BAC Information

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BAC

Clone NameB6Ng01-068F24
Chromosome3 (Build37)
Map Location 118,244,225 - 118,362,843
singlet/doubletdoublet
Overlap geneDpyd
Upstream gene4833424O15Rik, EG668759, Snx7, LOC100043260
Downstream geneLOC100043275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068F24.bB6Ng01-068F24.g
ACCDH886979DH886980
length1,1561,117
definitionDH886979|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F24, 5' end.DH886980|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,361,668 - 118,362,843)(118,244,225 - 118,245,361)
sequence
gaattcttggtgctagatagataatcaaacaaacaaaagcataaaagccc
ccaaaatagtaaggctcatcattatctttaaaggcacatgaatttttcgg
atgtggaaaaaaagattaatagaaccattgaagttcttacattaagttaa
aattcagaaaagcattcatttttaagtcataaaagcgaaagtcttctaat
attcctttggattgggagatataaaggcttttgcttgacagctacatgag
ttgatatcaaaaagagaatttggcaggggtttctgaatccataacaattg
tctattagtctgtttttaataatttttctttggcatgtaatcctctttaa
ttagattccactctctgttgtttcaagattccataaactggtgtcttata
taccagctgctgaagcaggagttactgtctaaacgatattcacaatgagt
atttaggaggtttacaattatacccttgctaataaattgtgccatttcca
caacaattttaagtgctaatcttcagaaggcattttaaaattagctaaaa
ttctgtcaagagatttacaaaaattgttagcatgaagataattatgtcac
agcccttggactccatctctgattgtgtgcataaatcagaaaatgtcagc
tgtgttttcccttaataactgcccctgcagcaatatattatagtctaaac
tcatattatcatttttgtttctcttctctaaatactagacagttgcttca
aaagtttggaactgattaaataatttcatatttcccagaatagtaactga
ttatcagttacaaaattgtaagtatcagcattaagtgcatttaatatgga
agggataacaaatttcccatgaactctatattaaagagcaaaacatgtca
atgcaaactgtttttaaaatatttatagataaaactcaactgtacccagt
tgtacacaaacaaagtaaaacttcaaataaactaaaatatacagattttt
atttcaggaacaaaacacagaagcaaagttttctgaagcatttaccaaac
atctagtattaggtatacgaccctatctgggattagtgagattcatcttg
agaaattaaaaaaaaaacttactattccttcttttacccatatggaaatg
acattt
gaattcacttactaataagtacacttgggtatacagacagaaattactaa
tgtcagttaaaagatctaagactccttgtaaattgcttagaaagggaaca
cgcaatagcatcttgaagctcaatgtattccaagaagtagttttaccaca
cacacacacacacacacacacacacacacacacacagacagagagagaca
gagacagagagagacacagagacagagagacagagaaacagaaagagacg
gaatgacagagagagacaagacagaaaaagcagagacacagagtaaagac
agacagacagaggaagagacagacagaattatccattatgtgaaaaggac
aaaatgacacaggagactaaaagggatctctaaatccaatgcttaaacaa
tttgagaagaactatcaattaatatgtttttttttaagcacaaaatacaa
acttacatgagatccattctgatttaaataatggacaaatggaggaggat
tagcaaagactccatgtggaaaaaccacaagtccttttgcagttactcag
tccctcagcacggagcctatttccgcagcctctggcatttctgtctctgg
aagcctccctcccttctatcatagctcagggcaagcccactcctgtatag
gcttccatgacctattcacctctcccttgatcaccgttgatctgtctctc
ttctaaacattgcatgtgggatttccgaagtgagttcaatctaaaagcac
agttcaggaaaagaaagagaaatgagaagccccacggtagagaaagctga
ctgacactgtgagcaaagcaatcaagttcccagtccacatgcagactgtc
cgtggcatttcctcttgatgtgaagctacgagaagggagatgaccctggt
ggtcttttcctgtcacagtccttaacctaccttaatcactagatcacact
gacatcagaattagcttcttcacacagacaaaatgcttataaagcagtgc
ttaaacctagattaataattgacacaacccatcagcacctgttgaaaata
ccggaatactagtctctaatgttaagtcaagaatatcattgattatctgt
tttttaagaaaatttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118361668_118362843
seq2: B6Ng01-068F24.b_45_1200 (reverse)

