BAC Information

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BAC

Clone NameB6Ng01-065M22
Chromosome3 (Build37)
Map Location 41,059,234 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065M22.bB6Ng01-065M22.g
ACCDH885173DH885174
length1,122936
definitionDH885173|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M22, 5' end.DH885174|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgcttttcctgcatctaacgagatgatcatgtggatgttatccct
gtgccctctagtgagtctggctaagggtttatctatcttgttgattttct
caaagaaccaactccacatttggttaattctttgaatagttcttcttgat
tccacttggttgatttcacccctgagtttgattatttcctgctgtctact
cctcttgggtgaatttgcttcctttttttctagagattttagatgtgttg
tcaagctgctagtgtgtgctctctccagtttctttttggaggcactcaga
gttatgagtttccctcttagaaatgctttcattgtgtcccataggtttgg
gtatgttgtggcttcattttcattaaactctaaaaagtctttaatttctt
tctttattccttccttgaccaaggtatcattgagaagagtgttgttcatt
ttccatgtgaatgttggctttccattgtttatgttgttattgaagatcag
ccttagtcaatggtggtctgataggatgcatgggacaatttcaatatttt
tgtatctgttgaggcctgttttgtgaccaattatatggtcaatttttgcg
aaggtcccgtgaggtgctgagaagaaggtatatccttttgttttaggata
aaatggtctgtagatatctgttaagtccatttgtttcataacttctgtta
gtttcactgtgtccctttttggtttctgtttccacgatctggccattgat
gaaagtggtgtattgaaatctcccactattattgtgtgaggtgcatgtgt
gctttgagctttactaaagtttctttaatgaatgtggctgcccttgcatt
tggagcatagatttgagactgagagttcctctggaggatttacctttgat
gagtatgaagtgtccctcctgtgtttttgatacttgggtggaaatcattt
tacccggtattagatggctactcaggctgctttccaccaatttgctggga
aattgttttcctgccttcactctgaggaatgtctgtctttcctgaaatgg
gttcctggtgacgcacgaaagt
gaattctttgtttagctctgagaaccattttttaatggggttatttgatt
ttctggagtacaccttcctgagttctttatatatattggatattagtccc
ctatctgatttagtataggtaaagatcctttcccaatctgttggtggcca
ttttgtcttatttgtggtgtcttttgccttacagaagctttgcaatttta
tgaggtcccatttgttaattctctttcttatggcattggccactgctgtt
ctattcaggaattttccccctgtgcccatatcttcgatgcttttccccac
tttctcctctatatgtttcagtatctctggttttatgtgtagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcaattcgc
attcttctacatgataacctccacttgtgccagcaccatttgttgaaaat
tctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccatggtagtgtgggttcatttctgggtcttcaattctattacattgg
tctacttgtttgtcactataccagtaccatgcagtttttatcacaattgc
tctgtaataaaactttaggtcaggcatggtgattccaacagaggttcttt
tatccttgagaagaatttttgctatcctcggttttttgttattccagatg
aatatgccgattgccctttctaattcattgaagaattgagttggaatttg
atggggattgcattgaatatgtagattgctttaggcaagatagccaattt
tactatattgatcctgccaatccatgaacatgggagatttttccatgtct
gtgatcttctttatttctttctttagagacttgaagttcttatcatacag
atctttcccttccctagagtcacaccaaggtatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059234_41059737
seq2: B6Ng01-065M22.g_70_574 (reverse)

seq1  ATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAA  50
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAAAAA  50

seq1  GACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAG  100
      ||||| |||||||||||||||||||||||||| |||  ||||||||||||
seq2  GACAGAATTTTCAACAAATGGTGCTGGCACAAGTGGAGGTTATCATGTAG  100

seq1  AAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTA  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGAATGCGAATTGATCCATTCCTATCTCCTTGTACTAAGGTCAAATCTA  150

seq1  AGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACTTATAGAG  200
      |||||||||||||||  |||||||||||||||| |||||||| |||||||
seq2  AGTGGATCAAGGAACTACACATAAAACCAGAGATACTGAAACATATAGAG  200

seq1  GAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCT  250
      |||||||||||||||||| | |||||||||| |||||||| |||||||||
seq2  GAGAAAGTGGGGAAAAGCATCGAAGATATGGGCACAGGGGGAAAATTCCT  250

seq1  GCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGG  300
      | ||||||||||| ||||   |||  |||||  ||||||  |||||||||
seq2  GAATAGAACAGCAGTGGCCAATGCCATAAGAAAGAGAATTAACAAATGGG  300

seq1  ACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAG  350
      ||||||| ||| ||||||||||||| |||||||||||||||   ||||||
seq2  ACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACACCACAAATAAG  350

seq1  ACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATC  399
      |||||| || |||||||||||||||||||||||||||||||| |||||||
seq2  ACAAAATGGCCACCAACAGATTGGGAAAGGATCTTTACCTATACTAAATC  400

seq1  AGATAGGGGACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGATT  449
      |||||||||||||||||||||||||||| ||||||||| ||||||| | |
seq2  AGATAGGGGACTAATATCCAATATATATAAAGAACTCAGGAAGGTGTACT  450

seq1  CCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAA  499
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  CCAGAAAATCAAATAACCCCATTAAAAAATGGTTCTCAGAGCTAAACAAA  500

seq1  GAATT  504
      |||||
seq2  GAATT  505