BAC Information

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BAC

Clone NameB6Ng01-068B17
Chromosome3 (Build37)
Map Location 41,059,225 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068B17.bB6Ng01-068B17.g
ACCDH886794DH886795
length1,0321,168
definitionDH886794|Mus musculus domesticus DNA, BAC clone: B6Ng01-068B17, 5' end.DH886795|Mus musculus domesticus DNA, BAC clone: B6Ng01-068B17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagccaaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaagataggtaaagatcctttcccaatctgttggtggccta
tttgtcttattgacggtatcttttgcattgcagaagctttgcaactttat
aaggtcccatttatcgattctcgatctcactgcacaagccattgctgttc
tattcaggaacttttcccctgtacccatatcttcgaggcttttccctact
ttctcctttataagtttcagtgtctctgttttatgtggagttccttaagc
cacttagattagaccttagaacaaggagataggaatggatcatttcacat
tcttctacatgataactgccagttgtgccagcaccatttgttgaaaatgc
tgtctatttttcactggatgctattagctcccttgtcaaagatcaaatga
ccataggtgtgtgagttcatctctgggtcttcaattctgttccatgatct
acttgtctgtcactataccagtaccatgcagttttaatcacaattgctct
gtagtacagctttaggtcaggcatggtgattccaccagaggttcttttat
ccttgagaagagtttttgctatcctaggttttttgttatttcagataaat
ctgccgattgctttttctaattccttgaagaattgagttagaattttgat
ggggattgcattgaatctgtagattgctattggcaagattgctattttta
caatgttgatcctgccaatccatgagcatgggagatctttccatcttctg
agatcttctttaatttccttcttcagagacttgaagttcttatcatacag
atctttcacttccttagagtcacgcccaggtattttatattatttgtgac
tattgagaaggtgttgttcccctaatttctttctcatcctgttattcttt
gtgtagagaaatccatgactgtttgagtaatt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttccgca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccctatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggaggacatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggatccagatgtagctgtctcttgtgagactatgcccggggcctagaaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctgcaccct
ataggtggacaacatatgaacttaccagtcccctagctcttgactctagc
tgctatgtttcaaagatggcctagtcgacatcactggaaggaaggccctt
gactgcaactttatatgcccagtacaggaacccaggccaacaggggggaa
tggtgtgctggtgaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059225_41059737
seq2: B6Ng01-068B17.b_47_558 (reverse)

seq1  CACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAG  50
      |||||||||||||||| |||||||| |||||||||||||| | |||||||
seq2  CACACACCTATGGTCATTTGATCTTTGACAAGGGAGCTAATAGCATCCAG  50

seq1  TGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTT  100
      || |||| |||||||||||||||||||||||||||||||||||||  |||
seq2  TGAAAAATAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGTT  100

seq1  ATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGG  150
      |||||||||||||||| ||| ||||||| |||||||||||||| ||||||
seq2  ATCATGTAGAAGAATGTGAAATGATCCATTCCTATCTCCTTGTTCTAAGG  150

seq1  TCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAA  200
      || ||||||||||| | ||||||| |||||||||| ||||||||||||||
seq2  TCTAATCTAAGTGGCTTAAGGAACTCCACATAAAA-CAGAGACACTGAAA  199

seq1  CTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGA  250
      |||||| |||||||||| ||||||||||| ||||||||||  ||||||||
seq2  CTTATAAAGGAGAAAGTAGGGAAAAGCCTCGAAGATATGGGTACAGGGGA  249

seq1  AAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAG  300
      ||| |||||| |||||||||||||||||||||| || |||| |||||| |
seq2  AAAGTTCCTGAATAGAACAGCAATGGCTTGTGCAGTGAGATCGAGAATCG  299

seq1  ACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACC  350
      | ||||||||||| || ||  |||||||||||||||| |||||||| |||
seq2  ATAAATGGGACCTTATAAAGTTGCAAAGCTTCTGCAATGCAAAAGATACC  349

seq1  GTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCTA  399
      |||||||||||||| ||| |||||||||||||||||||||||||||||||
seq2  GTCAATAAGACAAATAGGCCACCAACAGATTGGGAAAGGATCTTTACCTA  399

seq1  TCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAGA  449
      || |||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACTCAAGA  449

seq1  AGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAG  499
      |||| |  |||||||||||||||||||||||| |||||||||||||||||
seq2  AGGTTGGCTCCAGAAAATCAAATAACCCCATT-AAAAATGGGGCTCAGAG  498

seq1  CTAAACAAAGAATT  513
      ||||||||||||||
seq2  CTAAACAAAGAATT  512