seq1  AAATGTCATTTATCATTATTGGGGTAAAAGGAGGGAATAGTAGTTTTTTT  50
      ||||||||||  ||  |||  |||||||| || |||||||||    ||||
seq2  AAATGTCATT--TCCATAT--GGGTAAAA-GAAGGAATAGTA--AGTTTT  43

seq1  TTTTTTAATTTCTTCCAAGATGAGATCTCACTTAATCTCCAGATAGGGTC  100
      |||||||||||||  |||||||| ||||||| ||||| ||||||||||||
seq2  TTTTTTAATTTCT--CAAGATGA-ATCTCAC-TAATC-CCAGATAGGGTC  88

seq1  GTATACCTTAATAACTAAGATGTTTGGTAAATGCTTCAGAAAACTTTGCT  150
      ||||||| |||| ||| |||||||||||||||||||||||||||||||||
seq2  GTATACC-TAAT-ACT-AGATGTTTGGTAAATGCTTCAGAAAACTTTGCT  135

seq1  TCTGTGTTTTTGTTCTTGAAATAAAAATCTGTATATTTTTAGTTTTATTT  200
      |||||| |||||||| ||||||||||||||||||| |||||| |||||||
seq2  TCTGTG-TTTTGTTCCTGAAATAAAAATCTGTATA-TTTTAG-TTTATTT  182

seq1  GAAGTTTTACTTTGGTTTGTGTACAACTGGGTACAGTTGGGTTTTTATCT  250
      ||||||||||||| ||||||||||||||||||||||||| | ||||||||
seq2  GAAGTTTTACTTT-GTTTGTGTACAACTGGGTACAGTTGAG-TTTTATCT  230

seq1  AATAAATATTTTAAAAACAGTTTGCATTGACATGTTTTGCTCTTTAATAT  300
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATAAATATTTTAAAAACAGTTTGCATTGACATGTTTTGCTCTTTAATAT  279

seq1  AGAGTTCATGGGAAATTTGTTTATCCCTTCCATATT-AATGCACTTAATG  349
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  AGAGTTCATGGGAAATTTG-TTATCCCTTCCATATTAAATGCACTTAATG  328

seq1  CTGATACTTACAATTTTGTAACTGATAATCAGTTACTATTCTGGGAAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACTTACAATTTTGTAACTGATAATCAGTTACTATTCTGGGAAATA  378

seq1  TG-AATTATTTAATCAGTTCCAAACTTTTGAAGCAACTGTCTAGTATTTA  448
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTATTTAATCAGTTCCAAACTTTTGAAGCAACTGTCTAGTATTTA  428

seq1  GAGAAGAGAAACAAAAATGATAATATGAGTTTAGACTATAATATATTGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGAAACAAAAATGATAATATGAGTTTAGACTATAATATATTGCT  478

seq1  GCAGGGGCAGTTATTAAGGGAAAACACAGCTGACATTTTCTGATTTATGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGCAGTTATTAAGGGAAAACACAGCTGACATTTTCTGATTTATGC  528

seq1  ACACAATCAGAGATGGAGTCCAAGGGCTGTGACATAATTATCTTCATGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATCAGAGATGGAGTCCAAGGGCTGTGACATAATTATCTTCATGCT  578

seq1  AACAATTTTTGTAAATCTCTTGACAGAATTTTAGCTAATTTTAAAATGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTTTGTAAATCTCTTGACAGAATTTTAGCTAATTTTAAAATGCC  628

