BAC Information

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BAC

Clone NameB6Ng01-068I08
Chromosome3 (Build37)
Map Location 148,554,052 - 148,703,954
singlet/doubletdoublet
Overlap geneLphn2, LOC100040368
Upstream geneLOC100040354
Downstream geneLOC668893, EG381483, LOC100040620
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068I08.bB6Ng01-068I08.g
ACCDH887083DH887084
length1,013353
definitionDH887083|Mus musculus domesticus DNA, BAC clone: B6Ng01-068I08, 5' end.DH887084|Mus musculus domesticus DNA, BAC clone: B6Ng01-068I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,702,941 - 148,703,954)(148,554,052 - 148,554,404)
sequence
gaattccctttggagattctgtttttctgaattttttttaattcaccaaa
aatagcttttaaatacttctaatcgaacagacagtaatattcaatcaaat
taatgctatctgtgtggcaattattagaatatctttgatcttagaaccaa
accttagaatgttaaaattttcttgccttcaaaatcaaagactagatgct
tttattcctactgtaatataaaatataaatattaaaattttatcaaaaaa
ttgaactcgcaaaaggaaattgtaaactttgacaagattttgataaaaat
ttaatttgttttcaaatatcttattatctaggaaatatataaaacataag
ctagctgctaatgtggtacccattttactagtgtctgaatggcaagccct
ggttgactgctgtgcttttacctctggactgtatctttaaaagactgttg
tatggattacaatgtagaaagatgtcagtccagagcttggagagttataa
ttcagctccaatcctgcctttacatgctagttgtacagctagtatatttc
ctctcttttttaaacttgggaacacgttccctctggagttagttaatcac
aaaaaatttcctttaaatgaaacaggtaaaatacaaacaaacaaaaaaaa
cctttgaagtgaagtttagttacttgcatgtaggaaacaatttctttcat
tattggttattgtccaacacatggatgtctctcttcttttgaccttaatt
tccttagtatctatttctttattgtgtgttatgtagatatgtgtgctatg
tagatgtgtgtactatgtttatcgtgtgttatgtagatgtgtgagctatg
tctgtgctatgtagatgtgtgttttgtagatgtatgtgttatgtagaagc
atgctatatagatgtgtgtgaatgtactgaatcagagattcgatacaaat
tatctttttctataatttcccacttttttaaaggtaagtctctcttctga
agctggaactctc
taaggcatggtaacatttccaacttggagatactgtttggaaaagtgcca
ccattgaagagacttgggagatgaatatttacaggagacagcactcagcc
aacccactccaataaacaccaaagagctaggttctgctagttacacaatc
tgcaaaataaagtgaattacttactacagtagccagtctacctgtaaaac
acaaatgcttaagtgttgtatgaattacacaggacacagcaggtccaagt
gctagagaagaatctcgaacggaataaaaggctagaattttaaggggttt
tacattattatcatcaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_148702941_148703954
seq2: B6Ng01-068I08.b_42_1054 (reverse)

seq1  GTGAGTTCCAGCTTCAG-AGAGAGACCTTACCTTTAAAAAAGTGGGAAAT  49
      | ||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  GAGAGTTCCAGCTTCAGAAGAGAGA-CTTACCTTTAAAAAAGTGGGAAAT  49

seq1  TATAGAAAAAGATAATTTGTATCGAATCTCTGATTACAGTACATTCACAC  99
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATAGAAAAAGATAATTTGTATCGAATCTCTGATT-CAGTACATTCACAC  98

seq1  ACATCTATATAGCATGCTTCTACATAACACATACATCTACAAAACACACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATATAGCATGCTTCTACATAACACATACATCTACAAAACACACA  148

seq1  TCTACATAGCACAGACATAGCTCACACATCTACATAACACACGATAAACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATAGCACAGACATAGCTCACACATCTACATAACACACGATAAACA  198

seq1  TAGTACACACATCTACATAGCACACATATCTACATAACACACAATAAAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACACACATCTACATAGCACACATATCTACATAACACACAATAAAGA  248

seq1  AATAGATACTAAGGAAATTAAGGTCAAAAGAAGAGAGACATCCATGTGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATACTAAGGAAATTAAGGTCAAAAGAAGAGAGACATCCATGTGTT  298

seq1  GGACAATAACCAATAATGAAAGAAATTGTTTCCTACATGCAAGTAACTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAATAACCAATAATGAAAGAAATTGTTTCCTACATGCAAGTAACTAA  348

