BAC Information

Click to search

BAC

Clone NameB6Ng01-068L08
Chromosome3 (Build37)
Map Location 18,117,806 - 18,118,656
singlet/doubletsinglet
Overlap geneCyp7b1
Upstream geneEG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5
Downstream geneLOC622921, LOC100040153, Armc1, Mtfr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068L08.bB6Ng01-068L08.g
ACCDH887217DH887218
length1,05389
definitionDH887217|Mus musculus domesticus DNA, BAC clone: B6Ng01-068L08, 5' end.DH887218|Mus musculus domesticus DNA, BAC clone: B6Ng01-068L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaactgaggaataccgaatggctgagaagcacctttaaaaatg
tttaacatctttagtcgtcagggaaatgcaaatcaaaacaaccttgagat
tccacctcacaccagtcagaatggctaagaccaaacactctggtgacagc
agatgctggcaagaatgtaaaggaagaggaacacttcattgcttgtggga
ctgcaagctggtacaaccactctggaaatcagtttggtggttcctcagaa
aattggacatagtactacctgaggacccagctatacaactcctgggcata
tacccagaagatattccaactggtaataaggacgcatgctctactatatt
catagaagccttatttataatagccagaagctggaaagaacccagaatgg
atacagaaaatgtagtacatttacacaatggagtactattcagctattaa
aaacaatgaatttatgaaattcttagacaaatggatggatctggaggata
tcatcctgagtgcggtaacccaatcacaaaagaacacacatgatatgtac
tcactgctaagtggatattagcccagaagcttggaatatccaagatacaa
ttcgcaaagctcatgaaactcaagaaggaagaccaaaatgtgtatacttt
ggtccttcttagaaggagtaacaaaaagcccatggaagaagttaaagaga
caaggtgtatgacatttccatagctgtactcagagacagtgggatgcaga
ttgctagcactgggaggtgtagaaatgagagatgctcgccaaaaagtaca
cagtttcagttagaaaataagcaatttctataagtctaacattattagca
gtatttaataaatagggaattatatatacttgaaacttactgtgtaaaat
ctaaatattattacataagaactcatcatgaaagcaatgggcatgttaat
aagcatggttgtctaaacgattacaaactgcaacatcactgtgtgacatc
aaattatagtataattacctatttggtcttaaataaatatgtgtgtgtgt
gtg
agtttgtttgttttttttaaagcacataaagttggaattgaaaaatagag
gaggctgggatggagttagagggggaaggaatggggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18117806_18118656
seq2: B6Ng01-068L08.b_253_1099

seq1  GCTGGTACAACCACTCTGGAAATCAGTTTGGTGGTTCCTCAGAAAATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTACAACCACTCTGGAAATCAGTTTGGTGGTTCCTCAGAAAATTGG  50

seq1  ACATAGTACTACCTGAGGACCCAGCTATACAACTCCTGGGCATATACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTACTACCTGAGGACCCAGCTATACAACTCCTGGGCATATACCCA  100

seq1  GAAGATATTCCAACTGGTAATAAGGACGCATGCTCTACTATATTCATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATTCCAACTGGTAATAAGGACGCATGCTCTACTATATTCATAGA  150

seq1  AGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGAATGGATACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGAATGGATACAG  200

seq1  AAAATGTAGTACATTTACACAATGGAGTACTATTCAGCTATTAAAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTAGTACATTTACACAATGGAGTACTATTCAGCTATTAAAAACAA  250

seq1  TGAATTTATGAAATTCTTAGACAAATGGATGGATCTGGAGGATATCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTATGAAATTCTTAGACAAATGGATGGATCTGGAGGATATCATCC  300

seq1  TGAGTGCGGTAACCCAATCACAAAAGAACACACATGATATGTACTCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCGGTAACCCAATCACAAAAGAACACACATGATATGTACTCACTG  350

seq1  CTAAGTGGATATTAGCCCAGAAGCTTGGAATATCCAAGATACAATTCGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGGATATTAGCCCAGAAGCTTGGAATATCCAAGATACAATTCGCA  400

seq1  AAGCTCATGAAACTCAAGAAGGAAGACCAAAATGTGTATACTTTGGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCATGAAACTCAAGAAGGAAGACCAAAATGTGTATACTTTGGTCCT  450

seq1  TCTTAGAAGGAGTAACAAAAAGCCCATGGAAGAAGTTAAAGAGACAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAGGAGTAACAAAAAGCCCATGGAAGAAGTTAAAGAGACAAGGT  500

seq1  GTATGACATTTCCATAGCTGTACTCAGAGACAGTGGGATGCAGATTGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACATTTCCATAGCTGTACTCAGAGACAGTGGGATGCAGATTGCTA  550

seq1  GCACTGGGAGGTGTAGAAATGAGAGATGCTCGCCAAAAAGTACACAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGGAGGTGTAGAAATGAGAGATGCTCGCCAAAAAGTACACAGTTT  600

seq1  CAGTTAGAAAATAAGCAATTTCTATAAGTCTAACATTATTAGCAGTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGAAAATAAGCAATTTCTATAAGTCTAACATTATTAGCAGTATTT  650

seq1  AAT-AATAGGGAATTATATATACTTGAAACTTACTGTGTAAAATCTAAAT  699
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAGGGAATTATATATACTTGAAACTTACTGTGTAAAATCTAAAT  700

seq1  ATTATTACATTAAGAACTCATCATGAAGGCAATGGGCATGTTAATAAGCA  749
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  ATTATTACA-TAAGAACTCATCATGAAAGCAATGGGCATGTTAATAAGCA  749

seq1  TGGTTGTCTAAACGATTACAAAACTGCAACATCACTGTGTGACATCAAAT  799
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGGTTGTCTAAACGATTAC-AAACTGCAACATCACTGTGTGACATCAAAT  798

seq1  ATATAGTATTAATTACCTATTTGTTCTTTATATATATATGTGTGTGTGTG  849
       ||||||| |||||||||||||| || ||| ||| |||||||||||||||
seq2  -TATAGTA-TAATTACCTATTTGGTC-TTAAATAAATATGTGTGTGTGTG  845

seq1  TG  851
      ||
seq2  TG  847