BAC Information

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BAC

Clone NameB6Ng01-067G04
Chromosome3 (Build37)
Map Location 106,289,405 - 106,290,578
singlet/doubletsinglet
Overlap geneDennd2d
Upstream geneKcnd3, Ddx20, 6530418L21Rik, Rap1a, EG433637, Adora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819, LOC100043129, Chia, Chi3l3, Chi3l4, EG624696, BC051070, 2010016I18Rik
Downstream geneCept1, Tmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266, Kcna3, AI504432, Kcna2, Kcna10, Gm131, A630076J17Rik, Prok1, Hbxip, Slc16a4, Rbm15, LOC383901, Kcnc4, Slc6a17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067G04.bB6Ng01-067G04.g
ACCDH886290DH886291
length1,1591,266
definitionDH886290|Mus musculus domesticus DNA, BAC clone: B6Ng01-067G04, 5' end.DH886291|Mus musculus domesticus DNA, BAC clone: B6Ng01-067G04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtatcctgaggatttacatattcaaaaagaagattagaaaggt
cagctggaccaacctcctgagagggtggcatcagagagaaaccacatcat
agaaaagaagcaacccttccagttgctaaaccttctaacaagagaggctg
gtaagaaggggacattacgcctcacccagtgcatgatcaggcaagaagag
atctaatactttgggagactgatcttaggctgtgcttgagtcgggggcct
gcttgattctctaccacacaaccaggaaggccatcccttcttagtagttc
cagcagaagctgagttttcctgtaggaaaaggtgactgaggtggaatttg
gaagaactgaaggtttcccacaggggcaagagcattgtttccctgctcca
gagtttcagtcagtccttcacaaagcagtcagacctagattctctgggtg
attacagaaaactagggctgggctacaaaggaaactagagcagtgagctc
agggctagagcccaggcagcgtggtaagacatagaactcctctattacct
tttaaacacaccttcgtcctcccacctccatcctcaggccccacttctcc
ctccatccttaccttgggaaactggtaagtgatcgtgggctcatagtcat
cccctaaacgctttttctttaaagaaacaacaagaaggtattcaaagaag
tgctggcctccagcaaagctagatggagaatgctcctggatcctttctgg
ctctgtgacagcttccccaggattgttctgggattgtcctaaaatggaga
tgcaagggtctcttgagtattctttccactcctccattctgtagtgcgag
cgagaatctgggcaacaaccatgcctcaaggctacagtgccaagcctgac
caggcaccaccaggcaggatcagagccaaggggcaatttccatacctgcc
ctgggaaacttgaaactgtggagtgacacaggaagaaaagaaaacactga
tgtagaaccgaggagccatgccatgctgtggaggttcttggaggcctgat
gcctgacactgtatagtctgcctgatgcaacagttctgggtattttgtgg
ccctgagtaattgcactaatatcaagagacctaggcattttgtattatag
caagacctc
gaattcaacacaccactttcatcaatggacagatcatggaaacagaaata
aacagggacacagtgaaactaacagaagtgatgaaacaaatggttttaac
agatacctacagaacattttatcctaaaacaaaaggatataccttcttct
tagcacctcatggtaccttctccaaaactaaccatataagtggtcacaaa
accagcctcaacagattaaaaaatattgaaattgtcccatgcatgctatc
agatcaccatggactaaggctgctcttcaataacaaaataaatgatagaa
agctaacattcacgtggaaactgaacaacactatcctcaatgataccttg
gtcaaggacgaaataaagaaattaaatactttttagagtttaatgaaaat
taagccacaacatacccaaatttatgagacacaatgaaagcatttctaag
aggaaaactcacagttctgagtgcctcccaaaagaaactagagagagaac
acactagcagcttgacaacacacctaaaagctgtagaacaaaaggaagta
aattcacccaagaggagtagatggcaggaaataatcaaactcaggggcaa
aatcaaccaagtggaaacaagaagaactctattcaaagaaccaaacaaac
caggagctggttctttgagaaaatcaacaagatagataaaaccttagcca
gacacactagagggcacaaggacagcatcctaattaacaaaatcagaaat
gaaaagggagacataacaacatatgatgaagaaattcaaaatgccatcag
atccttctacaaaaggctattctcaagaaaactggaaaatctggatgaaa
tgaaaaatttcgagacagataccaggaaccaaagataaatcaggatcagg
ttaatgatctaaacagtcctatatccctaaagaaatagaagcagtcatta
gtagctcccaaccaaaaaagcccatgatcagatgggtttagtgcagagtc
tatcacacttcaagagatctaattcccgtcttcacaaactattccacata
taaagcagagtacctttcccaatttattctatgaacataatatctcatac
ctaatccgaaagaccaaaagaatgagaactcgaacaatttcccttagaat
attatgcaatactcaataattctccttacgaatggaaacattcaaacaca
tctctgtcaagatggtaccctggtcatggtgtagattaatatggaatctc
tcatgtgtaacactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_106289405_106290578
seq2: B6Ng01-067G04.b_44_1202 (reverse)

seq1  GAGGTCTTGCTATAATTACCAAAAAATGCCCTATGGGTCTACTCTGATTA  50
      ||||||||||||||||    | ||||||||   | ||||| || ||||  
seq2  GAGGTCTTGCTATAAT----ACAAAATGCC---TAGGTCT-CT-TGAT--  39

