BAC Information

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BAC

Clone NameB6Ng01-066P01
Chromosome3 (Build37)
Map Location 63,943,736 - 64,080,913
singlet/doubletdoublet
Overlap gene4930518C23Rik, LOC380739, EG637004
Upstream geneLOC666967, Mme, Plch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544
Downstream geneEG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110, Kcnab1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066P01.bB6Ng01-066P01.g
ACCDH885977DH885978
length721812
definitionDH885977|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P01, 5' end.DH885978|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,080,195 - 64,080,913)(63,943,736 - 63,944,546)
sequence
gaattcatgtatagccaaaaacctttatatttacttctttctaatgtctt
ttagaaactcttaggaaagaagaataacataaatcttctattttataatt
tgatataaagaaaaaattatattttgtcataatattaatttacttgtggt
ggaatcgaggaatgagaagatccaagtaacaagattttatatgatatgaa
ttcactaaacatcagaagtaaccattccttcctgaaaagatttgatccta
aaaaaattattagatgaatcatctgtttgagggttagaaaggaaaataca
aatattagaaagtaggacaagagataaaaatgagataggaaaacagaaca
caggaataatacagtgtaaatgaagaaacaattgggttgtgggtgttata
gatcatcacactggaagtgatgccttaagatcatgagactggattgaaga
gaagataaaatatttaggatacatgttagtaattacaggatatgttacag
gaaagatacatgaaggagtgtcaggaatatgtgctcacttaatttccatg
cttaggtcttcataaatgcaaagagcaaaggaggactactgaggtagtga
ggaagacatgctttttcatttttctgacattgtacgttaaaaagagattt
ctgataactttgtaggacaagagtgtttactcttctgatttgactagtca
tatatttcatgtcactcaatt
gaattccattttttgatatggtatcttgtaggagacagcagtagggacag
aagttttcctgcaggtcggaatcctatcatgaacatttcctcaaacacaa
agcagttcccagactgctcacttgaacttgagcttgtaaacaattaacag
tgaagctgcagcacactgtgcagcacctgtgctactaaaaactcagtgtt
cacactcaccaacaaaggtcttctgaacatgtagattctcttctgcagat
gtagtatgcaacccctggttccatatgtctaagaagcttttagatactgc
tgctggtggtcaaccaagaaccctcttaggaataactttctgagaaccaa
ccacagaaaacctctccctctataaactttaacaaagtcagaaaaagcca
gatattaagaacgtgaactggaaaccaggctccatgctaaccagtctttt
caggccacccagattaatgtgaaaaaagaaaaaaagatttctcaatcact
tacccctcgcacatggctgatacgggtacttcgtcagagttatttgttgg
gatggttctagagtgaataggaaatagtcctccaataaccatagaatggt
tttcagcttctacatatccagacaaattgaacttgcgcagcaatttgcat
gtcacattctcttgagcatgtaattcaacccatagaaatacagttaaccc
cagaatcaagcacatctttctgctggccatttttaatatggtgagtttga
gaaaaatgaaagtgttgaagtgacacaggttttaaagaagcaccttgatg
gagtgttgaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64080195_64080913
seq2: B6Ng01-066P01.b_41_760 (reverse)

seq1  ATTGAGTGACATGAAATATATGACTAGTCAAATCAGAAGAGTAAACACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTGACATGAAATATATGACTAGTCAAATCAGAAGAGTAAACACTC  50

seq1  TTGTCCTACAAAGTTATCAGAAATCTCTTTTTAACGTACAATGTCAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTACAAAGTTATCAGAAATCTCTTTTTAACGTACAATGTCAGAAA  100

seq1  AATG-AAAAGCATGTCTTCCTCACTACCTCAGTAGTCCTCCTTTGCTCTT  149
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAAAGCATGTCTTCCTCACTACCTCAGTAGTCCTCCTTTGCTCTT  150

seq1  TGCATTTATGAAGACCTAAGCATGGAAATTAAGTGAGCACATATTCCTGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTATGAAGACCTAAGCATGGAAATTAAGTGAGCACATATTCCTGA  200

seq1  CACTCCTTCATGTATCTTTCCTGTAACATATCCTGTAATTACTAACATGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTTCATGTATCTTTCCTGTAACATATCCTGTAATTACTAACATGT  250

seq1  ATCCTAAATATTTTATCTTCTCTTCAATCCAGTCTCATGATCTTAAGGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAAATATTTTATCTTCTCTTCAATCCAGTCTCATGATCTTAAGGCA  300

seq1  TCACTTCCAGTGTGATGATCTATAACACCCACAACCCAATTGTTTCTTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCCAGTGTGATGATCTATAACACCCACAACCCAATTGTTTCTTCA  350

seq1  TTTACACTGTATTATTCCTGTGTTCTGTTTTCCTATCTCATTTTTATCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACTGTATTATTCCTGTGTTCTGTTTTCCTATCTCATTTTTATCTC  400

seq1  TTGTCCTACTTTCTAATATTTGTATTTTCCTTTCTAACCCTCAAACAGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTACTTTCTAATATTTGTATTTTCCTTTCTAACCCTCAAACAGAT  450