seq1  TTCTGAAGATTAGCACTTAAAATTGTTGTGGAAATGGCACAATTTATTAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGATTAGCACTTAAAATTGTTGTGGAAATGGCACAATTTATTAG  678

seq1  CAAGGGTATAATTGTAAACCTCCTAAATACTCATTGTGAATATCGTTTAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTATAATTGTAAACCTCCTAAATACTCATTGTGAATATCGTTTAG  728

seq1  ACAGTAACTCCTGCTTCAGCAGCTGGTATATAAGACACCAGTTTATGGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAACTCCTGCTTCAGCAGCTGGTATATAAGACACCAGTTTATGGAA  778

seq1  TCTTGAAACAACAGAGAGTGGAATCTAATTAAAGAGGATTACATGCCAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAACAACAGAGAGTGGAATCTAATTAAAGAGGATTACATGCCAAA  828

seq1  GAAAAATTATTAAAAACAGACTAATAGACAATTGTTATGGATTCAGAAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTATTAAAAACAGACTAATAGACAATTGTTATGGATTCAGAAAC  878

seq1  CCCTGCCAAATTCTCTTTTTGATATCAACTCATGTAGCTGTCAAGCAAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCAAATTCTCTTTTTGATATCAACTCATGTAGCTGTCAAGCAAAA  928

seq1  GCCTTTATATCTCCCAATCCAAAGGAATATTAGAAGACTTTCGCTTTTAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTATATCTCCCAATCCAAAGGAATATTAGAAGACTTTCGCTTTTAT  978

seq1  GACTTAAAAATGAATGCTTTTCTGAATTTTAACTTAATGTAAGAACTTCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAAAAATGAATGCTTTTCTGAATTTTAACTTAATGTAAGAACTTCA  1028

seq1  ATGGTTCTATTAATCTTTTTTTCCACATCCGAAAAATTCATGTGCCTTTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCTATTAATCTTTTTTTCCACATCCGAAAAATTCATGTGCCTTTA  1078

seq1  AAGATAATGATGAGCCTTACTATTTTGGGGGCTTTTATGCTTTTGTTTGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATGATGAGCCTTACTATTTTGGGGGCTTTTATGCTTTTGTTTGT  1128

seq1  TTGATTATCTATCTAGCACCAAGAATTC  1176
      ||||||||||||||||||||||||||||
seq2  TTGATTATCTATCTAGCACCAAGAATTC  1156

seq1: chr3_118244225_118245361
seq2: B6Ng01-068F24.g_69_1185

seq1  GAATTCACTTACTAATAAGTACACTTGGGTATACAGACAGAAATTACTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTACTAATAAGTACACTTGGGTATACAGACAGAAATTACTAA  50

seq1  TGTCAGTTAAAAGATCTAAGACTCCTTGTAAATTGCTTAGAAAGGGAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTTAAAAGATCTAAGACTCCTTGTAAATTGCTTAGAAAGGGAACA  100

seq1  CGCAATAGCATCTTGAAGCTCAATGTATTCCAAGAAGTAGTTTTACCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAATAGCATCTTGAAGCTCAATGTATTCCAAGAAGTAGTTTTACCACA  150

seq1  CACACACACACACACACACACACACACACACACACAGACAGAGAGAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACAGACAGAGAGAGACA  200

seq1  GAGACAGAGAGAGACACAGAGACAGAGAGACAGAGAAACAGAAAGAGACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGAGAGACACAGAGACAGAGAGACAGAGAAACAGAAAGAGACG  250

seq1  GAATGACAGAGAGAGACAAGACAGAAAAAGCAGAGACACAGAGTAAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACAGAGAGAGACAAGACAGAAAAAGCAGAGACACAGAGTAAAGAC  300

seq1  AGACAGACAGAGGAAGAGACAGACAGAATTATCCATTATGTGAAAAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGACAGAGGAAGAGACAGACAGAATTATCCATTATGTGAAAAGGAC  350