seq1  TTTAGTGCAAATTTACTCAGGGCTCACAAAATACCCAGAACTGTTGCATC  100
       |||||||||  ||||||||||| ||||||||||||||||||||||||||
seq2  ATTAGTGCAA--TTACTCAGGGC-CACAAAATACCCAGAACTGTTGCATC  86

seq1  AGGCAGACTATACAGTGTCAGGCATCAGGCCTCCAAGAACCTCCACAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACTATACAGTGTCAGGCATCAGGCCTCCAAGAACCTCCACAGCA  136

seq1  TGGCATGGCTCCTCGGTTCTACATCAGTGTTTTCTTTTCTTCCTGTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGGCTCCTCGGTTCTACATCAGTGTTTTCTTTTCTTCCTGTGTCA  186

seq1  CTCCACAGTTTCAAGTTTCCCAGGGCAGGTATGGAAATTGCCCCCTTGGC  250
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTCCACAGTTTCAAGTTTCCCAGGGCAGGTATGGAAATTG-CCCCTTGGC  235

seq1  TCTGATCCTGCCTGGTGGTGCCTGGTCAGGCTTGGCACTGTAGCCTTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCCTGCCTGGTGGTGCCTGGTCAGGCTTGGCACTGTAGCCTTGAG  285

seq1  GCATGGTTGTTGCCCAGATTCTCGCTCGCACTACAGAATGGAGGAGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTTGTTGCCCAGATTCTCGCTCGCACTACAGAATGGAGGAGTGGA  335

seq1  AAGAATACTCAAGAGACCCTTGCATCTCCATTTTAGGACAATCCCAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATACTCAAGAGACCCTTGCATCTCCATTTTAGGACAATCCCAGAAC  385

seq1  AATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCC  435

seq1  ATCTAGCTTTGCTGGAGGCCAGCACTTCTTTGAATACCTTCTTGTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGCTTTGCTGGAGGCCAGCACTTCTTTGAATACCTTCTTGTTGTTT  485

seq1  CTTTAAAGAAAAAGCGTTTAGGGGATGACTATGAGCCCACGATCACTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAGAAAAAGCGTTTAGGGGATGACTATGAGCCCACGATCACTTAC  535

seq1  CAGTTTCCCAAGGTAAGGATGGAGGGAGAAGTGGGGCCTGAGGATGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCCCAAGGTAAGGATGGAGGGAGAAGTGGGGCCTGAGGATGGAGG  585

seq1  TGGGAGGACGAAGGTGTGTTTAAAAGGTAATAGAGGAGTTCTATGTCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGACGAAGGTGTGTTTAAAAGGTAATAGAGGAGTTCTATGTCTTA  635

seq1  CCACGCTGCCTGGGCTCTAGCCCTGAGCTCACTGCTCTAGTTTCCTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCTGCCTGGGCTCTAGCCCTGAGCTCACTGCTCTAGTTTCCTTTGT  685

seq1  AGCCCAGCCCTAGTTTTCTGTAATCACCCAGAGAATCTAGGTCTGACTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGCCCTAGTTTTCTGTAATCACCCAGAGAATCTAGGTCTGACTGC  735

seq1  TTTGTGAAGGACTGACTGAAACTCTGGAGCAGGGAAACAATGCTCTTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAAGGACTGACTGAAACTCTGGAGCAGGGAAACAATGCTCTTGCC  785

seq1  CCTGTGGGAAACCTTCAGTTCTTCCAAATTCCACCTCAGTCACCTTTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGGAAACCTTCAGTTCTTCCAAATTCCACCTCAGTCACCTTTTCC  835

seq1  TACAGGAAAACTCAGCTTCTGCTGGAACTACTAAGAAGGGATGGCCTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAAAACTCAGCTTCTGCTGGAACTACTAAGAAGGGATGGCCTTCC  885

seq1  TGGTTGTGTGGTAGAGAATCAAGCAGGCCCCCGACTCAAGCACAGCCTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGTGGTAGAGAATCAAGCAGGCCCCCGACTCAAGCACAGCCTAA  935

seq1  GATCAGTCTCCCAAAGTATTAGATCTCTTCTTGCCTGATCATGCACTGGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTCTCCCAAAGTATTAGATCTCTTCTTGCCTGATCATGCACTGGG  985

seq1  TGAGGCGTAATGTCCCCTTCTTACCAGCCTCTCTTGTTAGAAGGTTTAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCGTAATGTCCCCTTCTTACCAGCCTCTCTTGTTAGAAGGTTTAGC  1035

seq1  AACTGGAAGGGTTGCTTCTTTTCTATGATGTGGTTTCTCTCTGATGCCAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAAGGGTTGCTTCTTTTCTATGATGTGGTTTCTCTCTGATGCCAC  1085

seq1  CCTCTCAGGAGGTTGGTCCAGCTGACCTTTCTAATCTTCTTTTTGAATAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGGAGGTTGGTCCAGCTGACCTTTCTAATCTTCTTTTTGAATAT  1135

seq1  GTAAATCCTCAGGATACTGAATTC  1174
      ||||||||||||||||||||||||
seq2  GTAAATCCTCAGGATACTGAATTC  1159