seq1  GATTCATCTAATAATTTTTTTAGGATCAAATCTTTTCAGGAAGGAATGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATCTAATAATTTTTTTAGGATCAAATCTTTTCAGGAAGGAATGGT  500

seq1  TACTTCTGATGTTTAGTGAATTCATATCATATAAAATCTTGTTACTTGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTGATGTTTAGTGAATTCATATCATATAAAATCTTGTTACTTGGA  550

seq1  TCTTCTCATTCCTCGATTCCACCACAAGTAAATTAATATTATGACAAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCATTCCTCGATTCCACCACAAGTAAATTAATATTATGACAAAAT  600

seq1  ATAATTTTTTCTTTATATCAAATTATAAAATAGAAGATTTATGTTATTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTTCTTTATATCAAATTATAAAATAGAAGATTTATGTTATTCT  650

seq1  TCTTTCCTAAGAGTTTCTAAAAGACATTAGAAAGAAGTAAATATAAAGGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTAAGAGTTTCTAAAAGACATTAGAAAGAAGTAAATATAAAGGT  700

seq1  TTTTGGCTATACATGAATTC  719
      ||||||||||||||||||||
seq2  TTTTGGCTATACATGAATTC  720

seq1: chr3_63943736_63944546
seq2: B6Ng01-066P01.g_72_883

seq1  GAATTCCATTTTTTGATATGGTATCTTGTAGGAGACAGCAGTAGGGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTTTTGATATGGTATCTTGTAGGAGACAGCAGTAGGGACAG  50

seq1  AAGTTTTCCTGCAGGTCGGAATCCTATCATGAACATTTCCTCAAACACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTCCTGCAGGTCGGAATCCTATCATGAACATTTCCTCAAACACAA  100

seq1  AGCAGTTCCCAGACTGCTCACTTGAACTTGAGCTTGTAAACAATTAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTCCCAGACTGCTCACTTGAACTTGAGCTTGTAAACAATTAACAG  150

seq1  TGAAGCTGCAGCACACTGTGCAGCACCTGTGCTACTAAAAACTCAGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTGCAGCACACTGTGCAGCACCTGTGCTACTAAAAACTCAGTGTT  200

seq1  CACACTCACCAACAAAGGTCTTCTGAACATGTAGATTCTCTTCTGCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCACCAACAAAGGTCTTCTGAACATGTAGATTCTCTTCTGCAGAT  250

seq1  GTAGTATGCAACCCCTGGTTCCATATGTCTAAGAAGCTTTTAGATACTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATGCAACCCCTGGTTCCATATGTCTAAGAAGCTTTTAGATACTGC  300

seq1  TGCTGGTGGTCAACCAAGAACCCTCTTAGGAATAACTTTCTGAGAACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTGGTCAACCAAGAACCCTCTTAGGAATAACTTTCTGAGAACCAA  350

seq1  CCACAGAAAACCTCTCCCTCTATAAACTTTAACAAAGTCAGAAAAAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAAAACCTCTCCCTCTATAAACTTTAACAAAGTCAGAAAAAGCCA  400

seq1  GATATTAAGAACGTGAACTGGAAACCAGGCTCCATGCTAACCAGTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAAGAACGTGAACTGGAAACCAGGCTCCATGCTAACCAGTCTTTT  450

seq1  CAGGCCACCCAGATTAATGTGAAAAAAGAAAAAAAGATTTCTCAATCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCACCCAGATTAATGTGAAAAAAGAAAAAAAGATTTCTCAATCACT  500

seq1  TACCCCTCGCACATGGCTGATACGGGTACTTCGTCAGAGTTATTTGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTCGCACATGGCTGATACGGGTACTTCGTCAGAGTTATTTGTTGG  550

seq1  GATGGTTCTAGAGTGAATAGGAAATAGTCCTCCAATAACCATAGAATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTCTAGAGTGAATAGGAAATAGTCCTCCAATAACCATAGAATGGT  600

seq1  TTTCAGCTTCTACATATCCAGACAAATTGAACTTGCGCAGCAATTTGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCTTCTACATATCCAGACAAATTGAACTTGCGCAGCAATTTGCAT  650

seq1  GTCACATTCTCTTGAGCATGTAATTCAACCCATAGAAATACAGTTAACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATTCTCTTGAGCATGTAATTCAACCCATAGAAATACAGTTAACCC  700

seq1  CAGAATCAAGCACATCTTTCTGCTGGCCA-TTTTAATATGGTGAGTTTGA  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGAATCAAGCACATCTTTCTGCTGGCCATTTTTAATATGGTGAGTTTGA  750

seq1  GAAAAATGAAAGTGTTGAAGTGACACAGGTTTTAAGGAAGCACCTTGATG  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAAAAATGAAAGTGTTGAAGTGACACAGGTTTTAAAGAAGCACCTTGATG  800

seq1  GAGTGTTGAAGT  811
      ||||||||||||
seq2  GAGTGTTGAAGT  812