seq1  ACTTCACTTCAAAGGTTTTTTTTGTTTGTTTGTATTTTACCTGTTTCATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACTTCAAAGGTTTTTTTTGTTTGTTTGTATTTTACCTGTTTCATT  398

seq1  TAAAGGAAATTTTTTGTGATTAACTAACTCCAGAGGGAACGTGTTCCCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAAATTTTTTGTGATTAACTAACTCCAGAGGGAACGTGTTCCCAA  448

seq1  GTTTAAAAAAGAGAGGAAATATACTAGCTGTACAACTAGCATGTAAAGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAAAAGAGAGGAAATATACTAGCTGTACAACTAGCATGTAAAGGC  498

seq1  AGGATTGGAGCTGAATTATAACTCTCCAAGCTCTGGACTGACATCTTTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGGAGCTGAATTATAACTCTCCAAGCTCTGGACTGACATCTTTCT  548

seq1  ACATTGTAATCCATACAACAGTCTTTTAAAGATACAGTCCAGAGGTAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTAATCCATACAACAGTCTTTTAAAGATACAGTCCAGAGGTAAAA  598

seq1  GCACAGCAGTCAACCAGGGCTTGCCATTCAGACACTAGTAAAATGGGTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCAGTCAACCAGGGCTTGCCATTCAGACACTAGTAAAATGGGTAC  648

seq1  CACATTAGCAGCTAGCTTATGTTTTATATATTTCCTAGATAATAAGATAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAGCAGCTAGCTTATGTTTTATATATTTCCTAGATAATAAGATAT  698

seq1  TTGAAAACAAATTAAATTTTTATCAAAATCTTGTCAAAGTTTACAATTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACAAATTAAATTTTTATCAAAATCTTGTCAAAGTTTACAATTTC  748

seq1  CTTTTGCGAGTTCAATTTTTTGATAAAATTTTAATATTTATATTTTATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCGAGTTCAATTTTTTGATAAAATTTTAATATTTATATTTTATAT  798

seq1  TACAGTAGGAATAAAAGCATCTAGTCTTTGATTTTGAAGGCAAGAAAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAGGAATAAAAGCATCTAGTCTTTGATTTTGAAGGCAAGAAAATT  848

seq1  TTAACATTCTAAGGTTTGGTTCTAAGATCAAAGATATTCTAATAATTGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATTCTAAGGTTTGGTTCTAAGATCAAAGATATTCTAATAATTGCC  898

seq1  ACACAGATAGCATTAATTTGATTGAATATTACTGTCTGTTCGATTAGAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGATAGCATTAATTTGATTGAATATTACTGTCTGTTCGATTAGAAG  948

seq1  TATTTAAAAGCTATTTTTGGTGAATTAAAAAAAATTCAGAAAAACAGAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAAGCTATTTTTGGTGAATTAAAAAAAATTCAGAAAAACAGAAT  998

seq1  CTCCAAAGGGAATTC  1014
      |||||||||||||||
seq2  CTCCAAAGGGAATTC  1013

seq1: chr3_148554052_148554404
seq2: B6Ng01-068I08.g_75_427

seq1  TAAGGCATGGTAACATTTCCAACTTGGAGATACTGTTTGGAAAAGTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCATGGTAACATTTCCAACTTGGAGATACTGTTTGGAAAAGTGCCA  50

seq1  CCATTGAAGAGACTTGGGAGATGAATATTTACAGGAGACAGCACTCAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGAAGAGACTTGGGAGATGAATATTTACAGGAGACAGCACTCAGCC  100

seq1  AACCCACTCCAATAAACACCAAAGAGCTAGGTTCTGCTAGTTACACAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACTCCAATAAACACCAAAGAGCTAGGTTCTGCTAGTTACACAATC  150

seq1  TGCAAAATAAAGTGAATTACTTACTACAGTAGCCAGTCTACCTGTAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATAAAGTGAATTACTTACTACAGTAGCCAGTCTACCTGTAAAAC  200

seq1  ACAAATGCTTAAGTGTTGTATGAATTACACAGGACACAGCAGGTCCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGCTTAAGTGTTGTATGAATTACACAGGACACAGCAGGTCCAAGT  250

seq1  GCTAGAGAAGAATCTCGAACGGAATAAAAGGCTAGAATTTTAAGGGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGAAGAATCTCGAACGGAATAAAAGGCTAGAATTTTAAGGGGTTT  300

seq1  TACATTATTATCATCAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTATTATCATCAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  350

seq1  GTG  353
      |||
seq2  GTG  353