seq1  AAAATGACACAGGAGACTAAAAGGGATCTCTAAATCCAATGCTTAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACACAGGAGACTAAAAGGGATCTCTAAATCCAATGCTTAAACAA  400

seq1  TTTGAGAAGAACTATCAATTAATATGTTTTTTTTTAAGCACAAAATACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAGAACTATCAATTAATATGTTTTTTTTTAAGCACAAAATACAA  450

seq1  ACTTACATGAGATCCATTCTGATTTAAATAATGGACAAATGGAGGAGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACATGAGATCCATTCTGATTTAAATAATGGACAAATGGAGGAGGAT  500

seq1  TAGCAAAGACTCCATGTGGAAAAACCACAAGTCCTTTTGCAGTTACTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAGACTCCATGTGGAAAAACCACAAGTCCTTTTGCAGTTACTCAG  550

seq1  TCCCTCAGCACGGAGCCTATTTCCGCAGCCTCTGGCATTTCTGTCTCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAGCACGGAGCCTATTTCCGCAGCCTCTGGCATTTCTGTCTCTGG  600

seq1  AAGCCTCCCTCCCTTCTATCATAGCTCAGGGCAAGCCCACTCCTGTATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCCCTCCCTTCTATCATAGCTCAGGGCAAGCCCACTCCTGTATAG  650

seq1  GCTTCCATGACCTATTCACCTCTCCCTTGATCACCGTTGATCTGTCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCATGACCTATTCACCTCTCCCTTGATCACCGTTGATCTGTCTCTC  700

seq1  TTCTAAACATTGCATGTGGGATTTCCGAAGTGAGTTCAATCTAAAAGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAACATTGCATGTGGGATTTCCGAAGTGAGTTCAATCTAAAAGCAC  750

seq1  AGTTCAGGAAAAGAAAGAGAAATGAGAAGCCCCACGGTAGAGAAAGCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGGAAAAGAAAGAGAAATGAGAAGCCCCACGGTAGAGAAAGCTGA  800

seq1  CTGACACTGTGAGCAAAGCAATCAAGTTCCCAGTCCACAATGCAGACTGT  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTGACACTGTGAGCAAAGCAATCAAGTTCCCAGTCCAC-ATGCAGACTGT  849

seq1  CCGTGGCATTTCCTCTTGATGTGAAGCTACGAGAAGGGGAGATGACCCTG  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCGTGGCATTTCCTCTTGATGTGAAGCTACGAGAA-GGGAGATGACCCTG  898

seq1  GTGGTCTTTTCCTGTCACAGTCCTTAACCTACCTTAATCACTAGAATCAC  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTGGTCTTTTCCTGTCACAGTCCTTAACCTACCTTAATCACTAG-ATCAC  947

seq1  ACTGACAATCAGAATTAACCTTCTCCACAACAGACAAAATGCTTATAAAA  1000
      |||||| ||||||||| | ||||| ||| ||||||||||||||||| |||
seq2  ACTGAC-ATCAGAATT-AGCTTCTTCAC-ACAGACAAAATGCTTAT-AAA  993

seq1  GCAGTGCTTAAACCCATGATTAAATAAATGACACAACCCCACCAGCACCC  1050
      |||||||||||||| | |||| ||||| |||||||| |||| ||||| ||
seq2  GCAGTGCTTAAACCTA-GATT-AATAATTGACACAA-CCCATCAGCA-CC  1039

seq1  TGTTGAAAATACCGGGAATACCTAAGTCTCCTAATGTTTAAGGTCAAGAA  1100
      ||||||||||||| |||||||   ||||| ||||||||  | ||||||||
seq2  TGTTGAAAATACC-GGAATAC--TAGTCT-CTAATGTT--AAGTCAAGAA  1083

seq1  TAATCATTGATATATCTGTTTTTTAAGGAGAATTTGG  1137
      | ||||||||| |||||||||||||| || |||||||
seq2  T-ATCATTGAT-TATCTGTTTTTTAA-GAAAATTTGG  1117