGGGTTTTGTGAGGCACCCCTTACTTCTACAAGAGAATGCTAA  984

seq1  CAGCTTCACTCCAGCAGCCATAGTCTACTGATGGTTGATCTTCATTGTCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCACTCCAGCAGCCATAGTCTACTGATGGTTGATCTTCATTGTCA  1034

seq1  GACTTTTACTGATGAGTAGAATTC  1074
      ||||||||||||||||||||||||
seq2  GACTTTTACTGATGAGTAGAATTC  1058

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information